Wall clock time and date at job start Mon Mar 8 2021 04:10:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42902 * 113.99918 * 2 1 4 4 H 1.09001 * 112.84915 * 341.19666 * 3 2 1 5 5 C 1.53781 * 113.68950 * 112.46250 * 3 2 1 6 6 C 1.53786 * 87.08180 * 139.99419 * 5 3 2 7 7 H 1.08992 * 113.69224 * 89.12171 * 6 5 3 8 8 N 1.46501 * 113.61120 * 220.02025 * 6 5 3 9 9 C 1.34773 * 119.99557 * 252.49135 * 8 6 5 10 10 O 1.21278 * 120.00306 * 0.02562 * 9 8 6 11 11 C 1.50703 * 119.99605 * 180.02562 * 9 8 6 12 12 O 1.42904 * 109.47031 * 180.02562 * 11 9 8 13 13 C 1.35895 * 117.00128 * 179.97438 * 12 11 9 14 14 C 1.38709 * 120.05826 * 180.02562 * 13 12 11 15 15 C 1.50705 * 120.02708 * 0.02562 * 14 13 12 16 16 O 1.42894 * 109.47235 * 74.97477 * 15 14 13 17 17 Si 1.86301 * 109.46994 * 194.97944 * 15 14 13 18 18 C 1.38164 * 119.94688 * 179.97438 * 14 13 12 19 19 C 1.38245 * 120.05645 * 0.02562 * 18 14 13 20 20 C 1.38290 * 120.10982 * 359.97438 * 19 18 14 21 21 C 1.38126 * 120.05768 * 0.02562 * 20 19 18 22 22 C 1.53780 * 113.61589 * 209.99634 * 3 2 1 23 23 H 1.08995 * 109.47579 * 300.00462 * 1 2 3 24 24 H 1.09004 * 109.46664 * 60.00439 * 1 2 3 25 25 H 1.09001 * 109.47083 * 179.97438 * 1 2 3 26 26 H 1.08996 * 113.61638 * 25.43928 * 5 3 2 27 27 H 1.09003 * 113.61216 * 254.53924 * 5 3 2 28 28 H 0.97002 * 120.00119 * 72.49523 * 8 6 5 29 29 H 1.09000 * 109.47423 * 60.00375 * 11 9 8 30 30 H 1.09002 * 109.47439 * 299.99751 * 11 9 8 31 31 H 1.08999 * 109.46349 * 314.97236 * 15 14 13 32 32 H 0.96700 * 113.99964 * 180.02562 * 16 15 14 33 33 H 1.48497 * 109.99657 * 178.67788 * 17 15 14 34 34 H 1.48503 * 109.99677 * 299.99415 * 17 15 14 35 35 H 1.08005 * 119.97654 * 179.97438 * 18 14 13 36 36 H 1.07995 * 119.94685 * 179.72562 * 19 18 14 37 37 H 1.07995 * 119.97112 * 180.02562 * 20 19 18 38 38 H 1.07998 * 120.03128 * 180.02562 * 21 20 19 39 39 H 1.09002 * 113.61482 * 105.38463 * 22 3 2 40 40 H 1.09001 * 113.61511 * 334.48710 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7530 1.6511 1.3014 6 6 3.8220 2.3200 0.4211 7 1 3.6221 3.3708 0.2117 8 7 5.1928 2.0820 0.8797 9 6 5.8936 3.0792 1.4549 10 8 5.3893 4.1734 1.5932 11 6 7.3040 2.8345 1.9261 12 8 7.8306 4.0343 2.4963 13 6 9.1020 3.9843 2.9738 14 6 9.6760 5.1124 3.5410 15 6 8.8901 6.3953 3.6292 16 8 7.9177 6.2876 4.6707 17 14 10.0464 7.8075 4.0025 18 6 10.9685 5.0588 4.0262 19 6 11.6899 3.8822 3.9462 20 6 11.1199 2.7560 3.3811 21 6 9.8281 2.8045 2.8946 22 6 3.3756 1.3720 -0.7044 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3633 -1.0277 -0.0005 26 1 3.1167 0.7772 1.8418 27 1 2.2131 2.3504 1.9398 28 1 5.5961 1.2067 0.7693 29 1 7.9222 2.5317 1.0809 30 1 7.3042 2.0450 2.6777 31 1 8.3870 6.5789 2.6798 32 1 7.3737 7.0790 4.7842 33 1 9.2881 9.0830 4.0604 34 1 10.7386 7.5691 5.2945 35 1 11.4161 5.9370 4.4677 36 1 12.7016 3.8434 4.3220 37 1 11.6853 1.8379 3.3201 38 1 9.3832 1.9246 2.4537 39 1 3.3382 1.8458 -1.6853 40 1 3.9095 0.4217 -0.7124 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:50 Heat of formation + Delta-G solvation = -81.165512 kcal Electronic energy + Delta-G solvation = -23180.427188 eV Core-core repulsion = 19542.888391 eV Total energy + Delta-G solvation = -3637.538796 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.62095 -41.02914 -39.81145 -38.37490 -37.45234 -37.23321 -34.30738 -32.82356 -31.25271 -29.53683 -27.81556 -26.86133 -26.55496 -25.05741 -23.37639 -22.42315 -21.65272 -21.07281 -19.32131 -18.38569 -18.33765 -18.08631 -17.38522 -17.11662 -16.90491 -16.77049 -16.19946 -16.12302 -15.52649 -15.42303 -15.31841 -15.00342 -14.90664 -14.55978 -13.81206 -13.76933 -13.69150 -13.59235 -13.37453 -12.97127 -12.85971 -12.65634 -12.27891 -12.25273 -12.11056 -11.94149 -11.72347 -11.65208 -10.86225 -10.55087 -10.25800 -10.15374 -9.93796 -9.16226 -4.88992 0.26372 0.46109 1.38391 1.45298 1.47711 1.66530 2.01717 2.50551 2.69442 2.86778 3.31088 3.43018 3.49245 3.54102 3.70562 3.75896 3.78238 3.87797 3.92268 3.94584 4.13904 4.20782 4.29324 4.36532 4.38673 4.40599 4.53738 4.60295 4.61725 4.67867 4.71160 4.82402 4.88121 4.95510 5.00085 5.29548 5.36593 5.39664 5.53530 5.73444 6.15316 6.25485 6.39571 6.65005 7.08806 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.169 4.169 6 C 0.126 3.874 7 H 0.121 0.879 8 N -0.715 5.715 9 C 0.518 3.482 10 O -0.511 6.511 11 C 0.039 3.961 12 O -0.280 6.280 13 C 0.151 3.849 14 C -0.101 4.101 15 C -0.066 4.066 16 O -0.530 6.530 17 Si 0.686 3.314 18 C -0.078 4.078 19 C -0.151 4.151 20 C -0.073 4.073 21 C -0.212 4.212 22 C -0.143 4.143 23 H 0.043 0.957 24 H 0.044 0.956 25 H 0.087 0.913 26 H 0.095 0.905 27 H 0.077 0.923 28 H 0.404 0.596 29 H 0.095 0.905 30 H 0.094 0.906 31 H 0.076 0.924 32 H 0.377 0.623 33 H -0.261 1.261 34 H -0.255 1.255 35 H 0.135 0.865 36 H 0.130 0.870 37 H 0.129 0.871 38 H 0.130 0.870 39 H 0.083 0.917 40 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.295 -3.197 -3.608 4.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.208 4.208 6 C 0.021 3.979 7 H 0.138 0.862 8 N -0.369 5.369 9 C 0.303 3.697 10 O -0.385 6.385 11 C -0.040 4.040 12 O -0.191 6.191 13 C 0.105 3.895 14 C -0.101 4.101 15 C -0.176 4.176 16 O -0.337 6.337 17 Si 0.587 3.413 18 C -0.096 4.096 19 C -0.169 4.169 20 C -0.091 4.091 21 C -0.231 4.231 22 C -0.181 4.181 23 H 0.062 0.938 24 H 0.062 0.938 25 H 0.106 0.894 26 H 0.114 0.886 27 H 0.095 0.905 28 H 0.239 0.761 29 H 0.113 0.887 30 H 0.112 0.888 31 H 0.094 0.906 32 H 0.225 0.775 33 H -0.187 1.187 34 H -0.180 1.180 35 H 0.152 0.848 36 H 0.148 0.852 37 H 0.147 0.853 38 H 0.148 0.852 39 H 0.102 0.898 40 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.369 -2.318 -2.899 3.956 hybrid contribution -1.152 -0.498 0.414 1.322 sum 0.217 -2.816 -2.485 3.762 Atomic orbital electron populations 1.22836 0.80679 1.03101 1.00183 1.87936 1.20071 1.26805 1.94556 1.23444 0.93765 0.85859 0.96417 0.88883 1.24032 0.97448 1.01465 0.97869 1.22231 0.79985 1.00674 0.94964 0.86158 1.45725 1.14956 1.14072 1.62148 1.20067 0.86891 0.84830 0.77918 1.90775 1.70446 1.23690 1.53555 1.22475 0.93387 0.88385 0.99774 1.86202 1.26139 1.33605 1.73201 1.18781 0.83305 0.93641 0.93793 1.18594 0.94484 0.93472 1.03600 1.24644 0.96691 1.02474 0.93777 1.86599 1.50024 1.42073 1.55040 0.95217 0.83620 0.75729 0.86730 1.20988 0.92851 0.98749 0.96976 1.21051 1.00731 0.92746 1.02394 1.21018 0.94071 0.98567 0.95429 1.21268 0.96861 0.97250 1.07704 1.23631 0.95708 1.00348 0.98459 0.93819 0.93772 0.89429 0.88645 0.90476 0.76105 0.88714 0.88814 0.90565 0.77502 1.18665 1.18020 0.84792 0.85228 0.85314 0.85237 0.89829 0.88382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.40 10.72 -35.23 -0.38 -0.78 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.16 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.17 0.07 7.71 -25.92 -0.20 -0.13 16 6 C 0.13 -0.08 4.24 -67.11 -0.28 -0.37 16 7 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 8 N -0.72 0.88 5.35 -53.02 -0.28 0.60 16 9 C 0.52 0.95 7.91 -10.99 -0.09 0.87 16 10 O -0.51 -3.40 16.10 -14.35 -0.23 -3.63 16 11 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 12 O -0.28 -1.08 9.00 -39.32 -0.35 -1.44 16 13 C 0.15 0.46 6.66 -39.21 -0.26 0.20 16 14 C -0.10 -0.32 5.30 -104.47 -0.55 -0.87 16 15 C -0.07 -0.18 2.37 36.01 0.09 -0.10 16 16 O -0.53 -2.31 12.86 -35.23 -0.45 -2.76 16 17 Si 0.69 0.42 30.20 -169.99 -5.13 -4.72 16 18 C -0.08 -0.12 8.66 -39.61 -0.34 -0.46 16 19 C -0.15 -0.06 10.04 -39.56 -0.40 -0.46 16 20 C -0.07 0.00 10.04 -39.60 -0.40 -0.40 16 21 C -0.21 -0.14 9.04 -39.43 -0.36 -0.49 16 22 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.40 -1.72 8.73 -40.82 -0.36 -2.08 16 29 H 0.10 -0.29 7.66 -51.93 -0.40 -0.69 16 30 H 0.09 -0.21 7.66 -51.93 -0.40 -0.61 16 31 H 0.08 0.21 7.83 -51.93 -0.41 -0.20 16 32 H 0.38 0.21 8.74 45.56 0.40 0.61 16 33 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 34 H -0.26 -0.73 6.75 56.52 0.38 -0.35 16 35 H 0.13 0.03 4.90 -52.48 -0.26 -0.23 16 36 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 37 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 38 H 0.13 -0.27 6.30 -52.49 -0.33 -0.60 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 40 H 0.10 -0.21 8.12 -51.93 -0.42 -0.63 16 LS Contribution 338.33 15.07 5.10 5.10 Total: 0.00 -9.96 338.33 -9.12 -19.08 By element: Atomic # 1 Polarization: -4.82 SS G_CDS: -5.57 Total: -10.39 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -1.82 Total: -1.06 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.28 Total: 0.60 kcal Atomic # 8 Polarization: -7.20 SS G_CDS: -1.42 Total: -8.61 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: -5.13 Total: -4.72 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -9.96 -9.12 -19.08 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.081 kcal (2) G-P(sol) polarization free energy of solvation -9.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.044 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.084 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds