Wall clock time and date at job start Mon Mar 8 2021 04:10:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42906 * 113.99586 * 2 1 4 4 H 1.08992 * 112.85380 * 18.79713 * 3 2 1 5 5 C 1.53785 * 113.61373 * 149.99730 * 3 2 1 6 6 C 1.53781 * 87.08021 * 139.97623 * 5 3 2 7 7 H 1.09002 * 113.61190 * 89.20162 * 6 5 3 8 8 N 1.46506 * 113.61132 * 220.01631 * 6 5 3 9 9 C 1.34771 * 119.99507 * 204.99872 * 8 6 5 10 10 O 1.21695 * 120.00787 * 0.28323 * 9 8 6 11 11 C 1.46686 * 119.99603 * 180.02562 * 9 8 6 12 12 C 1.37868 * 126.23025 * 179.97438 * 11 9 8 13 13 C 1.50696 * 126.46133 * 359.97438 * 12 11 9 14 14 C 1.39834 * 107.08344 * 180.02562 * 12 11 9 15 15 C 1.35454 * 107.86667 * 0.02562 * 14 12 11 16 16 C 1.50695 * 125.56581 * 180.02562 * 15 14 12 17 17 O 1.42902 * 109.47124 * 120.02844 * 16 15 14 18 18 Si 1.86303 * 109.47337 * 0.02651 * 16 15 14 19 19 N 1.35540 * 108.86732 * 359.73227 * 15 14 12 20 20 C 1.53782 * 87.08269 * 334.56633 * 6 5 3 21 21 H 1.09004 * 109.46739 * 60.00756 * 1 2 3 22 22 H 1.08996 * 109.47144 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47445 * 300.00968 * 1 2 3 24 24 H 1.09002 * 113.61330 * 25.42436 * 5 3 2 25 25 H 1.08996 * 113.68884 * 254.53812 * 5 3 2 26 26 H 0.96999 * 120.00080 * 25.00472 * 8 6 5 27 27 H 1.09001 * 109.47616 * 89.99650 * 13 12 11 28 28 H 1.09001 * 109.47624 * 209.99594 * 13 12 11 29 29 H 1.09003 * 109.47299 * 329.99936 * 13 12 11 30 30 H 1.07999 * 126.06945 * 180.02562 * 14 12 11 31 31 H 1.09004 * 109.47290 * 240.02534 * 16 15 14 32 32 H 0.96700 * 113.99997 * 299.99756 * 17 16 15 33 33 H 1.48497 * 110.00164 * 180.02562 * 18 16 15 34 34 H 1.48500 * 109.99813 * 301.32062 * 18 16 15 35 35 H 0.97001 * 125.67512 * 180.29670 * 19 15 14 36 36 H 1.09002 * 113.61384 * 139.98191 * 20 6 5 37 37 H 1.09000 * 113.61096 * 270.88612 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 1 1.3137 2.0789 0.3236 5 6 3.3755 1.3721 0.7046 6 6 3.8227 2.3182 -0.4222 7 1 3.6235 3.3695 -0.2143 8 7 5.1935 2.0787 -0.8802 9 6 5.8950 3.0746 -1.4567 10 8 5.3917 4.1743 -1.5922 11 6 7.2674 2.8346 -1.9157 12 6 8.0973 3.7551 -2.5196 13 6 7.7651 5.1916 -2.8310 14 6 9.3051 3.1042 -2.7896 15 6 9.1942 1.8257 -2.3562 16 6 10.2673 0.7720 -2.4505 17 8 10.6008 0.3131 -1.1389 18 14 11.7812 1.4979 -3.2580 19 7 7.9626 1.6506 -1.8181 20 6 2.7535 1.6489 -1.3018 21 1 -0.3633 0.5137 -0.8901 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3634 0.5140 0.8899 24 1 3.9088 0.4215 0.7140 25 1 3.3396 1.8469 1.6850 26 1 5.5962 1.2033 -0.7685 27 1 8.0421 5.8204 -1.9848 28 1 8.3176 5.5089 -3.7155 29 1 6.6953 5.2849 -3.0180 30 1 10.1725 3.5430 -3.2603 31 1 9.9035 -0.0649 -3.0466 32 1 10.9325 1.0065 -0.5521 33 1 12.8469 0.4685 -3.3574 34 1 11.4403 2.0076 -4.6105 35 1 7.6264 0.8275 -1.4303 36 1 2.2141 2.3476 -1.9413 37 1 3.1168 0.7739 -1.8409 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:35 Heat of formation + Delta-G solvation = -43.495998 kcal Electronic energy + Delta-G solvation = -20255.806917 eV Core-core repulsion = 17001.384015 eV Total energy + Delta-G solvation = -3254.422902 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.62597 -41.05604 -39.64567 -37.72026 -37.31392 -34.57609 -33.39350 -31.59631 -28.24362 -27.93017 -27.08184 -26.79132 -24.84493 -22.49894 -21.63016 -21.33412 -20.28557 -19.48048 -18.26593 -18.04634 -16.90379 -16.81028 -16.53542 -16.27184 -15.96352 -15.71185 -15.42375 -15.17782 -14.83157 -14.68897 -14.32254 -13.90654 -13.63673 -13.57283 -13.54268 -13.47723 -12.99731 -12.79973 -12.24443 -12.20167 -12.16836 -12.00290 -11.90297 -11.12583 -10.67603 -10.53370 -10.25466 -9.83557 -9.20985 -4.91276 0.27548 1.22572 1.51267 1.72326 1.89172 1.96831 2.20381 2.21225 2.88844 3.36116 3.46157 3.47787 3.55722 3.72674 3.77242 3.85739 4.12592 4.21326 4.27641 4.41449 4.47872 4.51347 4.64500 4.65702 4.70470 4.79255 4.81543 4.87358 4.89340 4.91197 4.96259 5.15300 5.30949 5.39065 5.61944 5.84287 6.20360 6.28051 6.44203 6.66709 7.01934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.062 3.938 4 H 0.106 0.894 5 C -0.134 4.134 6 C 0.124 3.876 7 H 0.112 0.888 8 N -0.708 5.708 9 C 0.589 3.411 10 O -0.561 6.561 11 C -0.073 4.073 12 C -0.084 4.084 13 C -0.090 4.090 14 C -0.208 4.208 15 C 0.035 3.965 16 C -0.055 4.055 17 O -0.554 6.554 18 Si 0.804 3.196 19 N -0.514 5.514 20 C -0.168 4.168 21 H 0.047 0.953 22 H 0.092 0.908 23 H 0.053 0.947 24 H 0.100 0.900 25 H 0.093 0.907 26 H 0.408 0.592 27 H 0.072 0.928 28 H 0.078 0.922 29 H 0.059 0.941 30 H 0.168 0.832 31 H 0.116 0.884 32 H 0.399 0.601 33 H -0.294 1.294 34 H -0.285 1.285 35 H 0.427 0.573 36 H 0.072 0.928 37 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.133 -1.160 2.440 2.930 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.316 6.316 3 C 0.004 3.996 4 H 0.124 0.876 5 C -0.172 4.172 6 C 0.020 3.980 7 H 0.129 0.871 8 N -0.358 5.358 9 C 0.378 3.622 10 O -0.439 6.439 11 C -0.186 4.186 12 C -0.093 4.093 13 C -0.147 4.147 14 C -0.232 4.232 15 C -0.085 4.085 16 C -0.165 4.165 17 O -0.362 6.362 18 Si 0.708 3.292 19 N -0.112 5.112 20 C -0.207 4.207 21 H 0.065 0.935 22 H 0.111 0.889 23 H 0.072 0.928 24 H 0.118 0.882 25 H 0.112 0.888 26 H 0.244 0.756 27 H 0.090 0.910 28 H 0.097 0.903 29 H 0.078 0.922 30 H 0.185 0.815 31 H 0.133 0.867 32 H 0.249 0.751 33 H -0.222 1.222 34 H -0.212 1.212 35 H 0.266 0.734 36 H 0.090 0.910 37 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.102 -1.292 1.541 2.294 hybrid contribution -0.990 -0.974 0.024 1.389 sum 0.112 -2.266 1.565 2.756 Atomic orbital electron populations 1.22964 0.79764 1.03722 1.00849 1.87902 1.21249 1.27774 1.94663 1.23553 0.94259 0.85670 0.96108 0.87638 1.23573 0.95071 1.00099 0.98470 1.22214 0.79864 1.00441 0.95528 0.87056 1.45709 1.15055 1.13924 1.61148 1.17241 0.83768 0.84251 0.76949 1.90810 1.70756 1.24788 1.57593 1.20144 0.94195 0.88551 1.15709 1.20182 0.93413 0.96259 0.99415 1.20341 1.02076 0.90283 1.02026 1.20839 0.99696 0.93003 1.09695 1.21316 0.87493 0.97184 1.02462 1.25071 1.02241 0.98245 0.90930 1.86475 1.86905 1.40127 1.22704 0.92970 0.73868 0.82556 0.79764 1.41821 1.11643 1.11297 1.46394 1.23991 0.97596 1.01029 0.98055 0.93457 0.88919 0.92800 0.88208 0.88825 0.75614 0.90972 0.90310 0.92220 0.81504 0.86685 0.75058 1.22205 1.21160 0.73374 0.90963 0.89342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.18 16 2 O -0.40 -1.03 10.71 -148.98 -1.60 -2.63 16 3 C 0.06 -0.06 4.31 31.12 0.13 0.07 16 4 H 0.11 -0.38 7.87 -2.39 -0.02 -0.40 16 5 C -0.13 0.39 7.66 31.12 0.24 0.63 16 6 C 0.12 0.01 4.24 45.52 0.19 0.20 16 7 H 0.11 0.30 7.46 -2.39 -0.02 0.29 16 8 N -0.71 -0.10 5.35 -443.98 -2.38 -2.48 16 9 C 0.59 3.83 7.79 86.45 0.67 4.50 16 10 O -0.56 -7.59 14.40 -4.33 -0.06 -7.65 16 11 C -0.07 -0.31 7.06 40.35 0.28 -0.03 16 12 C -0.08 -0.41 6.21 -19.57 -0.12 -0.53 16 13 C -0.09 -0.42 9.83 71.23 0.70 0.27 16 14 C -0.21 -0.08 9.27 22.01 0.20 0.12 16 15 C 0.03 -0.05 6.47 41.34 0.27 0.22 16 16 C -0.06 0.22 3.08 71.23 0.22 0.44 16 17 O -0.55 2.22 12.88 -148.98 -1.92 0.30 16 18 Si 0.80 -3.86 30.54 68.60 2.10 -1.77 16 19 N -0.51 0.67 5.99 -171.93 -1.03 -0.36 16 20 C -0.17 -0.06 7.71 31.12 0.24 0.18 16 21 H 0.05 -0.13 8.14 -2.38 -0.02 -0.15 16 22 H 0.09 -0.32 8.14 -2.39 -0.02 -0.33 16 23 H 0.05 -0.22 8.14 -2.39 -0.02 -0.23 16 24 H 0.10 -0.35 8.12 -2.39 -0.02 -0.37 16 25 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 26 H 0.41 -2.08 7.86 -92.71 -0.73 -2.81 16 27 H 0.07 0.28 8.14 -2.39 -0.02 0.26 16 28 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 29 H 0.06 0.55 6.49 -2.39 -0.02 0.53 16 30 H 0.17 -0.67 6.17 -2.91 -0.02 -0.68 16 31 H 0.12 -0.44 7.96 -2.38 -0.02 -0.45 16 32 H 0.40 -4.45 8.70 -74.06 -0.64 -5.10 16 33 H -0.29 -0.65 7.11 99.48 0.71 0.06 16 34 H -0.29 -0.21 7.11 99.48 0.71 0.50 16 35 H 0.43 -2.59 8.19 -92.71 -0.76 -3.35 16 36 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 Total: 0.00 -18.16 312.51 -1.61 -19.77 By element: Atomic # 1 Polarization: -11.47 SS G_CDS: -0.98 Total: -12.45 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 4.26 Total: 7.27 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -3.41 Total: -2.84 kcal Atomic # 8 Polarization: -6.40 SS G_CDS: -3.58 Total: -9.98 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.10 Total: -1.77 kcal Total: -18.16 -1.61 -19.77 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.725 kcal (2) G-P(sol) polarization free energy of solvation -18.164 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.771 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds