Wall clock time and date at job start Mon Mar 8 2021 04:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42899 * 113.99778 * 2 1 4 4 H 1.08995 * 112.84990 * 341.19195 * 3 2 1 5 5 C 1.53778 * 113.61691 * 112.50136 * 3 2 1 6 6 C 1.53780 * 87.08421 * 139.97596 * 5 3 2 7 7 H 1.09007 * 113.68399 * 89.12921 * 6 5 3 8 8 N 1.46498 * 113.61841 * 220.01633 * 6 5 3 9 9 C 1.34772 * 120.00016 * 252.50162 * 8 6 5 10 10 O 1.21272 * 120.00289 * 359.97438 * 9 8 6 11 11 C 1.50701 * 119.99683 * 180.02562 * 9 8 6 12 12 C 1.50694 * 109.47190 * 180.02562 * 11 9 8 13 13 C 1.34846 * 125.89535 * 85.02377 * 12 11 9 14 14 C 1.40890 * 107.42058 * 180.02562 * 13 12 11 15 15 C 1.34850 * 107.41766 * 359.97438 * 14 13 12 16 16 C 1.50695 * 125.89129 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.47198 * 244.97736 * 16 15 14 18 18 Si 1.86304 * 109.47428 * 4.97612 * 16 15 14 19 19 N 1.36349 * 108.21757 * 359.73872 * 15 14 13 20 20 C 1.53783 * 113.61104 * 209.99900 * 3 2 1 21 21 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 22 22 H 1.09000 * 109.47187 * 300.00233 * 1 2 3 23 23 H 1.09001 * 109.46558 * 60.00281 * 1 2 3 24 24 H 1.09003 * 113.61548 * 254.53075 * 5 3 2 25 25 H 1.09011 * 113.61419 * 25.43051 * 5 3 2 26 26 H 0.97003 * 119.99606 * 72.50268 * 8 6 5 27 27 H 1.09000 * 109.47002 * 299.99836 * 11 9 8 28 28 H 1.09000 * 109.47400 * 59.99477 * 11 9 8 29 29 H 1.08001 * 126.29385 * 0.02562 * 13 12 11 30 30 H 1.08004 * 126.29332 * 180.02562 * 14 13 12 31 31 H 1.09003 * 109.47477 * 124.97798 * 16 15 14 32 32 H 0.96701 * 113.99934 * 180.02562 * 17 16 15 33 33 H 1.48501 * 109.99960 * 178.68053 * 18 16 15 34 34 H 1.48504 * 109.99732 * 299.99944 * 18 16 15 35 35 H 0.96993 * 125.63376 * 180.26378 * 19 15 14 36 36 H 1.08998 * 113.61221 * 334.56248 * 20 3 2 37 37 H 1.09001 * 113.61718 * 105.47132 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8227 2.3182 0.4222 7 1 3.6235 3.3695 0.2143 8 7 5.1935 2.0787 0.8804 9 6 5.8950 3.0747 1.4568 10 8 5.3917 4.1693 1.5959 11 6 7.3052 2.8285 1.9276 12 6 7.8614 4.0926 2.5306 13 6 7.6937 4.5012 3.8046 14 6 8.3742 5.7265 3.9477 15 6 8.9325 6.0197 2.7557 16 6 9.7583 7.2410 2.4434 17 8 9.0729 8.0464 1.4823 18 14 10.0244 8.2260 4.0022 19 7 8.6264 5.0174 1.8835 20 6 3.3756 1.3719 -0.7045 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3632 0.5138 -0.8900 24 1 2.2140 2.3478 1.9411 25 1 3.1166 0.7741 1.8411 26 1 5.5962 1.2033 0.7688 27 1 7.3049 2.0380 2.6781 28 1 7.9231 2.5263 1.0820 29 1 7.1394 3.9843 4.5740 30 1 8.4379 6.3212 4.8470 31 1 10.7226 6.9339 2.0386 32 1 9.5477 8.8513 1.2334 33 1 10.8642 9.4163 3.7137 34 1 8.7170 8.6508 4.5640 35 1 8.9044 4.9714 0.9554 36 1 3.9088 0.4213 -0.7136 37 1 3.3385 1.8470 -1.6848 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:38 Heat of formation + Delta-G solvation = -36.190171 kcal Electronic energy + Delta-G solvation = -19860.135295 eV Core-core repulsion = 16606.029197 eV Total energy + Delta-G solvation = -3254.106098 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.21123 -41.09236 -39.65872 -37.76208 -37.23060 -34.21669 -32.93351 -31.79567 -29.50785 -27.83253 -26.81254 -25.57648 -24.35594 -21.80888 -21.26199 -21.17313 -20.73376 -18.54688 -18.37916 -18.09961 -17.81774 -16.86051 -16.40161 -16.12492 -16.00258 -15.75366 -15.23105 -14.97524 -14.74735 -14.46892 -14.20805 -13.87479 -13.80987 -13.54371 -13.33997 -13.21117 -12.88306 -12.81019 -12.39555 -12.19958 -12.15025 -11.89493 -11.79167 -10.80982 -10.55595 -10.51117 -10.02460 -9.63927 -8.82350 -4.86830 1.15071 1.35115 1.66324 1.67048 1.94298 2.06634 2.30186 2.54086 2.89931 3.39005 3.39135 3.49175 3.67783 3.77087 3.81329 3.97444 4.00062 4.07489 4.26277 4.28080 4.40568 4.42324 4.43760 4.65112 4.66482 4.66737 4.73685 4.88103 4.90840 4.93577 5.04334 5.38423 5.45015 5.49447 6.14091 6.19135 6.27211 6.42498 6.47934 6.73180 7.26390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.168 4.168 6 C 0.125 3.875 7 H 0.117 0.883 8 N -0.721 5.721 9 C 0.511 3.489 10 O -0.521 6.521 11 C -0.072 4.072 12 C 0.037 3.963 13 C -0.172 4.172 14 C -0.183 4.183 15 C 0.036 3.964 16 C -0.056 4.056 17 O -0.541 6.541 18 Si 0.712 3.288 19 N -0.537 5.537 20 C -0.144 4.144 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.075 0.925 25 H 0.095 0.905 26 H 0.403 0.597 27 H 0.118 0.882 28 H 0.100 0.900 29 H 0.137 0.863 30 H 0.142 0.858 31 H 0.071 0.929 32 H 0.380 0.620 33 H -0.262 1.262 34 H -0.252 1.252 35 H 0.411 0.589 36 H 0.097 0.903 37 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.591 -3.876 -0.818 4.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.207 4.207 6 C 0.019 3.981 7 H 0.135 0.865 8 N -0.373 5.373 9 C 0.297 3.703 10 O -0.396 6.396 11 C -0.112 4.112 12 C -0.077 4.077 13 C -0.197 4.197 14 C -0.208 4.208 15 C -0.077 4.077 16 C -0.165 4.165 17 O -0.348 6.348 18 Si 0.611 3.389 19 N -0.131 5.131 20 C -0.182 4.182 21 H 0.106 0.894 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.094 0.906 25 H 0.113 0.887 26 H 0.237 0.763 27 H 0.136 0.864 28 H 0.118 0.882 29 H 0.155 0.845 30 H 0.159 0.841 31 H 0.089 0.911 32 H 0.228 0.772 33 H -0.188 1.188 34 H -0.176 1.176 35 H 0.248 0.752 36 H 0.115 0.885 37 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.828 -2.943 -0.408 3.489 hybrid contribution -0.077 0.336 -1.646 1.682 sum 1.751 -2.607 -2.054 3.753 Atomic orbital electron populations 1.22832 0.80738 1.03063 1.00157 1.87936 1.20021 1.26874 1.94572 1.23459 0.93743 0.85771 0.96558 0.88997 1.24013 0.97492 1.01424 0.97766 1.22180 0.80709 1.00378 0.94797 0.86466 1.45910 1.14795 1.14379 1.62216 1.20663 0.87794 0.84450 0.77399 1.90778 1.70886 1.23832 1.54081 1.20132 0.92977 0.95620 1.02495 1.19445 1.01289 0.93793 0.93160 1.20569 1.05387 0.98085 0.95652 1.20614 1.03773 0.99420 0.97021 1.19539 1.06201 0.91162 0.90797 1.24502 0.95357 0.93204 1.03411 1.86634 1.49522 1.38072 1.60580 0.94479 0.83040 0.80955 0.80431 1.41765 1.41545 1.17700 1.12131 1.23628 0.95749 1.00399 0.98451 0.89448 0.93825 0.93827 0.90597 0.88671 0.76270 0.86367 0.88175 0.84467 0.84085 0.91116 0.77210 1.18766 1.17604 0.75231 0.88460 0.90067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.56 10.71 -35.23 -0.38 -0.93 16 3 C 0.06 -0.01 4.31 -25.92 -0.11 -0.12 16 4 H 0.09 -0.11 7.87 -51.93 -0.41 -0.52 16 5 C -0.17 0.00 7.71 -25.92 -0.20 -0.20 16 6 C 0.12 -0.01 4.24 -67.12 -0.28 -0.29 16 7 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 8 N -0.72 0.67 5.35 -53.02 -0.28 0.39 16 9 C 0.51 0.83 7.82 -10.99 -0.09 0.75 16 10 O -0.52 -3.49 15.63 5.56 0.09 -3.41 16 11 C -0.07 0.08 6.24 -29.04 -0.18 -0.10 16 12 C 0.04 0.08 5.66 -81.79 -0.46 -0.38 16 13 C -0.17 -0.56 10.76 -39.78 -0.43 -0.99 16 14 C -0.18 -0.61 9.37 -39.78 -0.37 -0.98 16 15 C 0.04 0.11 6.53 -81.79 -0.53 -0.42 16 16 C -0.06 -0.06 3.07 36.00 0.11 0.05 16 17 O -0.54 -1.34 12.86 -35.23 -0.45 -1.79 16 18 Si 0.71 -0.05 30.60 -169.99 -5.20 -5.25 16 19 N -0.54 -1.21 6.08 -5.44 -0.03 -1.25 16 20 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 21 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.09 0.02 8.14 -51.92 -0.42 -0.41 16 26 H 0.40 -1.53 8.73 -40.82 -0.36 -1.88 16 27 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 28 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.14 0.25 8.06 -52.49 -0.42 -0.17 16 30 H 0.14 0.23 6.24 -52.48 -0.33 -0.10 16 31 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 32 H 0.38 -0.71 8.74 45.56 0.40 -0.31 16 33 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 34 H -0.25 -0.90 7.11 56.52 0.40 -0.49 16 35 H 0.41 0.13 8.96 -40.82 -0.37 -0.24 16 36 H 0.10 -0.15 8.12 -51.93 -0.42 -0.57 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 316.96 15.07 4.78 4.78 Total: 0.00 -10.12 316.96 -8.42 -18.55 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -5.28 Total: -9.44 kcal Atomic # 6 Polarization: 0.01 SS G_CDS: -1.65 Total: -1.64 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.32 Total: -0.86 kcal Atomic # 8 Polarization: -5.39 SS G_CDS: -0.74 Total: -6.13 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.20 Total: -5.25 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -10.12 -8.42 -18.55 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.643 kcal (2) G-P(sol) polarization free energy of solvation -10.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds