Wall clock time and date at job start Mon Mar 8 2021 04:10:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42898 * 113.99945 * 2 1 4 4 H 1.09002 * 112.85240 * 20.32953 * 3 2 1 5 5 C 1.53781 * 113.61632 * 151.52718 * 3 2 1 6 6 C 1.53777 * 87.08336 * 140.05947 * 5 3 2 7 7 H 1.09008 * 113.61204 * 89.11878 * 6 5 3 8 8 N 1.46492 * 113.61596 * 219.93501 * 6 5 3 9 9 C 1.34774 * 120.00245 * 205.00267 * 8 6 5 10 10 O 1.21287 * 119.99850 * 0.02562 * 9 8 6 11 11 C 1.50702 * 120.00455 * 179.97438 * 9 8 6 12 12 C 1.53543 * 109.82245 * 278.20810 * 11 9 8 13 13 C 1.53032 * 108.56277 * 179.50768 * 12 11 9 14 14 C 1.50211 * 110.31546 * 49.57381 * 13 12 11 15 15 C 1.50705 * 118.54437 * 159.97073 * 14 13 12 16 16 O 1.42899 * 109.47078 * 69.97688 * 15 14 13 17 17 Si 1.86303 * 109.46838 * 189.97836 * 15 14 13 18 18 C 1.31110 * 122.90470 * 339.94281 * 14 13 12 19 19 N 1.38928 * 121.85038 * 0.41196 * 18 14 13 20 20 C 1.53775 * 87.07992 * 334.56762 * 6 5 3 21 21 H 1.08997 * 109.47415 * 300.00867 * 1 2 3 22 22 H 1.09004 * 109.47039 * 60.00584 * 1 2 3 23 23 H 1.08998 * 109.47251 * 179.97438 * 1 2 3 24 24 H 1.08997 * 113.61673 * 254.61496 * 5 3 2 25 25 H 1.09005 * 113.61396 * 25.51324 * 5 3 2 26 26 H 0.97005 * 120.00166 * 24.99923 * 8 6 5 27 27 H 1.08999 * 109.81006 * 39.13683 * 11 9 8 28 28 H 1.09000 * 109.62151 * 299.23466 * 12 11 9 29 29 H 1.08997 * 109.62251 * 59.78540 * 12 11 9 30 30 H 1.08997 * 109.32991 * 289.31386 * 13 12 11 31 31 H 1.09003 * 109.19107 * 169.74279 * 13 12 11 32 32 H 1.08999 * 109.47307 * 309.97459 * 15 14 13 33 33 H 0.96700 * 113.99796 * 60.00345 * 16 15 14 34 34 H 1.48500 * 109.99820 * 180.02562 * 17 15 14 35 35 H 1.48497 * 109.99811 * 301.31812 * 17 15 14 36 36 H 1.08007 * 119.07230 * 180.42241 * 18 14 13 37 37 H 0.96996 * 120.55723 * 166.69945 * 19 18 14 38 38 H 1.08993 * 113.61636 * 270.87622 * 20 6 5 39 39 H 1.09008 * 113.61006 * 139.97865 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3219 2.0753 0.3490 5 6 3.3923 1.3645 0.6717 6 6 3.8114 2.3246 -0.4540 7 1 3.6155 3.3731 -0.2292 8 7 5.1713 2.0929 -0.9469 9 6 5.8576 3.0968 -1.5280 10 8 5.3495 4.1921 -1.6424 11 6 7.2569 2.8587 -2.0346 12 6 8.2554 2.9585 -0.8724 13 6 9.6625 2.7003 -1.4157 14 6 9.9158 3.5464 -2.6307 15 6 11.3418 3.7996 -3.0474 16 8 11.9129 2.5903 -3.5509 17 14 11.3779 5.1041 -4.3770 18 6 8.9512 4.0739 -3.3451 19 7 7.6132 3.8913 -3.0187 20 6 2.7213 1.6651 -1.3152 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0276 -0.0005 24 1 3.3789 1.8277 1.6583 25 1 3.9262 0.4142 0.6565 26 1 5.5779 1.2170 -0.8551 27 1 7.3205 1.8724 -2.4942 28 1 8.2091 3.9557 -0.4347 29 1 8.0124 2.2123 -0.1160 30 1 9.7589 1.6479 -1.6824 31 1 10.3944 2.9460 -0.6461 32 1 11.9165 4.1421 -2.1868 33 1 11.4512 2.2275 -4.3192 34 1 12.7786 5.3625 -4.7971 35 1 10.5716 4.6629 -5.5434 36 1 9.2039 4.6669 -4.2117 37 1 6.9258 4.4356 -3.4333 38 1 3.0717 0.7972 -1.8737 39 1 2.1661 2.3713 -1.9328 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_15413834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:40 Heat of formation + Delta-G solvation = -61.997563 kcal Electronic energy + Delta-G solvation = -20755.280279 eV Core-core repulsion = 17472.743610 eV Total energy + Delta-G solvation = -3282.536669 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.146 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.59871 -40.40449 -39.31773 -37.56377 -37.18783 -34.42923 -33.21880 -32.74899 -28.09797 -27.45017 -26.76324 -25.57221 -24.75262 -23.49521 -21.75485 -21.09697 -19.39884 -19.03630 -18.25000 -18.01733 -17.04676 -16.86051 -16.58357 -16.20954 -16.01744 -15.93309 -15.53317 -15.24045 -15.16326 -14.77246 -14.40320 -14.14775 -13.98012 -13.50800 -13.42736 -13.00895 -12.92400 -12.76550 -12.38738 -12.21798 -12.15520 -11.95049 -11.86277 -11.64857 -11.25323 -10.88662 -10.49663 -10.29543 -10.14104 -8.46617 -4.88886 1.31969 1.40486 1.44624 1.56879 1.85698 1.98865 2.61540 2.91980 3.40150 3.51085 3.56320 3.60232 3.76976 3.80720 3.86313 3.89694 4.04361 4.28441 4.32224 4.46843 4.50111 4.53296 4.62764 4.70157 4.71204 4.73450 4.77835 4.84291 4.93265 4.93769 5.00958 5.04829 5.24868 5.30315 5.43301 5.57767 6.22524 6.25101 6.44101 6.65020 6.81724 7.07656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.059 3.941 4 H 0.102 0.898 5 C -0.133 4.133 6 C 0.124 3.876 7 H 0.106 0.894 8 N -0.700 5.700 9 C 0.515 3.485 10 O -0.571 6.571 11 C 0.138 3.862 12 C -0.120 4.120 13 C -0.052 4.052 14 C -0.282 4.282 15 C -0.056 4.056 16 O -0.556 6.556 17 Si 0.744 3.256 18 C 0.137 3.863 19 N -0.737 5.737 20 C -0.167 4.167 21 H 0.052 0.948 22 H 0.046 0.954 23 H 0.092 0.908 24 H 0.091 0.909 25 H 0.103 0.897 26 H 0.418 0.582 27 H 0.107 0.893 28 H 0.063 0.937 29 H 0.098 0.902 30 H 0.068 0.932 31 H 0.074 0.926 32 H 0.111 0.889 33 H 0.382 0.618 34 H -0.311 1.311 35 H -0.283 1.283 36 H 0.142 0.858 37 H 0.407 0.593 38 H 0.092 0.908 39 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.376 -1.714 2.212 4.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.001 3.999 4 H 0.120 0.880 5 C -0.171 4.171 6 C 0.019 3.981 7 H 0.124 0.876 8 N -0.352 5.352 9 C 0.301 3.699 10 O -0.450 6.450 11 C 0.029 3.971 12 C -0.159 4.159 13 C -0.089 4.089 14 C -0.292 4.292 15 C -0.166 4.166 16 O -0.364 6.364 17 Si 0.652 3.348 18 C 0.016 3.984 19 N -0.369 5.369 20 C -0.206 4.206 21 H 0.071 0.929 22 H 0.065 0.935 23 H 0.111 0.889 24 H 0.109 0.891 25 H 0.122 0.878 26 H 0.256 0.744 27 H 0.125 0.875 28 H 0.082 0.918 29 H 0.117 0.883 30 H 0.087 0.913 31 H 0.092 0.908 32 H 0.129 0.871 33 H 0.231 0.769 34 H -0.240 1.240 35 H -0.211 1.211 36 H 0.159 0.841 37 H 0.244 0.756 38 H 0.110 0.890 39 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.039 -0.925 1.902 3.703 hybrid contribution -0.338 -0.989 -0.778 1.303 sum -3.377 -1.915 1.125 4.041 Atomic orbital electron populations 1.22950 0.79870 1.03689 1.00762 1.87902 1.21131 1.27795 1.94684 1.23573 0.94390 0.85550 0.96415 0.88035 1.23560 0.94843 1.00199 0.98489 1.22151 0.80666 1.00095 0.95234 0.87558 1.45775 1.15475 1.14172 1.59735 1.20887 0.87650 0.84119 0.77194 1.90719 1.71110 1.25615 1.57571 1.21099 0.90508 0.93854 0.91682 1.21841 0.94514 1.03438 0.96119 1.19949 0.95357 0.98760 0.94820 1.20923 0.94013 1.12289 1.02019 1.24850 0.93024 0.92904 1.05829 1.86544 1.58431 1.40697 1.50735 0.94429 0.77507 0.85188 0.77652 1.20608 0.83477 0.97480 0.96791 1.44377 1.05602 1.40689 1.46257 1.23989 0.97574 1.01108 0.97952 0.92928 0.93511 0.88929 0.89054 0.87840 0.74422 0.87549 0.91827 0.88318 0.91317 0.90788 0.87069 0.76946 1.24017 1.21075 0.84147 0.75645 0.88970 0.91204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.58 10.72 -148.98 -1.60 -2.18 16 3 C 0.06 -0.14 4.30 31.12 0.13 0.00 16 4 H 0.10 -0.46 7.88 -2.39 -0.02 -0.48 16 5 C -0.13 0.64 7.66 31.12 0.24 0.88 16 6 C 0.12 -0.32 4.24 45.52 0.19 -0.12 16 7 H 0.11 0.07 7.46 -2.38 -0.02 0.05 16 8 N -0.70 2.86 5.36 -440.05 -2.36 0.50 16 9 C 0.52 0.43 7.08 87.66 0.62 1.05 16 10 O -0.57 -5.21 15.70 -3.05 -0.05 -5.26 16 11 C 0.14 -0.32 3.36 44.33 0.15 -0.18 16 12 C -0.12 0.38 5.47 30.79 0.17 0.55 16 13 C -0.05 0.08 5.85 29.71 0.17 0.26 16 14 C -0.28 0.08 5.37 -16.75 -0.09 -0.01 16 15 C -0.06 -0.03 2.81 71.24 0.20 0.17 16 16 O -0.56 -2.06 12.88 -148.98 -1.92 -3.98 16 17 Si 0.74 -0.16 29.97 68.60 2.06 1.90 16 18 C 0.14 -0.09 9.61 83.42 0.80 0.71 16 19 N -0.74 0.01 5.46 -329.00 -1.80 -1.79 16 20 C -0.17 0.30 7.71 31.12 0.24 0.54 16 21 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 22 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 23 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 24 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 25 H 0.10 -0.59 8.12 -2.38 -0.02 -0.61 16 26 H 0.42 -3.97 8.73 -92.70 -0.81 -4.78 16 27 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 28 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 29 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 30 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 32 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 33 H 0.38 -0.75 8.70 -74.06 -0.64 -1.40 16 34 H -0.31 -2.59 7.11 99.48 0.71 -1.89 16 35 H -0.28 -0.79 6.82 99.48 0.68 -0.11 16 36 H 0.14 -0.39 4.31 -2.91 -0.01 -0.41 16 37 H 0.41 0.34 8.12 -92.71 -0.75 -0.41 16 38 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.07 -0.04 8.14 -2.38 -0.02 -0.06 16 Total: 0.00 -16.35 319.18 -2.72 -19.08 By element: Atomic # 1 Polarization: -12.15 SS G_CDS: -1.12 Total: -13.27 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: 4.06 Total: 5.01 kcal Atomic # 7 Polarization: 2.86 SS G_CDS: -4.15 Total: -1.29 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -3.56 Total: -11.42 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: 2.06 Total: 1.90 kcal Total: -16.35 -2.72 -19.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_15413834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.921 kcal (2) G-P(sol) polarization free energy of solvation -16.352 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds