Wall clock time and date at job start Mon Mar 8 2021 04:10:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.42901 * 113.99862 * 2 1 4 4 H 1.08994 * 112.90936 * 18.75022 * 3 2 1 5 5 C 1.53781 * 113.60933 * 150.00012 * 3 2 1 6 6 C 1.53787 * 87.07905 * 139.98035 * 5 3 2 7 7 H 1.09007 * 113.61020 * 89.19531 * 6 5 3 8 8 N 1.46497 * 113.61559 * 220.01789 * 6 5 3 9 9 C 1.34776 * 119.99704 * 204.99904 * 8 6 5 10 10 O 1.21624 * 120.00467 * 0.02562 * 9 8 6 11 11 C 1.47259 * 119.99933 * 180.02562 * 9 8 6 12 12 C 1.36339 * 126.97601 * 180.02562 * 11 9 8 13 13 C 1.51000 * 126.78396 * 359.97438 * 12 11 9 14 14 C 1.53397 * 108.24610 * 164.30532 * 13 12 11 15 15 C 1.53160 * 109.04377 * 48.47976 * 14 13 12 16 16 C 1.53136 * 109.52440 * 290.42547 * 15 14 13 17 17 N 1.35203 * 108.66577 * 179.97438 * 12 11 9 18 18 C 1.36427 * 109.90187 * 359.97438 * 17 12 11 19 19 C 1.50699 * 125.49433 * 180.02562 * 18 17 12 20 20 O 1.42897 * 109.47140 * 29.94670 * 19 18 17 21 21 Si 1.86298 * 109.47051 * 149.95193 * 19 18 17 22 22 C 1.34491 * 109.00802 * 0.02562 * 18 17 12 23 23 C 1.53782 * 87.08291 * 334.56857 * 6 5 3 24 24 H 1.08997 * 109.46910 * 299.99599 * 1 2 3 25 25 H 1.09001 * 109.47026 * 59.99434 * 1 2 3 26 26 H 1.09000 * 109.46767 * 179.97438 * 1 2 3 27 27 H 1.08993 * 113.61705 * 25.43776 * 5 3 2 28 28 H 1.08997 * 113.61494 * 254.52510 * 5 3 2 29 29 H 0.96996 * 120.00263 * 25.00097 * 8 6 5 30 30 H 1.08999 * 109.70573 * 44.62241 * 13 12 11 31 31 H 1.09000 * 109.71205 * 283.99610 * 13 12 11 32 32 H 1.09006 * 109.53968 * 168.34750 * 14 13 12 33 33 H 1.08997 * 109.54371 * 288.60360 * 14 13 12 34 34 H 1.09000 * 109.45811 * 50.44279 * 15 14 13 35 35 H 1.09003 * 109.46169 * 170.40800 * 15 14 13 36 36 H 1.08997 * 109.56713 * 291.16188 * 16 15 14 37 37 H 1.08994 * 109.55616 * 170.82531 * 16 15 14 38 38 H 1.09008 * 109.46714 * 269.94794 * 19 18 17 39 39 H 0.96702 * 113.99667 * 60.00556 * 20 19 18 40 40 H 1.48504 * 110.00082 * 179.97438 * 21 19 18 41 41 H 1.48499 * 109.99818 * 301.31599 * 21 19 18 42 42 H 1.08001 * 126.81448 * 180.02562 * 22 18 17 43 43 H 1.08998 * 113.61666 * 139.97454 * 23 6 5 44 44 H 1.09000 * 113.61507 * 270.88653 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3143 2.0797 0.3227 5 6 3.3756 1.3718 0.7045 6 6 3.8228 2.3181 -0.4222 7 1 3.6236 3.3694 -0.2142 8 7 5.1935 2.0786 -0.8804 9 6 5.8951 3.0745 -1.4568 10 8 5.3904 4.1723 -1.5963 11 6 7.2727 2.8337 -1.9179 12 6 8.1064 3.7319 -2.5152 13 6 7.7997 5.1751 -2.8369 14 6 9.1230 5.8936 -3.1296 15 6 9.9380 5.0561 -4.1198 16 6 10.4257 3.7790 -3.4298 17 7 9.2815 3.1195 -2.7837 18 6 9.2340 1.8209 -2.3683 19 6 10.3533 0.8199 -2.4958 20 8 11.6089 1.4998 -2.4400 21 14 10.2496 -0.4087 -1.0992 22 6 8.0272 1.5782 -1.8266 23 6 2.7535 1.6489 -1.3018 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 3.9089 0.4213 0.7137 28 1 3.3385 1.8470 1.6848 29 1 5.5962 1.2032 -0.7689 30 1 7.3071 5.6447 -1.9855 31 1 7.1518 5.2270 -3.7118 32 1 8.9182 6.8728 -3.5625 33 1 9.6856 6.0133 -2.2038 34 1 9.3128 4.7921 -4.9727 35 1 10.7961 5.6336 -4.4636 36 1 11.1728 4.0329 -2.6778 37 1 10.8634 3.1089 -4.1697 38 1 10.2656 0.2962 -3.4477 39 1 11.7554 1.9885 -1.6185 40 1 11.3478 -1.4018 -1.2138 41 1 10.3359 0.2963 0.2049 42 1 7.6820 0.6447 -1.4071 43 1 2.2140 2.3478 -1.9411 44 1 3.1166 0.7740 -1.8410 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_16915396.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:46 Heat of formation + Delta-G solvation = -43.455230 kcal Electronic energy + Delta-G solvation = -25839.035941 eV Core-core repulsion = 22145.313429 eV Total energy + Delta-G solvation = -3693.722513 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.79347 -40.97496 -39.52486 -38.07761 -37.16832 -36.88448 -34.07746 -33.42688 -31.17064 -29.53286 -27.75207 -26.74176 -26.63792 -25.25604 -24.64698 -23.30327 -21.73735 -21.22614 -20.87014 -19.61831 -18.85918 -18.11214 -17.29992 -17.04282 -16.78651 -16.62455 -16.17599 -16.02799 -15.69085 -15.59260 -15.32056 -15.31587 -15.13080 -14.83821 -14.69847 -14.47211 -14.24743 -13.89689 -13.42755 -13.36955 -13.20325 -12.75702 -12.68887 -12.41358 -12.19354 -12.09609 -12.06666 -12.01223 -11.85844 -11.79616 -11.76763 -10.90024 -10.86654 -10.43048 -10.03090 -9.56165 -9.04818 -4.89917 0.71277 1.05970 1.44123 1.67777 1.78044 2.03089 2.36999 2.53124 3.02184 3.21721 3.46792 3.50528 3.56788 3.61298 3.67356 3.77359 3.80452 3.88120 3.92768 4.16596 4.29127 4.33470 4.38521 4.38847 4.52183 4.56520 4.58176 4.62398 4.73725 4.76966 4.77753 4.79213 4.81300 4.89132 4.93626 4.99252 5.00532 5.03344 5.09361 5.18525 5.20875 5.61105 5.73433 6.02379 6.21078 6.29969 6.35475 6.69912 7.36854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.062 3.938 4 H 0.101 0.899 5 C -0.133 4.133 6 C 0.124 3.876 7 H 0.103 0.897 8 N -0.703 5.703 9 C 0.590 3.410 10 O -0.590 6.590 11 C -0.258 4.258 12 C 0.103 3.897 13 C -0.054 4.054 14 C -0.124 4.124 15 C -0.135 4.135 16 C 0.105 3.895 17 N -0.429 5.429 18 C -0.018 4.018 19 C -0.054 4.054 20 O -0.544 6.544 21 Si 0.799 3.201 22 C -0.161 4.161 23 C -0.166 4.166 24 H 0.051 0.949 25 H 0.046 0.954 26 H 0.093 0.907 27 H 0.104 0.896 28 H 0.089 0.911 29 H 0.414 0.586 30 H 0.081 0.919 31 H 0.079 0.921 32 H 0.089 0.911 33 H 0.068 0.932 34 H 0.068 0.932 35 H 0.108 0.892 36 H 0.093 0.907 37 H 0.098 0.902 38 H 0.130 0.870 39 H 0.385 0.615 40 H -0.296 1.296 41 H -0.291 1.291 42 H 0.183 0.817 43 H 0.067 0.933 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.586 -2.124 0.239 2.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.003 3.997 4 H 0.119 0.881 5 C -0.171 4.171 6 C 0.019 3.981 7 H 0.121 0.879 8 N -0.353 5.353 9 C 0.381 3.619 10 O -0.472 6.472 11 C -0.267 4.267 12 C -0.015 4.015 13 C -0.092 4.092 14 C -0.161 4.161 15 C -0.172 4.172 16 C -0.015 4.015 17 N -0.105 5.105 18 C -0.126 4.126 19 C -0.163 4.163 20 O -0.352 6.352 21 Si 0.702 3.298 22 C -0.184 4.184 23 C -0.205 4.205 24 H 0.070 0.930 25 H 0.064 0.936 26 H 0.111 0.889 27 H 0.123 0.877 28 H 0.108 0.892 29 H 0.252 0.748 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.108 0.892 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.126 0.874 36 H 0.111 0.889 37 H 0.116 0.884 38 H 0.148 0.852 39 H 0.234 0.766 40 H -0.223 1.223 41 H -0.218 1.218 42 H 0.200 0.800 43 H 0.086 0.914 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.127 -2.013 0.081 2.308 hybrid contribution 0.515 0.915 0.116 1.057 sum 1.642 -1.097 0.197 1.985 Atomic orbital electron populations 1.22953 0.79942 1.03684 1.00700 1.87905 1.21064 1.27721 1.94668 1.23546 0.94236 0.85531 0.96339 0.88071 1.23569 0.94957 1.00355 0.98232 1.22117 0.80589 0.99912 0.95510 0.87903 1.45561 1.14332 1.14405 1.61022 1.17592 0.84641 0.83567 0.76133 1.90728 1.72032 1.25577 1.58887 1.19995 0.95194 0.96190 1.15363 1.20563 0.85819 0.95658 0.99494 1.20438 0.98340 0.87754 1.02622 1.21699 0.94810 0.99664 0.99943 1.21933 1.01890 0.95037 0.98367 1.22261 0.86216 0.94968 0.98073 1.44042 1.12001 1.09118 1.45378 1.20989 0.98931 0.85915 1.06786 1.25024 0.79948 0.97683 1.13637 1.86565 1.35959 1.68915 1.43750 0.93485 0.86880 0.76884 0.72572 1.22012 0.92630 0.97908 1.05892 1.23984 0.97546 1.01091 0.97902 0.92993 0.93569 0.88855 0.87720 0.89242 0.74826 0.90050 0.90241 0.89249 0.91311 0.91330 0.87407 0.88873 0.88360 0.85194 0.76624 1.22308 1.21793 0.79996 0.91427 0.88934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.39 -1.17 10.71 -148.98 -1.60 -2.77 16 3 C 0.06 0.00 4.31 31.12 0.13 0.13 16 4 H 0.10 -0.24 7.87 -2.39 -0.02 -0.26 16 5 C -0.13 0.25 7.66 31.12 0.24 0.49 16 6 C 0.12 0.21 4.24 45.52 0.19 0.41 16 7 H 0.10 0.52 7.46 -2.38 -0.02 0.50 16 8 N -0.70 -1.52 5.35 -443.44 -2.37 -3.89 16 9 C 0.59 5.16 7.81 86.62 0.68 5.84 16 10 O -0.59 -9.28 14.93 -4.11 -0.06 -9.34 16 11 C -0.26 -1.62 6.28 -19.12 -0.12 -1.74 16 12 C 0.10 0.61 6.57 41.69 0.27 0.88 16 13 C -0.05 -0.25 5.32 30.08 0.16 -0.09 16 14 C -0.12 0.15 5.98 30.78 0.18 0.34 16 15 C -0.13 0.47 5.92 30.69 0.18 0.66 16 16 C 0.10 -0.25 5.32 86.33 0.46 0.21 16 17 N -0.43 -0.88 3.11 -493.61 -1.54 -2.42 16 18 C -0.02 -0.01 6.15 40.99 0.25 0.25 16 19 C -0.05 0.16 2.99 71.24 0.21 0.38 16 20 O -0.54 0.85 10.68 -148.98 -1.59 -0.74 16 21 Si 0.80 -3.38 31.11 68.60 2.13 -1.25 16 22 C -0.16 -0.02 9.09 23.64 0.21 0.19 16 23 C -0.17 -0.23 7.71 31.12 0.24 0.01 16 24 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 25 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 26 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 27 H 0.10 -0.33 8.12 -2.39 -0.02 -0.35 16 28 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 29 H 0.41 -1.43 7.85 -92.71 -0.73 -2.16 16 30 H 0.08 0.66 7.40 -2.39 -0.02 0.64 16 31 H 0.08 0.46 8.14 -2.39 -0.02 0.44 16 32 H 0.09 -0.28 8.14 -2.38 -0.02 -0.30 16 33 H 0.07 -0.08 8.12 -2.39 -0.02 -0.10 16 34 H 0.07 -0.12 8.11 -2.39 -0.02 -0.14 16 35 H 0.11 -0.78 8.14 -2.39 -0.02 -0.80 16 36 H 0.09 -0.42 7.94 -2.39 -0.02 -0.44 16 37 H 0.10 -0.24 7.69 -2.39 -0.02 -0.26 16 38 H 0.13 -0.61 7.96 -2.38 -0.02 -0.63 16 39 H 0.38 -2.21 8.63 -74.06 -0.64 -2.84 16 40 H -0.30 -0.81 7.11 99.48 0.71 -0.10 16 41 H -0.29 -0.48 7.11 99.48 0.71 0.23 16 42 H 0.18 -1.35 6.52 -2.91 -0.02 -1.37 16 43 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 44 H 0.09 0.18 8.14 -2.39 -0.02 0.16 16 Total: 0.00 -19.07 353.28 -0.81 -19.88 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -0.32 Total: -8.60 kcal Atomic # 6 Polarization: 4.61 SS G_CDS: 4.53 Total: 9.14 kcal Atomic # 7 Polarization: -2.41 SS G_CDS: -3.91 Total: -6.31 kcal Atomic # 8 Polarization: -9.60 SS G_CDS: -3.25 Total: -12.85 kcal Atomic # 14 Polarization: -3.38 SS G_CDS: 2.13 Total: -1.25 kcal Total: -19.07 -0.81 -19.88 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_16915396.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.578 kcal (2) G-P(sol) polarization free energy of solvation -19.069 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds