Wall clock time and date at job start Mon Mar 8 2021 04:10:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42895 * 114.00138 * 2 1 4 4 H 1.09005 * 112.84666 * 18.81129 * 3 2 1 5 5 C 1.53781 * 113.61521 * 150.00471 * 3 2 1 6 6 C 1.53779 * 87.08234 * 139.98405 * 5 3 2 7 7 H 1.09000 * 113.61510 * 89.20303 * 6 5 3 8 8 N 1.46498 * 113.61166 * 220.01762 * 6 5 3 9 9 C 1.34777 * 119.99828 * 203.19166 * 8 6 5 10 10 O 1.21283 * 120.00222 * 0.28168 * 9 8 6 11 11 C 1.50703 * 120.00290 * 180.27728 * 9 8 6 12 12 O 1.42900 * 109.47361 * 180.02562 * 11 9 8 13 13 C 1.35902 * 116.99916 * 179.97438 * 12 11 9 14 14 C 1.38735 * 120.05203 * 359.73142 * 13 12 11 15 15 C 1.38147 * 119.93628 * 179.69615 * 14 13 12 16 16 C 1.38262 * 120.05894 * 0.59472 * 15 14 13 17 17 C 1.50701 * 119.94514 * 179.69946 * 16 15 14 18 18 O 1.42901 * 109.46985 * 119.97971 * 17 16 15 19 19 Si 1.86292 * 109.47337 * 359.97438 * 17 16 15 20 20 C 1.38264 * 120.10980 * 359.67927 * 16 15 14 21 21 C 1.38141 * 120.05764 * 0.02562 * 20 16 15 22 22 C 1.53783 * 87.17258 * 334.61120 * 6 5 3 23 23 H 1.08994 * 109.47346 * 59.99401 * 1 2 3 24 24 H 1.09002 * 109.46994 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47066 * 299.99436 * 1 2 3 26 26 H 1.08996 * 113.61413 * 25.43324 * 5 3 2 27 27 H 1.09000 * 113.68872 * 254.54340 * 5 3 2 28 28 H 0.97001 * 120.00384 * 23.47613 * 8 6 5 29 29 H 1.08998 * 109.46954 * 300.00581 * 11 9 8 30 30 H 1.09002 * 109.46946 * 59.99717 * 11 9 8 31 31 H 1.07996 * 120.03150 * 359.97438 * 14 13 12 32 32 H 1.08008 * 119.97068 * 180.27478 * 15 14 13 33 33 H 1.09003 * 109.47333 * 239.97432 * 17 16 15 34 34 H 0.96698 * 114.00044 * 299.99816 * 18 17 16 35 35 H 1.48501 * 109.99826 * 58.68061 * 19 17 16 36 36 H 1.48499 * 110.00339 * 179.97438 * 19 17 16 37 37 H 1.08009 * 119.97151 * 180.02562 * 20 16 15 38 38 H 1.08002 * 120.02694 * 179.97438 * 21 20 16 39 39 H 1.08995 * 113.61864 * 139.94177 * 22 6 5 40 40 H 1.08999 * 113.60888 * 270.84219 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 0.3239 5 6 3.3756 1.3718 0.7044 6 6 3.8227 2.3181 -0.4223 7 1 3.6236 3.3694 -0.2142 8 7 5.1934 2.0786 -0.8804 9 6 5.8821 3.0639 -1.4897 10 8 5.3690 4.1505 -1.6541 11 6 7.2900 2.8157 -1.9666 12 8 7.8035 4.0030 -2.5739 13 6 9.0714 3.9485 -3.0601 14 6 9.8081 2.7780 -2.9499 15 6 11.0944 2.7233 -3.4506 16 6 11.6522 3.8374 -4.0501 17 6 13.0581 3.7769 -4.5894 18 8 13.0423 4.0489 -5.9922 19 14 13.7640 2.0784 -4.2940 20 6 10.9220 5.0067 -4.1561 21 6 9.6331 5.0648 -3.6625 22 6 2.7532 1.6512 -1.3033 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5137 0.8900 26 1 3.9088 0.4212 0.7136 27 1 3.3399 1.8465 1.6849 28 1 5.6039 1.2096 -0.7490 29 1 7.9176 2.5409 -1.1189 30 1 7.2891 2.0054 -2.6956 31 1 9.3747 1.9091 -2.4771 32 1 11.6668 1.8110 -3.3690 33 1 13.6741 4.5195 -4.0822 34 1 12.5119 3.4260 -6.5077 35 1 12.9153 1.0539 -4.9538 36 1 15.1501 2.0055 -4.8219 37 1 11.3598 5.8755 -4.6253 38 1 9.0634 5.9785 -3.7452 39 1 2.2144 2.3514 -1.9416 40 1 3.1160 0.7771 -1.8441 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:52 Heat of formation + Delta-G solvation = -86.929379 kcal Electronic energy + Delta-G solvation = -22560.097208 eV Core-core repulsion = 18922.308472 eV Total energy + Delta-G solvation = -3637.788737 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.64600 -41.01725 -39.91090 -38.96823 -37.36223 -37.14767 -34.36230 -32.38533 -31.73867 -29.73829 -27.73980 -26.78103 -26.27932 -24.96798 -23.84639 -22.39426 -21.72483 -21.03107 -19.52585 -18.54256 -18.15363 -18.11364 -17.44534 -16.95471 -16.85230 -16.52925 -16.22950 -16.10397 -15.87338 -15.54099 -15.47389 -15.09509 -14.70561 -14.59963 -14.36934 -13.74947 -13.66671 -13.49893 -13.47108 -13.32713 -12.77368 -12.31363 -12.22007 -12.17012 -12.13187 -12.05325 -11.86886 -11.62701 -11.01105 -10.58929 -10.49626 -10.17494 -10.03731 -9.23642 -4.90234 0.27244 0.30926 1.34436 1.39654 1.45882 1.62119 1.99279 2.52984 2.65007 2.94177 3.38932 3.44240 3.50936 3.55578 3.73746 3.77564 3.82441 3.87437 3.94784 4.03545 4.09589 4.29111 4.31099 4.42716 4.50597 4.53750 4.56383 4.69367 4.70963 4.71358 4.84687 4.93434 4.93747 4.97441 5.00467 5.15909 5.25587 5.41317 5.49417 5.69751 6.23065 6.26169 6.44788 6.50906 7.08984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.059 3.941 4 H 0.101 0.899 5 C -0.130 4.130 6 C 0.123 3.877 7 H 0.103 0.897 8 N -0.697 5.697 9 C 0.514 3.486 10 O -0.573 6.573 11 C 0.036 3.964 12 O -0.320 6.320 13 C 0.121 3.879 14 C -0.200 4.200 15 C -0.075 4.075 16 C -0.159 4.159 17 C -0.082 4.082 18 O -0.552 6.552 19 Si 0.772 3.228 20 C -0.060 4.060 21 C -0.167 4.167 22 C -0.168 4.168 23 H 0.046 0.954 24 H 0.093 0.907 25 H 0.052 0.948 26 H 0.107 0.893 27 H 0.092 0.908 28 H 0.422 0.578 29 H 0.130 0.870 30 H 0.125 0.875 31 H 0.165 0.835 32 H 0.154 0.846 33 H 0.121 0.879 34 H 0.385 0.615 35 H -0.279 1.279 36 H -0.308 1.308 37 H 0.133 0.867 38 H 0.126 0.874 39 H 0.066 0.934 40 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.547 -6.591 4.644 8.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.001 3.999 4 H 0.119 0.881 5 C -0.168 4.168 6 C 0.018 3.982 7 H 0.121 0.879 8 N -0.351 5.351 9 C 0.300 3.700 10 O -0.452 6.452 11 C -0.041 4.041 12 O -0.234 6.234 13 C 0.076 3.924 14 C -0.218 4.218 15 C -0.093 4.093 16 C -0.159 4.159 17 C -0.191 4.191 18 O -0.360 6.360 19 Si 0.678 3.322 20 C -0.078 4.078 21 C -0.186 4.186 22 C -0.207 4.207 23 H 0.064 0.936 24 H 0.112 0.888 25 H 0.071 0.929 26 H 0.126 0.874 27 H 0.110 0.890 28 H 0.261 0.739 29 H 0.148 0.852 30 H 0.143 0.857 31 H 0.183 0.817 32 H 0.171 0.829 33 H 0.139 0.861 34 H 0.235 0.765 35 H -0.205 1.205 36 H -0.237 1.237 37 H 0.151 0.849 38 H 0.144 0.856 39 H 0.085 0.915 40 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.248 -6.050 4.366 7.465 hybrid contribution -0.751 0.249 -1.266 1.493 sum -0.999 -5.802 3.099 6.653 Atomic orbital electron populations 1.22956 0.79877 1.03728 1.00735 1.87895 1.21114 1.27702 1.94662 1.23595 0.94414 0.85587 0.96329 0.88131 1.23550 0.94765 1.00295 0.98181 1.22160 0.80274 1.00085 0.95699 0.87942 1.45613 1.14704 1.15453 1.59345 1.20613 0.87844 0.84149 0.77379 1.90761 1.71339 1.26377 1.56677 1.22755 0.92173 0.87965 1.01233 1.86128 1.27315 1.37229 1.72686 1.19219 0.83462 0.95178 0.94579 1.21506 0.96039 0.97940 1.06356 1.21070 0.94641 0.97942 0.95615 1.20294 0.97446 0.94694 1.03475 1.25248 0.96278 1.14789 0.82770 1.86568 1.74288 1.57089 1.18029 0.94141 0.75274 0.72263 0.90567 1.20907 0.92445 0.98203 0.96290 1.20623 0.96518 0.98185 1.03235 1.24035 0.97577 1.01146 0.97971 0.93578 0.88833 0.92943 0.87425 0.88964 0.73939 0.85235 0.85734 0.81742 0.82920 0.86072 0.76535 1.20493 1.23656 0.84878 0.85606 0.91481 0.88657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.39 -0.49 10.72 -148.98 -1.60 -2.09 16 3 C 0.06 -0.13 4.31 31.18 0.13 0.00 16 4 H 0.10 -0.41 7.87 -2.38 -0.02 -0.43 16 5 C -0.13 0.67 7.66 31.12 0.24 0.90 16 6 C 0.12 -0.24 4.21 45.52 0.19 -0.05 16 7 H 0.10 0.21 7.50 -2.39 -0.02 0.19 16 8 N -0.70 2.99 5.36 -440.03 -2.36 0.63 16 9 C 0.51 1.22 7.91 87.66 0.69 1.92 16 10 O -0.57 -8.10 16.12 16.00 0.26 -7.84 16 11 C 0.04 -0.14 5.22 71.24 0.37 0.24 16 12 O -0.32 -1.81 9.67 -73.41 -0.71 -2.52 16 13 C 0.12 0.38 6.69 22.51 0.15 0.53 16 14 C -0.20 0.59 9.04 22.37 0.20 0.80 16 15 C -0.08 0.24 8.66 22.25 0.19 0.43 16 16 C -0.16 0.01 5.39 -19.85 -0.11 -0.10 16 17 C -0.08 0.07 2.82 71.24 0.20 0.27 16 18 O -0.55 -1.57 12.77 -148.98 -1.90 -3.47 16 19 Si 0.77 -2.50 29.78 68.60 2.04 -0.45 16 20 C -0.06 -0.16 9.60 22.25 0.21 0.05 16 21 C -0.17 -0.79 9.99 22.36 0.22 -0.57 16 22 C -0.17 0.22 7.73 31.18 0.24 0.46 16 23 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 24 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 25 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 26 H 0.11 -0.73 8.11 -2.39 -0.02 -0.75 16 27 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 28 H 0.42 -4.94 8.71 -92.71 -0.81 -5.75 16 29 H 0.13 -1.38 7.65 -2.39 -0.02 -1.40 16 30 H 0.13 -1.23 7.68 -2.39 -0.02 -1.25 16 31 H 0.17 -1.70 6.30 -2.91 -0.02 -1.72 16 32 H 0.15 -1.26 4.87 -2.91 -0.01 -1.27 16 33 H 0.12 -0.23 7.96 -2.39 -0.02 -0.25 16 34 H 0.39 -1.06 8.70 -74.06 -0.64 -1.71 16 35 H -0.28 0.07 7.11 99.48 0.71 0.78 16 36 H -0.31 -1.62 7.11 99.48 0.71 -0.92 16 37 H 0.13 0.25 8.06 -2.91 -0.02 0.22 16 38 H 0.13 0.68 8.06 -2.91 -0.02 0.65 16 39 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 40 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 Total: 0.00 -24.47 339.03 -0.44 -24.90 By element: Atomic # 1 Polarization: -14.85 SS G_CDS: -0.35 Total: -15.20 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: 4.18 Total: 6.04 kcal Atomic # 7 Polarization: 2.99 SS G_CDS: -2.36 Total: 0.63 kcal Atomic # 8 Polarization: -11.97 SS G_CDS: -3.95 Total: -15.92 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: 2.04 Total: -0.45 kcal Total: -24.47 -0.44 -24.90 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.028 kcal (2) G-P(sol) polarization free energy of solvation -24.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds