Wall clock time and date at job start Mon Mar 8 2021 04:10:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42902 * 113.99918 * 2 1 4 4 H 1.09001 * 112.84915 * 341.19666 * 3 2 1 5 5 C 1.53781 * 113.68950 * 112.46250 * 3 2 1 6 6 C 1.53786 * 87.08180 * 139.99419 * 5 3 2 7 7 H 1.08992 * 113.69224 * 89.12171 * 6 5 3 8 8 N 1.46501 * 113.61120 * 220.02025 * 6 5 3 9 9 C 1.34773 * 119.99557 * 252.49135 * 8 6 5 10 10 O 1.21278 * 120.00306 * 0.02562 * 9 8 6 11 11 C 1.50703 * 119.99605 * 180.02562 * 9 8 6 12 12 O 1.42904 * 109.47031 * 180.02562 * 11 9 8 13 13 C 1.35895 * 117.00128 * 179.97438 * 12 11 9 14 14 C 1.38709 * 120.05826 * 180.02562 * 13 12 11 15 15 C 1.50705 * 120.02708 * 0.02562 * 14 13 12 16 16 O 1.42894 * 109.47235 * 74.97477 * 15 14 13 17 17 Si 1.86301 * 109.46994 * 194.97944 * 15 14 13 18 18 C 1.38164 * 119.94688 * 179.97438 * 14 13 12 19 19 C 1.38245 * 120.05645 * 0.02562 * 18 14 13 20 20 C 1.38290 * 120.10982 * 359.97438 * 19 18 14 21 21 C 1.38126 * 120.05768 * 0.02562 * 20 19 18 22 22 C 1.53780 * 113.61589 * 209.99634 * 3 2 1 23 23 H 1.08995 * 109.47579 * 300.00462 * 1 2 3 24 24 H 1.09004 * 109.46664 * 60.00439 * 1 2 3 25 25 H 1.09001 * 109.47083 * 179.97438 * 1 2 3 26 26 H 1.08996 * 113.61638 * 25.43928 * 5 3 2 27 27 H 1.09003 * 113.61216 * 254.53924 * 5 3 2 28 28 H 0.97002 * 120.00119 * 72.49523 * 8 6 5 29 29 H 1.09000 * 109.47423 * 60.00375 * 11 9 8 30 30 H 1.09002 * 109.47439 * 299.99751 * 11 9 8 31 31 H 1.08999 * 109.46349 * 314.97236 * 15 14 13 32 32 H 0.96700 * 113.99964 * 180.02562 * 16 15 14 33 33 H 1.48497 * 109.99657 * 178.67788 * 17 15 14 34 34 H 1.48503 * 109.99677 * 299.99415 * 17 15 14 35 35 H 1.08005 * 119.97654 * 179.97438 * 18 14 13 36 36 H 1.07995 * 119.94685 * 179.72562 * 19 18 14 37 37 H 1.07995 * 119.97112 * 180.02562 * 20 19 18 38 38 H 1.07998 * 120.03128 * 180.02562 * 21 20 19 39 39 H 1.09002 * 113.61482 * 105.38463 * 22 3 2 40 40 H 1.09001 * 113.61511 * 334.48710 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7530 1.6511 1.3014 6 6 3.8220 2.3200 0.4211 7 1 3.6221 3.3708 0.2117 8 7 5.1928 2.0820 0.8797 9 6 5.8936 3.0792 1.4549 10 8 5.3893 4.1734 1.5932 11 6 7.3040 2.8345 1.9261 12 8 7.8306 4.0343 2.4963 13 6 9.1020 3.9843 2.9738 14 6 9.6760 5.1124 3.5410 15 6 8.8901 6.3953 3.6292 16 8 7.9177 6.2876 4.6707 17 14 10.0464 7.8075 4.0025 18 6 10.9685 5.0588 4.0262 19 6 11.6899 3.8822 3.9462 20 6 11.1199 2.7560 3.3811 21 6 9.8281 2.8045 2.8946 22 6 3.3756 1.3720 -0.7044 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3633 -1.0277 -0.0005 26 1 3.1167 0.7772 1.8418 27 1 2.2131 2.3504 1.9398 28 1 5.5961 1.2067 0.7693 29 1 7.9222 2.5317 1.0809 30 1 7.3042 2.0450 2.6777 31 1 8.3870 6.5789 2.6798 32 1 7.3737 7.0790 4.7842 33 1 9.2881 9.0830 4.0604 34 1 10.7386 7.5691 5.2945 35 1 11.4161 5.9370 4.4677 36 1 12.7016 3.8434 4.3220 37 1 11.6853 1.8379 3.3201 38 1 9.3832 1.9246 2.4537 39 1 3.3382 1.8458 -1.6853 40 1 3.9095 0.4217 -0.7124 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:49 Heat of formation + Delta-G solvation = -83.328368 kcal Electronic energy + Delta-G solvation = -23180.520976 eV Core-core repulsion = 19542.888391 eV Total energy + Delta-G solvation = -3637.632585 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.68455 -41.05147 -39.87509 -38.46878 -37.63926 -37.26590 -34.38468 -32.87902 -31.26780 -29.55137 -27.73849 -26.79607 -26.66146 -25.04049 -23.39622 -22.48273 -21.72409 -21.03642 -19.36011 -18.60883 -18.35872 -18.12891 -17.42524 -17.18808 -16.90620 -16.77268 -16.19986 -16.12091 -15.55089 -15.52830 -15.42473 -15.06165 -14.93349 -14.62114 -13.95297 -13.83099 -13.73139 -13.51761 -13.41097 -13.08821 -12.79404 -12.64761 -12.24415 -12.19793 -12.11502 -11.89751 -11.82038 -11.77456 -11.02495 -10.51400 -10.44743 -10.19510 -9.96903 -9.21714 -4.97032 0.22953 0.42051 1.27330 1.37011 1.45225 1.56501 1.88548 2.52221 2.66406 2.92485 3.37383 3.43905 3.48596 3.54873 3.75635 3.77382 3.84705 3.93354 3.95744 4.05458 4.16115 4.24955 4.27591 4.34233 4.48942 4.52247 4.52391 4.66104 4.68402 4.69199 4.82955 4.91145 4.91567 4.97360 4.98051 5.28260 5.38411 5.39634 5.52782 5.75598 6.21556 6.25878 6.42388 6.55419 7.06150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.060 3.940 4 H 0.102 0.898 5 C -0.169 4.169 6 C 0.123 3.877 7 H 0.103 0.897 8 N -0.698 5.698 9 C 0.515 3.485 10 O -0.570 6.570 11 C 0.036 3.964 12 O -0.312 6.312 13 C 0.128 3.872 14 C -0.130 4.130 15 C -0.086 4.086 16 O -0.557 6.557 17 Si 0.781 3.219 18 C -0.089 4.089 19 C -0.155 4.155 20 C -0.074 4.074 21 C -0.212 4.212 22 C -0.130 4.130 23 H 0.045 0.955 24 H 0.052 0.948 25 H 0.093 0.907 26 H 0.094 0.906 27 H 0.066 0.934 28 H 0.421 0.579 29 H 0.128 0.872 30 H 0.118 0.882 31 H 0.066 0.934 32 H 0.388 0.612 33 H -0.290 1.290 34 H -0.283 1.283 35 H 0.142 0.858 36 H 0.152 0.848 37 H 0.157 0.843 38 H 0.157 0.843 39 H 0.092 0.908 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.543 -4.852 -4.220 6.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.002 3.998 4 H 0.120 0.880 5 C -0.208 4.208 6 C 0.018 3.982 7 H 0.121 0.879 8 N -0.351 5.351 9 C 0.301 3.699 10 O -0.448 6.448 11 C -0.042 4.042 12 O -0.225 6.225 13 C 0.082 3.918 14 C -0.131 4.131 15 C -0.194 4.194 16 O -0.366 6.366 17 Si 0.685 3.315 18 C -0.107 4.107 19 C -0.173 4.173 20 C -0.092 4.092 21 C -0.230 4.230 22 C -0.168 4.168 23 H 0.064 0.936 24 H 0.071 0.929 25 H 0.112 0.888 26 H 0.113 0.887 27 H 0.085 0.915 28 H 0.260 0.740 29 H 0.145 0.855 30 H 0.135 0.865 31 H 0.084 0.916 32 H 0.237 0.763 33 H -0.218 1.218 34 H -0.210 1.210 35 H 0.159 0.841 36 H 0.170 0.830 37 H 0.174 0.826 38 H 0.175 0.825 39 H 0.111 0.889 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 2.609 -4.042 -3.541 5.974 hybrid contribution -1.593 -0.057 0.608 1.706 sum 1.016 -4.099 -2.933 5.141 Atomic orbital electron populations 1.22959 0.79852 1.03745 1.00745 1.87899 1.21143 1.27665 1.94659 1.23551 0.94394 0.85622 0.96244 0.88049 1.24010 0.97591 1.01130 0.98037 1.22168 0.80191 1.00133 0.95732 0.87862 1.45610 1.14539 1.14306 1.60680 1.20547 0.87733 0.84335 0.77244 1.90748 1.71814 1.26074 1.56189 1.22717 0.92214 0.87793 1.01469 1.86152 1.26848 1.35700 1.73821 1.19055 0.83401 0.94653 0.94661 1.18870 0.95367 0.93927 1.04933 1.25054 0.97025 1.04269 0.93011 1.86550 1.50979 1.43445 1.55632 0.94096 0.81151 0.72147 0.84106 1.21155 0.92508 0.99798 0.97234 1.21403 1.01626 0.92392 1.01842 1.21414 0.93969 0.99454 0.94368 1.21607 0.97018 0.97224 1.07154 1.23561 0.94791 1.00250 0.98211 0.93592 0.92900 0.88812 0.88719 0.91498 0.74037 0.85478 0.86462 0.91600 0.76297 1.21759 1.20994 0.84083 0.83048 0.82553 0.82513 0.88931 0.87496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.39 -0.79 10.72 -148.98 -1.60 -2.39 16 3 C 0.06 -0.08 4.31 31.12 0.13 0.05 16 4 H 0.10 -0.34 7.87 -2.39 -0.02 -0.36 16 5 C -0.17 0.02 7.71 31.12 0.24 0.26 16 6 C 0.12 -0.08 4.24 45.52 0.19 0.11 16 7 H 0.10 0.34 7.46 -2.39 -0.02 0.32 16 8 N -0.70 1.71 5.35 -440.04 -2.36 -0.65 16 9 C 0.52 2.38 7.91 87.66 0.69 3.07 16 10 O -0.57 -9.07 16.10 16.01 0.26 -8.81 16 11 C 0.04 -0.02 5.22 71.24 0.37 0.35 16 12 O -0.31 -2.83 9.00 -73.33 -0.66 -3.49 16 13 C 0.13 0.86 6.66 22.51 0.15 1.01 16 14 C -0.13 -0.98 5.30 -19.77 -0.10 -1.09 16 15 C -0.09 -0.66 2.37 71.24 0.17 -0.49 16 16 O -0.56 -6.26 12.86 -148.98 -1.92 -8.18 16 17 Si 0.78 1.73 30.20 68.60 2.07 3.80 16 18 C -0.09 -0.30 8.66 22.25 0.19 -0.11 16 19 C -0.15 0.04 10.04 22.28 0.22 0.27 16 20 C -0.07 0.13 10.04 22.26 0.22 0.36 16 21 C -0.21 -0.02 9.04 22.37 0.20 0.19 16 22 C -0.13 0.53 7.66 31.12 0.24 0.77 16 23 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 24 H 0.05 -0.22 8.14 -2.38 -0.02 -0.23 16 25 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 26 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 27 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 28 H 0.42 -4.07 8.73 -92.71 -0.81 -4.88 16 29 H 0.13 -0.97 7.66 -2.39 -0.02 -0.99 16 30 H 0.12 -0.67 7.66 -2.39 -0.02 -0.69 16 31 H 0.07 0.55 7.83 -2.39 -0.02 0.54 16 32 H 0.39 1.48 8.74 -74.06 -0.65 0.83 16 33 H -0.29 -1.91 7.11 99.48 0.71 -1.21 16 34 H -0.28 -1.85 6.75 99.48 0.67 -1.18 16 35 H 0.14 0.10 4.90 -2.91 -0.01 0.09 16 36 H 0.15 -0.81 8.06 -2.91 -0.02 -0.83 16 37 H 0.16 -1.20 8.06 -2.91 -0.02 -1.23 16 38 H 0.16 -1.04 6.30 -2.91 -0.02 -1.06 16 39 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.11 -0.60 8.12 -2.39 -0.02 -0.62 16 Total: 0.00 -25.83 338.33 -0.43 -26.26 By element: Atomic # 1 Polarization: -12.08 SS G_CDS: -0.39 Total: -12.47 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: 4.16 Total: 5.92 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -2.36 Total: -0.65 kcal Atomic # 8 Polarization: -18.95 SS G_CDS: -3.91 Total: -22.86 kcal Atomic # 14 Polarization: 1.73 SS G_CDS: 2.07 Total: 3.80 kcal Total: -25.83 -0.43 -26.26 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.069 kcal (2) G-P(sol) polarization free energy of solvation -25.831 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds