Wall clock time and date at job start Mon Mar 8 2021 04:10:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42906 * 113.99586 * 2 1 4 4 H 1.08992 * 112.85380 * 18.79713 * 3 2 1 5 5 C 1.53785 * 113.61373 * 149.99730 * 3 2 1 6 6 C 1.53781 * 87.08021 * 139.97623 * 5 3 2 7 7 H 1.09002 * 113.61190 * 89.20162 * 6 5 3 8 8 N 1.46506 * 113.61132 * 220.01631 * 6 5 3 9 9 C 1.34771 * 119.99507 * 204.99872 * 8 6 5 10 10 O 1.21695 * 120.00787 * 0.28323 * 9 8 6 11 11 C 1.46686 * 119.99603 * 180.02562 * 9 8 6 12 12 C 1.37868 * 126.23025 * 179.97438 * 11 9 8 13 13 C 1.50696 * 126.46133 * 359.97438 * 12 11 9 14 14 C 1.39834 * 107.08344 * 180.02562 * 12 11 9 15 15 C 1.35454 * 107.86667 * 0.02562 * 14 12 11 16 16 C 1.50695 * 125.56581 * 180.02562 * 15 14 12 17 17 O 1.42902 * 109.47124 * 120.02844 * 16 15 14 18 18 Si 1.86303 * 109.47337 * 0.02651 * 16 15 14 19 19 N 1.35540 * 108.86732 * 359.73227 * 15 14 12 20 20 C 1.53782 * 87.08269 * 334.56633 * 6 5 3 21 21 H 1.09004 * 109.46739 * 60.00756 * 1 2 3 22 22 H 1.08996 * 109.47144 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47445 * 300.00968 * 1 2 3 24 24 H 1.09002 * 113.61330 * 25.42436 * 5 3 2 25 25 H 1.08996 * 113.68884 * 254.53812 * 5 3 2 26 26 H 0.96999 * 120.00080 * 25.00472 * 8 6 5 27 27 H 1.09001 * 109.47616 * 89.99650 * 13 12 11 28 28 H 1.09001 * 109.47624 * 209.99594 * 13 12 11 29 29 H 1.09003 * 109.47299 * 329.99936 * 13 12 11 30 30 H 1.07999 * 126.06945 * 180.02562 * 14 12 11 31 31 H 1.09004 * 109.47290 * 240.02534 * 16 15 14 32 32 H 0.96700 * 113.99997 * 299.99756 * 17 16 15 33 33 H 1.48497 * 110.00164 * 180.02562 * 18 16 15 34 34 H 1.48500 * 109.99813 * 301.32062 * 18 16 15 35 35 H 0.97001 * 125.67512 * 180.29670 * 19 15 14 36 36 H 1.09002 * 113.61384 * 139.98191 * 20 6 5 37 37 H 1.09000 * 113.61096 * 270.88612 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 1 1.3137 2.0789 0.3236 5 6 3.3755 1.3721 0.7046 6 6 3.8227 2.3182 -0.4222 7 1 3.6235 3.3695 -0.2143 8 7 5.1935 2.0787 -0.8802 9 6 5.8950 3.0746 -1.4567 10 8 5.3917 4.1743 -1.5922 11 6 7.2674 2.8346 -1.9157 12 6 8.0973 3.7551 -2.5196 13 6 7.7651 5.1916 -2.8310 14 6 9.3051 3.1042 -2.7896 15 6 9.1942 1.8257 -2.3562 16 6 10.2673 0.7720 -2.4505 17 8 10.6008 0.3131 -1.1389 18 14 11.7812 1.4979 -3.2580 19 7 7.9626 1.6506 -1.8181 20 6 2.7535 1.6489 -1.3018 21 1 -0.3633 0.5137 -0.8901 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3634 0.5140 0.8899 24 1 3.9088 0.4215 0.7140 25 1 3.3396 1.8469 1.6850 26 1 5.5962 1.2033 -0.7685 27 1 8.0421 5.8204 -1.9848 28 1 8.3176 5.5089 -3.7155 29 1 6.6953 5.2849 -3.0180 30 1 10.1725 3.5430 -3.2603 31 1 9.9035 -0.0649 -3.0466 32 1 10.9325 1.0065 -0.5521 33 1 12.8469 0.4685 -3.3574 34 1 11.4403 2.0076 -4.6105 35 1 7.6264 0.8275 -1.4303 36 1 2.2141 2.3476 -1.9413 37 1 3.1168 0.7739 -1.8409 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:35 Heat of formation + Delta-G solvation = -42.116646 kcal Electronic energy + Delta-G solvation = -20255.747104 eV Core-core repulsion = 17001.384015 eV Total energy + Delta-G solvation = -3254.363089 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.58626 -41.02514 -39.53895 -37.82244 -37.27486 -34.49368 -33.31718 -31.59560 -28.18492 -27.97762 -27.08177 -26.83184 -24.84966 -22.42928 -21.63379 -21.31276 -20.23996 -19.45597 -18.26112 -18.09234 -16.92555 -16.79318 -16.48783 -16.28390 -15.95999 -15.70966 -15.42547 -15.13025 -14.82734 -14.63843 -14.31432 -13.89924 -13.60320 -13.57395 -13.49293 -13.44753 -12.92986 -12.83252 -12.26036 -12.22430 -12.15772 -12.01500 -11.93363 -10.97508 -10.73657 -10.55392 -10.16345 -9.81152 -9.14893 -5.06410 0.37008 1.11161 1.52685 1.63929 1.84019 1.97726 2.15744 2.35327 2.83445 3.26976 3.33201 3.44562 3.51136 3.70681 3.74987 3.84539 4.15709 4.18806 4.22410 4.35035 4.39497 4.40582 4.60027 4.60963 4.70735 4.74982 4.81974 4.83747 4.89094 4.95985 5.03738 5.22499 5.34669 5.46658 5.66395 5.91467 6.15340 6.24483 6.36036 6.44417 7.13944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.145 4.145 6 C 0.127 3.873 7 H 0.123 0.877 8 N -0.721 5.721 9 C 0.592 3.408 10 O -0.522 6.522 11 C -0.058 4.058 12 C -0.063 4.063 13 C -0.093 4.093 14 C -0.201 4.201 15 C 0.027 3.973 16 C -0.056 4.056 17 O -0.544 6.544 18 Si 0.722 3.278 19 N -0.524 5.524 20 C -0.169 4.169 21 H 0.043 0.957 22 H 0.087 0.913 23 H 0.044 0.956 24 H 0.095 0.905 25 H 0.083 0.917 26 H 0.396 0.604 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.080 0.920 30 H 0.150 0.850 31 H 0.115 0.885 32 H 0.383 0.617 33 H -0.253 1.253 34 H -0.253 1.253 35 H 0.416 0.584 36 H 0.077 0.923 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.667 -0.493 1.860 2.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.183 4.183 6 C 0.022 3.978 7 H 0.141 0.859 8 N -0.371 5.371 9 C 0.381 3.619 10 O -0.397 6.397 11 C -0.171 4.171 12 C -0.071 4.071 13 C -0.150 4.150 14 C -0.226 4.226 15 C -0.092 4.092 16 C -0.166 4.166 17 O -0.349 6.349 18 Si 0.621 3.379 19 N -0.120 5.120 20 C -0.208 4.208 21 H 0.062 0.938 22 H 0.105 0.895 23 H 0.062 0.938 24 H 0.114 0.886 25 H 0.102 0.898 26 H 0.229 0.771 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.099 0.901 30 H 0.168 0.832 31 H 0.133 0.867 32 H 0.231 0.769 33 H -0.178 1.178 34 H -0.177 1.177 35 H 0.254 0.746 36 H 0.096 0.904 37 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.654 -0.592 0.918 1.274 hybrid contribution -0.860 -1.127 0.225 1.435 sum -0.205 -1.719 1.143 2.075 Atomic orbital electron populations 1.22835 0.80674 1.03091 1.00193 1.87939 1.20084 1.26850 1.94560 1.23450 0.93730 0.85850 0.96393 0.88807 1.23633 0.95767 1.00317 0.98565 1.22232 0.80047 1.00713 0.94845 0.85948 1.45803 1.15173 1.13881 1.62266 1.17061 0.83361 0.84390 0.77137 1.90834 1.69868 1.23233 1.55813 1.20223 0.94312 0.87625 1.14896 1.19940 0.92424 0.95977 0.98794 1.20394 1.03333 0.89936 1.01368 1.20610 0.99652 0.92792 1.09537 1.21102 0.87457 0.97144 1.03463 1.24976 1.02432 0.98537 0.90631 1.86499 1.86838 1.39017 1.22562 0.93996 0.76774 0.84942 0.82169 1.41851 1.11872 1.11495 1.46829 1.24024 0.97481 1.01420 0.97847 0.93811 0.89453 0.93750 0.88628 0.89804 0.77053 0.91092 0.91646 0.90082 0.83206 0.86737 0.76870 1.17815 1.17685 0.74596 0.90404 0.88854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.51 10.71 -35.23 -0.38 -0.89 16 3 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.14 0.19 7.66 -25.92 -0.20 -0.01 16 6 C 0.13 -0.03 4.24 -67.11 -0.28 -0.32 16 7 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 8 N -0.72 0.13 5.35 -54.32 -0.29 -0.16 16 9 C 0.59 1.59 7.79 -12.85 -0.10 1.49 16 10 O -0.52 -3.01 14.40 5.19 0.07 -2.93 16 11 C -0.06 -0.11 7.06 -81.98 -0.58 -0.69 16 12 C -0.06 -0.14 6.21 -104.16 -0.65 -0.78 16 13 C -0.09 -0.16 9.83 36.00 0.35 0.19 16 14 C -0.20 -0.09 9.27 -39.98 -0.37 -0.46 16 15 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 16 C -0.06 0.08 3.08 36.00 0.11 0.19 16 17 O -0.54 0.71 12.88 -35.23 -0.45 0.25 16 18 Si 0.72 -1.52 30.54 -169.99 -5.19 -6.71 16 19 N -0.52 0.23 5.99 -5.70 -0.03 0.20 16 20 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.10 -0.14 8.12 -51.93 -0.42 -0.56 16 25 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.40 -0.98 7.86 -40.82 -0.32 -1.30 16 27 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.08 0.28 6.49 -51.93 -0.34 -0.06 16 30 H 0.15 -0.23 6.17 -52.49 -0.32 -0.55 16 31 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 32 H 0.38 -1.82 8.70 45.56 0.40 -1.43 16 33 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 34 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 35 H 0.42 -1.11 8.19 -40.82 -0.33 -1.44 16 36 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 312.51 15.07 4.71 4.71 Total: 0.00 -7.53 312.51 -8.15 -15.68 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -5.13 Total: -9.98 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -1.46 Total: -0.17 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.32 Total: 0.04 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.76 Total: -3.57 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.19 Total: -6.71 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -7.53 -8.15 -15.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.432 kcal (2) G-P(sol) polarization free energy of solvation -7.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds