Wall clock time and date at job start Mon Mar 8 2021 04:11:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42901 * 114.00169 * 2 1 4 4 H 1.08993 * 112.84897 * 341.20626 * 3 2 1 5 5 C 1.53960 * 113.66607 * 112.44230 * 3 2 1 6 6 C 1.53779 * 87.01896 * 139.93474 * 5 3 2 7 7 H 1.08999 * 113.61541 * 89.23491 * 6 5 3 8 8 N 1.46498 * 113.61460 * 220.04910 * 6 5 3 9 9 C 1.34773 * 120.00182 * 254.13680 * 8 6 5 10 10 O 1.21279 * 120.00344 * 0.02562 * 9 8 6 11 11 C 1.50703 * 120.00193 * 179.97438 * 9 8 6 12 12 C 1.52998 * 109.47225 * 180.02562 * 11 9 8 13 13 O 1.42901 * 109.47046 * 180.02562 * 12 11 9 14 14 C 1.35905 * 116.99604 * 180.02562 * 13 12 11 15 15 C 1.38719 * 120.05115 * 180.02562 * 14 13 12 16 16 C 1.38169 * 119.93968 * 179.97438 * 15 14 13 17 17 C 1.50698 * 119.96631 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.47259 * 65.00142 * 17 16 15 19 19 Si 1.86303 * 109.46952 * 184.99619 * 17 16 15 20 20 C 1.38240 * 120.05585 * 359.97299 * 16 15 14 21 21 C 1.38282 * 120.11355 * 0.02562 * 20 16 15 22 22 C 1.38124 * 120.05644 * 359.74998 * 21 20 16 23 23 C 1.53782 * 113.61602 * 210.00239 * 3 2 1 24 24 H 1.08999 * 109.47564 * 59.99118 * 1 2 3 25 25 H 1.08999 * 109.46939 * 179.97438 * 1 2 3 26 26 H 1.09005 * 109.46681 * 299.99632 * 1 2 3 27 27 H 1.09005 * 113.61053 * 25.41912 * 5 3 2 28 28 H 1.08999 * 113.66799 * 254.46325 * 5 3 2 29 29 H 0.97005 * 119.99895 * 74.13793 * 8 6 5 30 30 H 1.08999 * 109.46845 * 60.00204 * 11 9 8 31 31 H 1.08996 * 109.47472 * 300.00289 * 11 9 8 32 32 H 1.08999 * 109.47084 * 60.00299 * 12 11 9 33 33 H 1.08998 * 109.47592 * 300.00401 * 12 11 9 34 34 H 1.07996 * 120.02463 * 359.95185 * 15 14 13 35 35 H 1.08999 * 109.47407 * 304.99703 * 17 16 15 36 36 H 0.96698 * 114.00182 * 59.99194 * 18 17 16 37 37 H 1.48498 * 110.00296 * 180.02562 * 19 17 16 38 38 H 1.48503 * 110.00062 * 301.32290 * 19 17 16 39 39 H 1.08001 * 119.93843 * 180.02562 * 20 16 15 40 40 H 1.08006 * 119.97245 * 180.02562 * 21 20 16 41 41 H 1.08001 * 120.02871 * 180.27359 * 22 21 20 42 42 H 1.08997 * 113.61191 * 105.47383 * 23 3 2 43 43 H 1.08993 * 113.69039 * 334.58258 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 -0.3236 5 6 2.7534 1.6510 1.3033 6 6 3.8227 2.3181 0.4222 7 1 3.6236 3.3694 0.2144 8 7 5.1935 2.0785 0.8803 9 6 5.8843 3.0655 1.4845 10 8 5.3710 4.1518 1.6496 11 6 7.2942 2.8189 1.9562 12 6 7.8457 4.0912 2.6025 13 8 9.1828 3.8575 3.0493 14 6 9.8222 4.8947 3.6513 15 6 11.1224 4.7378 4.1089 16 6 11.7705 5.7939 4.7202 17 6 13.1827 5.6239 5.2180 18 8 14.0546 5.3968 4.1088 19 14 13.7131 7.1657 6.1193 20 6 11.1245 7.0062 4.8755 21 6 9.8285 7.1651 4.4202 22 6 9.1779 6.1138 3.8042 23 6 3.3755 1.3719 -0.7046 24 1 -0.3634 0.5140 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8901 27 1 3.1163 0.7768 1.8439 28 1 2.2147 2.3513 1.9417 29 1 5.6039 1.2095 0.7486 30 1 7.9185 2.5426 1.1065 31 1 7.2967 2.0102 2.6870 32 1 7.2213 4.3671 3.4523 33 1 7.8432 4.9003 1.8721 34 1 11.6273 3.7908 3.9877 35 1 13.2287 4.7722 5.8967 36 1 14.0645 6.1160 3.4625 37 1 15.1045 7.0111 6.6147 38 1 13.6244 8.3393 5.2138 39 1 11.6331 7.8305 5.3532 40 1 9.3262 8.1134 4.5423 41 1 8.1672 6.2398 3.4449 42 1 3.3383 1.8472 -1.6847 43 1 3.9097 0.4219 -0.7148 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:00 Heat of formation + Delta-G solvation = -95.040645 kcal Electronic energy + Delta-G solvation = -24146.114674 eV Core-core repulsion = 20352.436588 eV Total energy + Delta-G solvation = -3793.678086 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.48251 -41.11448 -39.94047 -39.06839 -37.39495 -37.25458 -34.34812 -33.13484 -32.43751 -30.77848 -27.95955 -27.06731 -26.87554 -26.00847 -24.24682 -23.63564 -22.05326 -21.55407 -20.98521 -19.32791 -18.34109 -18.18150 -17.64343 -17.48590 -17.13467 -17.00949 -16.74598 -16.34062 -16.14868 -16.12352 -15.79807 -15.45959 -15.12106 -14.89418 -14.56215 -14.31945 -14.15082 -14.04976 -13.60487 -13.47788 -13.21688 -12.94588 -12.86483 -12.84591 -12.38668 -12.26210 -12.23197 -11.95273 -11.88593 -11.80757 -11.51720 -10.99488 -10.60819 -10.56047 -10.15758 -9.89536 -9.20520 -4.93192 0.25609 0.45371 1.28765 1.47754 1.62114 1.66732 1.97946 2.40041 2.71287 2.85645 3.31030 3.40428 3.42670 3.50105 3.66031 3.69031 3.75273 3.82470 3.85123 3.92847 4.08832 4.19332 4.24742 4.29821 4.35375 4.38300 4.39614 4.55573 4.58230 4.59122 4.61025 4.61779 4.70402 4.73906 4.81806 4.86826 4.96011 5.01572 5.30914 5.37518 5.42239 5.48598 5.72632 6.14767 6.32026 6.41155 6.42122 7.05941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.168 4.168 6 C 0.123 3.877 7 H 0.119 0.881 8 N -0.716 5.716 9 C 0.522 3.478 10 O -0.539 6.539 11 C -0.142 4.142 12 C 0.075 3.925 13 O -0.316 6.316 14 C 0.132 3.868 15 C -0.125 4.125 16 C -0.080 4.080 17 C -0.076 4.076 18 O -0.528 6.528 19 Si 0.691 3.309 20 C -0.156 4.156 21 C -0.073 4.073 22 C -0.202 4.202 23 C -0.144 4.144 24 H 0.044 0.956 25 H 0.087 0.913 26 H 0.043 0.957 27 H 0.095 0.905 28 H 0.076 0.924 29 H 0.405 0.595 30 H 0.108 0.892 31 H 0.108 0.892 32 H 0.073 0.927 33 H 0.072 0.928 34 H 0.134 0.866 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.257 1.257 38 H -0.260 1.260 39 H 0.129 0.871 40 H 0.130 0.870 41 H 0.132 0.868 42 H 0.082 0.918 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.270 -0.945 -0.172 3.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.207 4.207 6 C 0.018 3.982 7 H 0.137 0.863 8 N -0.367 5.367 9 C 0.309 3.691 10 O -0.415 6.415 11 C -0.182 4.182 12 C -0.001 4.001 13 O -0.230 6.230 14 C 0.087 3.913 15 C -0.144 4.144 16 C -0.081 4.081 17 C -0.186 4.186 18 O -0.335 6.335 19 Si 0.592 3.408 20 C -0.174 4.174 21 C -0.091 4.091 22 C -0.220 4.220 23 C -0.182 4.182 24 H 0.062 0.938 25 H 0.106 0.894 26 H 0.062 0.938 27 H 0.113 0.887 28 H 0.095 0.905 29 H 0.240 0.760 30 H 0.126 0.874 31 H 0.126 0.874 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.151 0.849 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.182 1.182 38 H -0.185 1.185 39 H 0.146 0.854 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.101 0.899 43 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.788 -0.414 0.252 2.830 hybrid contribution -0.111 -0.160 -1.312 1.326 sum -2.899 -0.574 -1.059 3.140 Atomic orbital electron populations 1.22837 0.80677 1.03115 1.00169 1.87939 1.20074 1.26818 1.94549 1.23486 0.93751 0.85845 0.96421 0.88921 1.24050 0.97442 1.01443 0.97807 1.22230 0.80425 1.00524 0.94986 0.86316 1.45874 1.14962 1.15355 1.60536 1.20333 0.87379 0.84214 0.77198 1.90746 1.70870 1.24301 1.55613 1.21477 0.93503 0.99814 1.03420 1.22414 0.80826 0.97346 0.99509 1.85979 1.28289 1.36147 1.72592 1.18962 0.92172 0.86693 0.93471 1.20252 0.92071 1.00284 1.01772 1.20057 0.96249 0.93364 0.98420 1.25077 0.87177 1.13027 0.93291 1.86609 1.64860 1.47003 1.34999 0.94840 0.83813 0.75151 0.86995 1.20974 0.95996 0.97058 1.03389 1.20927 0.94103 0.98447 0.95652 1.21399 1.01633 0.93353 1.05656 1.23618 0.95742 1.00396 0.98430 0.93782 0.89416 0.93821 0.88670 0.90519 0.75968 0.87391 0.87366 0.90865 0.90954 0.84852 0.86247 0.77613 1.18246 1.18540 0.85405 0.85180 0.84977 0.89896 0.88388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.38 10.72 -35.23 -0.38 -0.75 16 3 C 0.06 -0.06 4.31 -25.82 -0.11 -0.17 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.17 0.13 7.73 -25.83 -0.20 -0.07 16 6 C 0.12 -0.13 4.21 -67.12 -0.28 -0.41 16 7 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 8 N -0.72 1.20 5.36 -53.02 -0.28 0.92 16 9 C 0.52 0.16 7.83 -10.99 -0.09 0.08 16 10 O -0.54 -2.25 15.60 5.56 0.09 -2.16 16 11 C -0.14 0.24 6.07 -27.88 -0.17 0.07 16 12 C 0.07 0.03 4.03 37.16 0.15 0.18 16 13 O -0.32 -0.64 10.14 -19.44 -0.20 -0.83 16 14 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 15 C -0.13 -0.27 9.62 -39.43 -0.38 -0.65 16 16 C -0.08 -0.08 5.35 -104.65 -0.56 -0.64 16 17 C -0.08 -0.02 2.80 36.00 0.10 0.08 16 18 O -0.53 -0.95 12.83 -35.23 -0.45 -1.40 16 19 Si 0.69 -0.43 29.88 -169.99 -5.08 -5.51 16 20 C -0.16 -0.06 8.67 -39.56 -0.34 -0.40 16 21 C -0.07 -0.04 10.04 -39.61 -0.40 -0.43 16 22 C -0.20 -0.28 9.04 -39.44 -0.36 -0.64 16 23 C -0.14 0.27 7.66 -25.92 -0.20 0.07 16 24 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.41 -1.68 8.71 -40.82 -0.36 -2.04 16 30 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 32 H 0.07 0.05 7.63 -51.93 -0.40 -0.35 16 33 H 0.07 0.05 7.61 -51.93 -0.40 -0.34 16 34 H 0.13 0.27 8.06 -52.49 -0.42 -0.16 16 35 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 36 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 37 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 38 H -0.26 -0.32 7.01 56.52 0.40 0.07 16 39 H 0.13 -0.17 4.84 -52.49 -0.25 -0.42 16 40 H 0.13 -0.20 8.06 -52.48 -0.42 -0.62 16 41 H 0.13 0.06 6.30 -52.49 -0.33 -0.27 16 42 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.10 -0.20 8.11 -51.93 -0.42 -0.62 16 LS Contribution 360.01 15.07 5.43 5.43 Total: 0.00 -7.96 360.01 -9.28 -17.23 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -6.40 Total: -11.08 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -2.00 Total: -1.83 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -0.28 Total: 0.92 kcal Atomic # 8 Polarization: -4.21 SS G_CDS: -0.94 Total: -5.15 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.08 Total: -5.51 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -7.96 -9.28 -17.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.806 kcal (2) G-P(sol) polarization free energy of solvation -7.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.765 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds