Wall clock time and date at job start Mon Mar 8 2021 04:10:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42899 * 113.99778 * 2 1 4 4 H 1.08995 * 112.84990 * 341.19195 * 3 2 1 5 5 C 1.53778 * 113.61691 * 112.50136 * 3 2 1 6 6 C 1.53780 * 87.08421 * 139.97596 * 5 3 2 7 7 H 1.09007 * 113.68399 * 89.12921 * 6 5 3 8 8 N 1.46498 * 113.61841 * 220.01633 * 6 5 3 9 9 C 1.34772 * 120.00016 * 252.50162 * 8 6 5 10 10 O 1.21272 * 120.00289 * 359.97438 * 9 8 6 11 11 C 1.50701 * 119.99683 * 180.02562 * 9 8 6 12 12 C 1.50694 * 109.47190 * 180.02562 * 11 9 8 13 13 C 1.34846 * 125.89535 * 85.02377 * 12 11 9 14 14 C 1.40890 * 107.42058 * 180.02562 * 13 12 11 15 15 C 1.34850 * 107.41766 * 359.97438 * 14 13 12 16 16 C 1.50695 * 125.89129 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.47198 * 244.97736 * 16 15 14 18 18 Si 1.86304 * 109.47428 * 4.97612 * 16 15 14 19 19 N 1.36349 * 108.21757 * 359.73872 * 15 14 13 20 20 C 1.53783 * 113.61104 * 209.99900 * 3 2 1 21 21 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 22 22 H 1.09000 * 109.47187 * 300.00233 * 1 2 3 23 23 H 1.09001 * 109.46558 * 60.00281 * 1 2 3 24 24 H 1.09003 * 113.61548 * 254.53075 * 5 3 2 25 25 H 1.09011 * 113.61419 * 25.43051 * 5 3 2 26 26 H 0.97003 * 119.99606 * 72.50268 * 8 6 5 27 27 H 1.09000 * 109.47002 * 299.99836 * 11 9 8 28 28 H 1.09000 * 109.47400 * 59.99477 * 11 9 8 29 29 H 1.08001 * 126.29385 * 0.02562 * 13 12 11 30 30 H 1.08004 * 126.29332 * 180.02562 * 14 13 12 31 31 H 1.09003 * 109.47477 * 124.97798 * 16 15 14 32 32 H 0.96701 * 113.99934 * 180.02562 * 17 16 15 33 33 H 1.48501 * 109.99960 * 178.68053 * 18 16 15 34 34 H 1.48504 * 109.99732 * 299.99944 * 18 16 15 35 35 H 0.96993 * 125.63376 * 180.26378 * 19 15 14 36 36 H 1.08998 * 113.61221 * 334.56248 * 20 3 2 37 37 H 1.09001 * 113.61718 * 105.47132 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6490 1.3017 6 6 3.8227 2.3182 0.4222 7 1 3.6235 3.3695 0.2143 8 7 5.1935 2.0787 0.8804 9 6 5.8950 3.0747 1.4568 10 8 5.3917 4.1693 1.5959 11 6 7.3052 2.8285 1.9276 12 6 7.8614 4.0926 2.5306 13 6 7.6937 4.5012 3.8046 14 6 8.3742 5.7265 3.9477 15 6 8.9325 6.0197 2.7557 16 6 9.7583 7.2410 2.4434 17 8 9.0729 8.0464 1.4823 18 14 10.0244 8.2260 4.0022 19 7 8.6264 5.0174 1.8835 20 6 3.3756 1.3719 -0.7045 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3632 0.5138 -0.8900 24 1 2.2140 2.3478 1.9411 25 1 3.1166 0.7741 1.8411 26 1 5.5962 1.2033 0.7688 27 1 7.3049 2.0380 2.6781 28 1 7.9231 2.5263 1.0820 29 1 7.1394 3.9843 4.5740 30 1 8.4379 6.3212 4.8470 31 1 10.7226 6.9339 2.0386 32 1 9.5477 8.8513 1.2334 33 1 10.8642 9.4163 3.7137 34 1 8.7170 8.6508 4.5640 35 1 8.9044 4.9714 0.9554 36 1 3.9088 0.4213 -0.7136 37 1 3.3385 1.8470 -1.6848 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:37 Heat of formation + Delta-G solvation = -40.508810 kcal Electronic energy + Delta-G solvation = -19860.322565 eV Core-core repulsion = 16606.029197 eV Total energy + Delta-G solvation = -3254.293368 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.32568 -41.14035 -39.74884 -37.86667 -37.27050 -34.31306 -32.96694 -31.94666 -29.55846 -27.78176 -26.78280 -25.63481 -24.39071 -21.90644 -21.35772 -21.27273 -20.79314 -18.64141 -18.42220 -18.16505 -17.85635 -16.85376 -16.44960 -16.18568 -16.01709 -15.81526 -15.26629 -15.08240 -14.81159 -14.59767 -14.31852 -14.00662 -13.76677 -13.49975 -13.43116 -13.30348 -12.92423 -12.77703 -12.46238 -12.19563 -12.14731 -11.95885 -11.87955 -10.98525 -10.61675 -10.50454 -10.07923 -9.80863 -8.96461 -4.88615 1.04135 1.29274 1.58217 1.61799 1.83027 1.99533 2.25557 2.48166 2.94229 3.39034 3.41639 3.51830 3.67249 3.78668 3.84577 3.91284 4.05102 4.22095 4.28684 4.29926 4.47638 4.49863 4.52334 4.62359 4.70456 4.70747 4.80402 4.83208 4.92255 4.94445 5.03838 5.23205 5.29773 5.49355 5.99529 6.11750 6.22475 6.50582 6.53738 6.68223 7.24288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.059 3.941 4 H 0.099 0.901 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.097 0.903 8 N -0.705 5.705 9 C 0.510 3.490 10 O -0.580 6.580 11 C -0.066 4.066 12 C 0.034 3.966 13 C -0.201 4.201 14 C -0.205 4.205 15 C 0.018 3.982 16 C -0.065 4.065 17 O -0.566 6.566 18 Si 0.793 3.207 19 N -0.537 5.537 20 C -0.132 4.132 21 H 0.094 0.906 22 H 0.046 0.954 23 H 0.051 0.949 24 H 0.065 0.935 25 H 0.095 0.905 26 H 0.419 0.581 27 H 0.147 0.853 28 H 0.133 0.867 29 H 0.143 0.857 30 H 0.147 0.853 31 H 0.097 0.903 32 H 0.396 0.604 33 H -0.277 1.277 34 H -0.308 1.308 35 H 0.419 0.581 36 H 0.106 0.894 37 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.501 -5.147 -1.605 6.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.001 3.999 4 H 0.117 0.883 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.115 0.885 8 N -0.358 5.358 9 C 0.298 3.702 10 O -0.459 6.459 11 C -0.106 4.106 12 C -0.080 4.080 13 C -0.225 4.225 14 C -0.230 4.230 15 C -0.095 4.095 16 C -0.173 4.173 17 O -0.377 6.377 18 Si 0.697 3.303 19 N -0.133 5.133 20 C -0.170 4.170 21 H 0.113 0.887 22 H 0.064 0.936 23 H 0.070 0.930 24 H 0.084 0.916 25 H 0.114 0.886 26 H 0.257 0.743 27 H 0.164 0.836 28 H 0.150 0.850 29 H 0.160 0.840 30 H 0.164 0.836 31 H 0.115 0.885 32 H 0.247 0.753 33 H -0.204 1.204 34 H -0.236 1.236 35 H 0.257 0.743 36 H 0.124 0.876 37 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.773 -4.269 -1.228 5.237 hybrid contribution -0.441 0.735 -1.394 1.637 sum 2.333 -3.534 -2.623 4.981 Atomic orbital electron populations 1.22959 0.79878 1.03758 1.00702 1.87899 1.21124 1.27665 1.94679 1.23560 0.94324 0.85539 0.96476 0.88323 1.23981 0.97564 1.01119 0.97852 1.22072 0.81138 0.99597 0.95543 0.88478 1.45796 1.14301 1.14744 1.60923 1.21143 0.88697 0.83808 0.76591 1.90762 1.72302 1.26211 1.56658 1.20263 0.91223 0.94765 1.04305 1.19916 1.00473 0.94602 0.92969 1.20842 1.06280 0.98634 0.96755 1.20876 1.04386 0.99962 0.97755 1.19883 1.06626 0.92010 0.90963 1.24728 0.95910 0.92699 1.03925 1.86581 1.50800 1.39244 1.61030 0.93538 0.79367 0.79126 0.78272 1.41865 1.41404 1.17517 1.12494 1.23557 0.94924 1.00330 0.98165 0.88746 0.93560 0.93027 0.91628 0.88603 0.74265 0.83567 0.84957 0.83967 0.83560 0.88484 0.75291 1.20406 1.23561 0.74308 0.87566 0.89376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.39 -1.07 10.71 -148.98 -1.60 -2.66 16 3 C 0.06 -0.02 4.31 31.12 0.13 0.11 16 4 H 0.10 -0.21 7.87 -2.39 -0.02 -0.23 16 5 C -0.17 -0.08 7.71 31.12 0.24 0.16 16 6 C 0.12 0.02 4.24 45.52 0.19 0.21 16 7 H 0.10 0.46 7.46 -2.38 -0.02 0.44 16 8 N -0.71 1.72 5.35 -440.04 -2.36 -0.64 16 9 C 0.51 1.65 7.82 87.66 0.69 2.33 16 10 O -0.58 -8.64 15.63 -3.01 -0.05 -8.69 16 11 C -0.07 0.23 6.24 29.10 0.18 0.41 16 12 C 0.03 0.15 5.66 41.08 0.23 0.39 16 13 C -0.20 -1.51 10.76 22.14 0.24 -1.27 16 14 C -0.20 -1.63 9.37 22.14 0.21 -1.42 16 15 C 0.02 0.12 6.53 41.08 0.27 0.39 16 16 C -0.06 -0.13 3.07 71.23 0.22 0.09 16 17 O -0.57 -2.98 12.86 -148.98 -1.92 -4.89 16 18 Si 0.79 0.33 30.60 68.60 2.10 2.43 16 19 N -0.54 -2.50 6.08 -171.12 -1.04 -3.54 16 20 C -0.13 0.39 7.66 31.12 0.24 0.63 16 21 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 22 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 23 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 24 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 25 H 0.10 0.03 8.14 -2.38 -0.02 0.01 16 26 H 0.42 -3.88 8.73 -92.71 -0.81 -4.69 16 27 H 0.15 -1.33 8.14 -2.39 -0.02 -1.35 16 28 H 0.13 -1.31 8.14 -2.39 -0.02 -1.33 16 29 H 0.14 0.71 8.06 -2.91 -0.02 0.69 16 30 H 0.15 0.75 6.24 -2.91 -0.02 0.73 16 31 H 0.10 -0.33 7.96 -2.39 -0.02 -0.35 16 32 H 0.40 -1.47 8.74 -74.06 -0.65 -2.12 16 33 H -0.28 -0.77 7.11 99.48 0.71 -0.06 16 34 H -0.31 -2.96 7.11 99.48 0.71 -2.25 16 35 H 0.42 0.15 8.96 -92.71 -0.83 -0.68 16 36 H 0.11 -0.48 8.12 -2.39 -0.02 -0.50 16 37 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 Total: 0.00 -25.42 316.96 -1.93 -27.36 By element: Atomic # 1 Polarization: -11.43 SS G_CDS: -1.15 Total: -12.58 kcal Atomic # 6 Polarization: -0.85 SS G_CDS: 4.07 Total: 3.22 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -3.40 Total: -4.18 kcal Atomic # 8 Polarization: -12.69 SS G_CDS: -3.56 Total: -16.25 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: 2.10 Total: 2.43 kcal Total: -25.42 -1.93 -27.36 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.152 kcal (2) G-P(sol) polarization free energy of solvation -25.424 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.356 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds