Wall clock time and date at job start Mon Mar 8 2021 04:10:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42904 * 114.00043 * 2 1 4 4 H 1.09000 * 112.90857 * 18.75079 * 3 2 1 5 5 C 1.53781 * 113.61326 * 150.00222 * 3 2 1 6 6 C 1.53788 * 87.07973 * 139.98065 * 5 3 2 7 7 H 1.09005 * 113.61146 * 89.19726 * 6 5 3 8 8 N 1.46496 * 113.61381 * 220.01719 * 6 5 3 9 9 C 1.34777 * 119.99875 * 204.99868 * 8 6 5 10 10 O 1.21279 * 120.00162 * 0.02562 * 9 8 6 11 11 C 1.50706 * 120.00146 * 180.02562 * 9 8 6 12 12 C 1.52999 * 109.46953 * 180.02562 * 11 9 8 13 13 O 1.42905 * 109.46728 * 180.02562 * 12 11 9 14 14 C 1.35896 * 117.00039 * 179.97438 * 13 12 11 15 15 C 1.38738 * 120.05353 * 359.72616 * 14 13 12 16 16 C 1.38148 * 119.94048 * 179.74738 * 15 14 13 17 17 C 1.38261 * 120.05800 * 0.50500 * 16 15 14 18 18 C 1.50703 * 119.94589 * 179.75166 * 17 16 15 19 19 O 1.42902 * 109.46840 * 245.01936 * 18 17 16 20 20 Si 1.86294 * 109.47009 * 5.01633 * 18 17 16 21 21 C 1.38262 * 120.11048 * 359.76434 * 17 16 15 22 22 C 1.38145 * 120.05942 * 359.97438 * 21 17 16 23 23 C 1.53779 * 87.08114 * 334.57101 * 6 5 3 24 24 H 1.09007 * 109.47086 * 299.99602 * 1 2 3 25 25 H 1.09000 * 109.47599 * 59.99114 * 1 2 3 26 26 H 1.08992 * 109.47342 * 180.02562 * 1 2 3 27 27 H 1.09007 * 113.61515 * 25.43775 * 5 3 2 28 28 H 1.08996 * 113.61914 * 254.52838 * 5 3 2 29 29 H 0.96999 * 120.00082 * 25.00887 * 8 6 5 30 30 H 1.09000 * 109.46974 * 60.00144 * 11 9 8 31 31 H 1.09001 * 109.46547 * 300.00234 * 11 9 8 32 32 H 1.09000 * 109.47486 * 60.00062 * 12 11 9 33 33 H 1.09001 * 109.47362 * 299.99339 * 12 11 9 34 34 H 1.07995 * 120.02746 * 359.97438 * 15 14 13 35 35 H 1.08004 * 119.97067 * 180.22662 * 16 15 14 36 36 H 1.08995 * 109.47668 * 125.02330 * 18 17 16 37 37 H 0.96699 * 113.99859 * 59.99468 * 19 18 17 38 38 H 1.48504 * 110.00165 * 58.68385 * 20 18 17 39 39 H 1.48498 * 109.99950 * 180.02562 * 20 18 17 40 40 H 1.08009 * 119.97583 * 179.97438 * 21 17 16 41 41 H 1.08000 * 120.03441 * 179.97438 * 22 21 17 42 42 H 1.08997 * 113.61874 * 139.98174 * 23 6 5 43 43 H 1.09009 * 113.61260 * 270.87959 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3227 5 6 3.3755 1.3719 0.7045 6 6 3.8227 2.3182 -0.4223 7 1 3.6235 3.3695 -0.2143 8 7 5.1934 2.0786 -0.8805 9 6 5.8949 3.0746 -1.4570 10 8 5.3917 4.1692 -1.5960 11 6 7.3048 2.8281 -1.9288 12 6 7.8700 4.1120 -2.5396 13 8 9.2067 3.8780 -2.9876 14 6 9.8577 4.9246 -3.5600 15 6 9.2209 6.1501 -3.6931 16 6 9.8867 7.2139 -4.2706 17 6 11.1827 7.0553 -4.7252 18 6 11.9046 8.2160 -5.3599 19 8 12.1662 7.9206 -6.7334 20 14 10.8455 9.7442 -5.2442 21 6 11.8175 5.8335 -4.5988 22 6 11.1581 4.7680 -4.0172 23 6 2.7533 1.6490 -1.3018 24 1 -0.3634 0.5138 0.8901 25 1 -0.3634 0.5140 -0.8899 26 1 -0.3633 -1.0276 0.0005 27 1 3.9089 0.4212 0.7136 28 1 3.3385 1.8470 1.6847 29 1 5.5960 1.2032 -0.7690 30 1 7.3037 2.0379 -2.6796 31 1 7.9230 2.5254 -1.0836 32 1 7.8711 4.9019 -1.7885 33 1 7.2519 4.4151 -3.3847 34 1 8.2070 6.2732 -3.3421 35 1 9.3927 8.1691 -4.3711 36 1 12.8468 8.3865 -4.8392 37 1 11.3711 7.7572 -7.2589 38 1 10.5398 10.0439 -3.8222 39 1 11.5460 10.8959 -5.8672 40 1 12.8298 5.7119 -4.9551 41 1 11.6542 3.8137 -3.9190 42 1 2.2139 2.3478 -1.9411 43 1 3.1165 0.7741 -1.8412 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:10:56 Heat of formation + Delta-G solvation = -96.007318 kcal Electronic energy + Delta-G solvation = -24111.611522 eV Core-core repulsion = 20317.891518 eV Total energy + Delta-G solvation = -3793.720004 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.49111 -41.12340 -39.92980 -39.12059 -37.32801 -37.14323 -34.34411 -33.17903 -32.02262 -31.39590 -27.87252 -26.84500 -26.69306 -25.88747 -24.52687 -23.33130 -22.20773 -21.55851 -20.90706 -19.50644 -18.39988 -18.19546 -17.72023 -17.48176 -17.07230 -16.82682 -16.45825 -16.26931 -16.10882 -15.94167 -15.79658 -15.51943 -15.10321 -14.70134 -14.58782 -14.36204 -14.28642 -14.11619 -13.58086 -13.49843 -13.42724 -12.87744 -12.84307 -12.76241 -12.22063 -12.18029 -12.14467 -12.04457 -11.87036 -11.78198 -11.71666 -11.03857 -10.49061 -10.41751 -10.11391 -10.05057 -9.22416 -5.01474 0.27532 0.29726 1.31815 1.48837 1.62150 1.69043 1.94656 2.43284 2.65164 2.95969 3.42194 3.52332 3.54564 3.57097 3.71864 3.78695 3.83094 3.85523 3.90724 3.91340 4.02858 4.25454 4.29930 4.34190 4.44062 4.49653 4.51292 4.53781 4.64934 4.68643 4.71561 4.71667 4.77693 4.84773 4.93814 4.95209 4.96901 5.03815 5.17205 5.27914 5.46127 5.48846 5.71293 6.24258 6.31550 6.45150 6.78127 7.13037 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.059 3.941 4 H 0.102 0.898 5 C -0.135 4.135 6 C 0.123 3.877 7 H 0.106 0.894 8 N -0.704 5.704 9 C 0.521 3.479 10 O -0.582 6.582 11 C -0.133 4.133 12 C 0.073 3.927 13 O -0.321 6.321 14 C 0.123 3.877 15 C -0.209 4.209 16 C -0.078 4.078 17 C -0.163 4.163 18 C -0.066 4.066 19 O -0.556 6.556 20 Si 0.768 3.232 21 C -0.060 4.060 22 C -0.159 4.159 23 C -0.166 4.166 24 H 0.052 0.948 25 H 0.047 0.953 26 H 0.092 0.908 27 H 0.103 0.897 28 H 0.089 0.911 29 H 0.419 0.581 30 H 0.127 0.873 31 H 0.127 0.873 32 H 0.065 0.935 33 H 0.068 0.932 34 H 0.141 0.859 35 H 0.146 0.854 36 H 0.107 0.893 37 H 0.395 0.605 38 H -0.289 1.289 39 H -0.298 1.298 40 H 0.139 0.861 41 H 0.141 0.859 42 H 0.070 0.930 43 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.798 -3.768 1.065 5.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.316 6.316 3 C 0.000 4.000 4 H 0.120 0.880 5 C -0.173 4.173 6 C 0.017 3.983 7 H 0.124 0.876 8 N -0.356 5.356 9 C 0.309 3.691 10 O -0.462 6.462 11 C -0.173 4.173 12 C -0.003 4.003 13 O -0.235 6.235 14 C 0.077 3.923 15 C -0.228 4.228 16 C -0.095 4.095 17 C -0.163 4.163 18 C -0.176 4.176 19 O -0.364 6.364 20 Si 0.675 3.325 21 C -0.078 4.078 22 C -0.178 4.178 23 C -0.206 4.206 24 H 0.070 0.930 25 H 0.066 0.934 26 H 0.111 0.889 27 H 0.121 0.879 28 H 0.108 0.892 29 H 0.257 0.743 30 H 0.145 0.855 31 H 0.145 0.855 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.159 0.841 35 H 0.163 0.837 36 H 0.124 0.876 37 H 0.245 0.755 38 H -0.216 1.216 39 H -0.226 1.226 40 H 0.157 0.843 41 H 0.159 0.841 42 H 0.088 0.912 43 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -3.456 -2.494 1.511 4.522 hybrid contribution 0.201 -0.319 0.354 0.517 sum -3.255 -2.813 1.865 4.688 Atomic orbital electron populations 1.22954 0.79850 1.03709 1.00771 1.87902 1.21163 1.27813 1.94685 1.23583 0.94323 0.85562 0.96491 0.88014 1.23575 0.95005 1.00312 0.98370 1.22151 0.80658 1.00043 0.95429 0.87558 1.45800 1.14511 1.14733 1.60561 1.20673 0.87977 0.83886 0.76571 1.90730 1.72427 1.25702 1.57366 1.21445 0.92101 0.99106 1.04626 1.22465 0.80186 0.98281 0.99363 1.85959 1.28614 1.35274 1.73697 1.19188 0.92457 0.86860 0.93752 1.21433 1.02032 0.92978 1.06351 1.20992 0.93601 0.98634 0.96309 1.20327 0.95403 0.96707 1.03881 1.25047 1.05002 1.03363 0.84216 1.86460 1.37863 1.93293 1.18784 0.93805 0.84705 0.73601 0.80375 1.20981 1.00096 0.91318 0.95442 1.20668 0.92750 1.01091 1.03249 1.23982 0.97549 1.01140 0.97879 0.92965 0.93446 0.88908 0.87910 0.89194 0.74340 0.85524 0.85539 0.91637 0.91370 0.84104 0.83671 0.87590 0.75544 1.21633 1.22604 0.84330 0.84087 0.91152 0.88913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.66 10.71 -148.98 -1.60 -2.26 16 3 C 0.06 -0.12 4.31 31.12 0.13 0.01 16 4 H 0.10 -0.44 7.87 -2.39 -0.02 -0.46 16 5 C -0.13 0.59 7.66 31.12 0.24 0.83 16 6 C 0.12 -0.28 4.24 45.52 0.19 -0.09 16 7 H 0.11 0.09 7.46 -2.38 -0.02 0.07 16 8 N -0.70 2.92 5.35 -440.03 -2.36 0.56 16 9 C 0.52 0.08 7.83 87.66 0.69 0.76 16 10 O -0.58 -5.13 15.58 -3.03 -0.05 -5.17 16 11 C -0.13 0.62 6.07 29.85 0.18 0.80 16 12 C 0.07 0.02 4.03 71.98 0.29 0.31 16 13 O -0.32 -1.00 10.14 -92.39 -0.94 -1.94 16 14 C 0.12 0.51 6.69 22.51 0.15 0.66 16 15 C -0.21 -0.55 9.04 22.37 0.20 -0.34 16 16 C -0.08 -0.08 8.66 22.25 0.19 0.11 16 17 C -0.16 -0.29 5.35 -19.85 -0.11 -0.40 16 18 C -0.07 -0.05 2.80 71.24 0.20 0.15 16 19 O -0.56 -0.72 12.83 -148.98 -1.91 -2.63 16 20 Si 0.77 -0.48 29.80 68.60 2.04 1.56 16 21 C -0.06 -0.15 9.68 22.25 0.22 0.06 16 22 C -0.16 -0.51 9.99 22.37 0.22 -0.28 16 23 C -0.17 0.28 7.71 31.12 0.24 0.52 16 24 H 0.05 -0.24 8.14 -2.38 -0.02 -0.26 16 25 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 27 H 0.10 -0.54 8.12 -2.38 -0.02 -0.56 16 28 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 29 H 0.42 -4.09 8.73 -92.71 -0.81 -4.90 16 30 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 31 H 0.13 -1.04 8.14 -2.39 -0.02 -1.06 16 32 H 0.07 0.11 7.63 -2.39 -0.02 0.09 16 33 H 0.07 0.09 7.61 -2.39 -0.02 0.07 16 34 H 0.14 0.09 6.30 -2.91 -0.02 0.07 16 35 H 0.15 -0.48 4.90 -2.91 -0.01 -0.50 16 36 H 0.11 0.19 7.96 -2.39 -0.02 0.17 16 37 H 0.39 -2.60 8.70 -74.06 -0.64 -3.24 16 38 H -0.29 -1.31 7.11 99.48 0.71 -0.61 16 39 H -0.30 -1.97 7.11 99.48 0.71 -1.27 16 40 H 0.14 0.09 8.06 -2.91 -0.02 0.07 16 41 H 0.14 0.10 8.06 -2.91 -0.02 0.08 16 42 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 43 H 0.09 -0.11 8.14 -2.38 -0.02 -0.13 16 Total: 0.00 -19.25 360.07 -0.92 -20.17 By element: Atomic # 1 Polarization: -14.19 SS G_CDS: -0.39 Total: -14.57 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 4.27 Total: 4.27 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -2.36 Total: 0.56 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -4.49 Total: -12.00 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: 2.04 Total: 1.56 kcal Total: -19.25 -0.92 -20.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.834 kcal (2) G-P(sol) polarization free energy of solvation -19.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds