Wall clock time and date at job start Mon Mar 8 2021 04:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42898 * 113.99945 * 2 1 4 4 H 1.09002 * 112.85240 * 20.32953 * 3 2 1 5 5 C 1.53781 * 113.61632 * 151.52718 * 3 2 1 6 6 C 1.53777 * 87.08336 * 140.05947 * 5 3 2 7 7 H 1.09008 * 113.61204 * 89.11878 * 6 5 3 8 8 N 1.46492 * 113.61596 * 219.93501 * 6 5 3 9 9 C 1.34774 * 120.00245 * 205.00267 * 8 6 5 10 10 O 1.21287 * 119.99850 * 0.02562 * 9 8 6 11 11 C 1.50702 * 120.00455 * 179.97438 * 9 8 6 12 12 C 1.53543 * 109.82245 * 278.20810 * 11 9 8 13 13 C 1.53032 * 108.56277 * 179.50768 * 12 11 9 14 14 C 1.50211 * 110.31546 * 49.57381 * 13 12 11 15 15 C 1.50705 * 118.54437 * 159.97073 * 14 13 12 16 16 O 1.42899 * 109.47078 * 69.97688 * 15 14 13 17 17 Si 1.86303 * 109.46838 * 189.97836 * 15 14 13 18 18 C 1.31110 * 122.90470 * 339.94281 * 14 13 12 19 19 N 1.38928 * 121.85038 * 0.41196 * 18 14 13 20 20 C 1.53775 * 87.07992 * 334.56762 * 6 5 3 21 21 H 1.08997 * 109.47415 * 300.00867 * 1 2 3 22 22 H 1.09004 * 109.47039 * 60.00584 * 1 2 3 23 23 H 1.08998 * 109.47251 * 179.97438 * 1 2 3 24 24 H 1.08997 * 113.61673 * 254.61496 * 5 3 2 25 25 H 1.09005 * 113.61396 * 25.51324 * 5 3 2 26 26 H 0.97005 * 120.00166 * 24.99923 * 8 6 5 27 27 H 1.08999 * 109.81006 * 39.13683 * 11 9 8 28 28 H 1.09000 * 109.62151 * 299.23466 * 12 11 9 29 29 H 1.08997 * 109.62251 * 59.78540 * 12 11 9 30 30 H 1.08997 * 109.32991 * 289.31386 * 13 12 11 31 31 H 1.09003 * 109.19107 * 169.74279 * 13 12 11 32 32 H 1.08999 * 109.47307 * 309.97459 * 15 14 13 33 33 H 0.96700 * 113.99796 * 60.00345 * 16 15 14 34 34 H 1.48500 * 109.99820 * 180.02562 * 17 15 14 35 35 H 1.48497 * 109.99811 * 301.31812 * 17 15 14 36 36 H 1.08007 * 119.07230 * 180.42241 * 18 14 13 37 37 H 0.96996 * 120.55723 * 166.69945 * 19 18 14 38 38 H 1.08993 * 113.61636 * 270.87622 * 20 6 5 39 39 H 1.09008 * 113.61006 * 139.97865 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3219 2.0753 0.3490 5 6 3.3923 1.3645 0.6717 6 6 3.8114 2.3246 -0.4540 7 1 3.6155 3.3731 -0.2292 8 7 5.1713 2.0929 -0.9469 9 6 5.8576 3.0968 -1.5280 10 8 5.3495 4.1921 -1.6424 11 6 7.2569 2.8587 -2.0346 12 6 8.2554 2.9585 -0.8724 13 6 9.6625 2.7003 -1.4157 14 6 9.9158 3.5464 -2.6307 15 6 11.3418 3.7996 -3.0474 16 8 11.9129 2.5903 -3.5509 17 14 11.3779 5.1041 -4.3770 18 6 8.9512 4.0739 -3.3451 19 7 7.6132 3.8913 -3.0187 20 6 2.7213 1.6651 -1.3152 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0276 -0.0005 24 1 3.3789 1.8277 1.6583 25 1 3.9262 0.4142 0.6565 26 1 5.5779 1.2170 -0.8551 27 1 7.3205 1.8724 -2.4942 28 1 8.2091 3.9557 -0.4347 29 1 8.0124 2.2123 -0.1160 30 1 9.7589 1.6479 -1.6824 31 1 10.3944 2.9460 -0.6461 32 1 11.9165 4.1421 -2.1868 33 1 11.4512 2.2275 -4.3192 34 1 12.7786 5.3625 -4.7971 35 1 10.5716 4.6629 -5.5434 36 1 9.2039 4.6669 -4.2117 37 1 6.9258 4.4356 -3.4333 38 1 3.0717 0.7972 -1.8737 39 1 2.1661 2.3713 -1.9328 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_15413834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:41 Heat of formation + Delta-G solvation = -60.635564 kcal Electronic energy + Delta-G solvation = -20755.221218 eV Core-core repulsion = 17472.743610 eV Total energy + Delta-G solvation = -3282.477608 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.146 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.61445 -40.46718 -39.30082 -37.54934 -37.17970 -34.43798 -33.24436 -32.79351 -28.16619 -27.50465 -26.87597 -25.59038 -24.82297 -23.54410 -21.76778 -21.18590 -19.40897 -19.08191 -18.29699 -18.01380 -17.05174 -16.91206 -16.60149 -16.24143 -16.03930 -15.94409 -15.54714 -15.24629 -15.18360 -14.82781 -14.41174 -14.20039 -13.92448 -13.62112 -13.48964 -13.02855 -12.91812 -12.86758 -12.31969 -12.29029 -12.24925 -11.97609 -11.95087 -11.60416 -11.27472 -10.84128 -10.57198 -10.26204 -10.17563 -8.49039 -4.87884 1.31243 1.41908 1.44907 1.61927 1.79312 2.04823 2.56177 2.81817 3.29071 3.40974 3.49268 3.56336 3.67779 3.73075 3.75373 3.83048 3.95714 4.18210 4.24639 4.35730 4.37309 4.38686 4.57713 4.58225 4.59491 4.69461 4.69968 4.73727 4.80138 4.84805 4.92919 4.97840 5.18480 5.26256 5.35381 5.53689 6.13361 6.18866 6.35634 6.60208 6.80195 7.03067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.143 4.143 6 C 0.124 3.876 7 H 0.120 0.880 8 N -0.713 5.713 9 C 0.514 3.486 10 O -0.530 6.530 11 C 0.136 3.864 12 C -0.127 4.127 13 C -0.051 4.051 14 C -0.277 4.277 15 C -0.050 4.050 16 O -0.537 6.537 17 Si 0.670 3.330 18 C 0.139 3.861 19 N -0.731 5.731 20 C -0.169 4.169 21 H 0.044 0.956 22 H 0.043 0.957 23 H 0.087 0.913 24 H 0.083 0.917 25 H 0.098 0.902 26 H 0.405 0.595 27 H 0.089 0.911 28 H 0.078 0.922 29 H 0.078 0.922 30 H 0.066 0.934 31 H 0.075 0.925 32 H 0.110 0.890 33 H 0.371 0.629 34 H -0.261 1.261 35 H -0.265 1.265 36 H 0.134 0.866 37 H 0.409 0.591 38 H 0.095 0.905 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.075 -1.024 1.683 3.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.181 4.181 6 C 0.019 3.981 7 H 0.138 0.862 8 N -0.364 5.364 9 C 0.300 3.700 10 O -0.405 6.405 11 C 0.026 3.974 12 C -0.165 4.165 13 C -0.088 4.088 14 C -0.287 4.287 15 C -0.161 4.161 16 O -0.343 6.343 17 Si 0.573 3.427 18 C 0.018 3.982 19 N -0.364 5.364 20 C -0.208 4.208 21 H 0.062 0.938 22 H 0.062 0.938 23 H 0.106 0.894 24 H 0.102 0.898 25 H 0.116 0.884 26 H 0.240 0.760 27 H 0.107 0.893 28 H 0.097 0.903 29 H 0.097 0.903 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.127 0.873 33 H 0.218 0.782 34 H -0.186 1.186 35 H -0.190 1.190 36 H 0.151 0.849 37 H 0.246 0.754 38 H 0.113 0.887 39 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -2.718 -0.192 1.349 3.040 hybrid contribution -0.432 -1.181 -0.589 1.389 sum -3.150 -1.373 0.759 3.519 Atomic orbital electron populations 1.22833 0.80675 1.03111 1.00173 1.87939 1.20071 1.26793 1.94561 1.23444 0.93794 0.85850 0.96398 0.88928 1.23616 0.95625 1.00308 0.98572 1.22233 0.80559 1.00583 0.94760 0.86237 1.45857 1.15800 1.13933 1.60858 1.20656 0.87248 0.84504 0.77637 1.90736 1.70130 1.23918 1.55747 1.21003 0.91372 0.93364 0.91616 1.21880 0.95039 1.03677 0.95941 1.19938 0.95043 0.98786 0.95077 1.20904 0.94305 1.11840 1.01649 1.24722 0.92745 0.93189 1.05479 1.86577 1.57672 1.40052 1.49988 0.95284 0.81423 0.86581 0.79393 1.20505 0.83555 0.97537 0.96617 1.44275 1.05582 1.40465 1.46104 1.24026 0.97475 1.01430 0.97877 0.93759 0.93847 0.89421 0.89845 0.88383 0.76019 0.89296 0.90304 0.90299 0.91536 0.90648 0.87253 0.78152 1.18596 1.19031 0.84881 0.75414 0.88689 0.90560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.32 10.72 -35.23 -0.38 -0.70 16 3 C 0.06 -0.07 4.30 -25.92 -0.11 -0.18 16 4 H 0.09 -0.20 7.88 -51.93 -0.41 -0.61 16 5 C -0.14 0.29 7.66 -25.92 -0.20 0.10 16 6 C 0.12 -0.16 4.24 -67.13 -0.28 -0.44 16 7 H 0.12 0.00 7.46 -51.92 -0.39 -0.39 16 8 N -0.71 1.28 5.36 -53.02 -0.28 1.00 16 9 C 0.51 0.22 7.08 -10.99 -0.08 0.14 16 10 O -0.53 -2.20 15.70 5.55 0.09 -2.12 16 11 C 0.14 -0.12 3.36 -68.51 -0.23 -0.35 16 12 C -0.13 0.16 5.47 -26.43 -0.14 0.01 16 13 C -0.05 0.03 5.85 -28.10 -0.16 -0.14 16 14 C -0.28 0.00 5.37 -101.33 -0.54 -0.55 16 15 C -0.05 -0.01 2.81 36.01 0.10 0.09 16 16 O -0.54 -0.99 12.88 -35.23 -0.45 -1.44 16 17 Si 0.67 -0.22 29.97 -169.99 -5.09 -5.31 16 18 C 0.14 -0.03 9.61 -16.08 -0.15 -0.19 16 19 N -0.73 -0.02 5.46 -55.34 -0.30 -0.32 16 20 C -0.17 0.17 7.71 -25.92 -0.20 -0.03 16 21 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 24 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 25 H 0.10 -0.22 8.12 -51.93 -0.42 -0.64 16 26 H 0.40 -1.68 8.73 -40.82 -0.36 -2.03 16 27 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 33 H 0.37 -0.36 8.70 45.56 0.40 0.03 16 34 H -0.26 -0.86 7.11 56.52 0.40 -0.45 16 35 H -0.26 -0.35 6.82 56.52 0.39 0.03 16 36 H 0.13 -0.17 4.31 -52.48 -0.23 -0.40 16 37 H 0.41 0.09 8.12 -40.82 -0.33 -0.25 16 38 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 -0.05 8.14 -51.92 -0.42 -0.47 16 LS Contribution 319.18 15.07 4.81 4.81 Total: 0.00 -6.90 319.18 -8.54 -15.44 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -6.01 Total: -10.89 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: -0.91 Total: -0.48 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.59 Total: 0.68 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.74 Total: -4.25 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: -5.09 Total: -5.31 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -6.90 -8.54 -15.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_15413834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.197 kcal (2) G-P(sol) polarization free energy of solvation -6.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds