Wall clock time and date at job start Mon Mar 8 2021 04:11:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42906 * 114.00108 * 2 1 4 4 H 1.08999 * 112.84453 * 18.80157 * 3 2 1 5 5 C 1.53773 * 113.61375 * 149.99769 * 3 2 1 6 6 C 1.53783 * 87.08265 * 139.97936 * 5 3 2 7 7 H 1.09004 * 113.61409 * 89.19288 * 6 5 3 8 8 N 1.46500 * 113.61798 * 220.01901 * 6 5 3 9 9 C 1.34768 * 120.00015 * 203.46970 * 8 6 5 10 10 O 1.21283 * 120.00373 * 359.97438 * 9 8 6 11 11 C 1.50703 * 120.00287 * 179.97438 * 9 8 6 12 12 C 1.52998 * 109.47564 * 179.97438 * 11 9 8 13 13 C 1.52998 * 109.47242 * 180.02562 * 12 11 9 14 14 O 1.42901 * 109.47046 * 179.97438 * 13 12 11 15 15 C 1.35905 * 116.99604 * 179.97438 * 14 13 12 16 16 C 1.38711 * 120.05327 * 179.97438 * 15 14 13 17 17 C 1.38159 * 119.94573 * 180.02562 * 16 15 14 18 18 C 1.50703 * 119.97368 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47109 * 299.99887 * 18 17 16 20 20 Si 1.86303 * 109.47150 * 180.02562 * 18 17 16 21 21 C 1.38246 * 120.05555 * 0.02562 * 17 16 15 22 22 C 1.38291 * 120.11190 * 0.02562 * 21 17 16 23 23 C 1.38130 * 120.05012 * 359.67962 * 22 21 17 24 24 C 1.53785 * 87.17056 * 334.61225 * 6 5 3 25 25 H 1.09005 * 109.46979 * 60.00034 * 1 2 3 26 26 H 1.08997 * 109.47240 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47349 * 300.00624 * 1 2 3 28 28 H 1.09002 * 113.61601 * 25.43551 * 5 3 2 29 29 H 1.08999 * 113.61775 * 254.52945 * 5 3 2 30 30 H 0.97004 * 119.99762 * 23.47105 * 8 6 5 31 31 H 1.09004 * 109.46598 * 60.00015 * 11 9 8 32 32 H 1.09004 * 109.47086 * 300.00583 * 11 9 8 33 33 H 1.08998 * 109.46945 * 59.99676 * 12 11 9 34 34 H 1.09007 * 109.46896 * 299.99923 * 12 11 9 35 35 H 1.08996 * 109.47090 * 59.99784 * 13 12 11 36 36 H 1.08999 * 109.47084 * 299.99957 * 13 12 11 37 37 H 1.08006 * 120.02510 * 359.97438 * 16 15 14 38 38 H 1.09000 * 109.47298 * 60.00148 * 18 17 16 39 39 H 0.96701 * 114.00329 * 179.97438 * 19 18 17 40 40 H 1.48504 * 109.99654 * 298.67967 * 20 18 17 41 41 H 1.48497 * 110.00004 * 59.99897 * 20 18 17 42 42 H 1.08001 * 119.94258 * 179.97438 * 21 17 16 43 43 H 1.07997 * 119.97183 * 179.97438 * 22 21 17 44 44 H 1.07997 * 120.02288 * 180.32190 * 23 22 21 45 45 H 1.08998 * 113.61616 * 139.94147 * 24 6 5 46 46 H 1.09009 * 113.61154 * 270.84153 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3755 1.3719 0.7045 6 6 3.8228 2.3181 -0.4222 7 1 3.6235 3.3694 -0.2144 8 7 5.1935 2.0785 -0.8803 9 6 5.8843 3.0655 -1.4845 10 8 5.3710 4.1519 -1.6495 11 6 7.2946 2.8193 -1.9553 12 6 7.8460 4.0916 -2.6018 13 6 9.2775 3.8414 -3.0803 14 8 9.7923 5.0296 -3.6846 15 6 11.0622 4.9767 -4.1657 16 6 11.6250 6.0936 -4.7654 17 6 12.9160 6.0372 -5.2541 18 6 13.5283 7.2506 -5.9054 19 8 12.7456 7.6283 -7.0397 20 14 15.2635 6.8519 -6.4539 21 6 13.6467 4.8686 -5.1463 22 6 13.0876 3.7533 -4.5497 23 6 11.7994 3.8065 -4.0541 24 6 2.7533 1.6511 -1.3033 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8899 28 1 3.9088 0.4213 0.7138 29 1 3.3384 1.8471 1.6848 30 1 5.6040 1.2095 -0.7487 31 1 7.2977 2.0102 -2.6858 32 1 7.9185 2.5435 -1.1051 33 1 7.8427 4.9009 -1.8717 34 1 7.2219 4.3668 -3.4521 35 1 9.2803 3.0322 -3.8105 36 1 9.9017 3.5659 -2.2303 37 1 11.0541 7.0065 -4.8510 38 1 13.5528 8.0731 -5.1906 39 1 13.0817 8.4043 -7.5087 40 1 16.0964 6.4879 -5.2795 41 1 15.2433 5.7320 -7.4289 42 1 14.6557 4.8264 -5.5293 43 1 13.6603 2.8414 -4.4671 44 1 11.3650 2.9369 -3.5837 45 1 2.2146 2.3513 -1.9417 46 1 3.1162 0.7769 -1.8440 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549616.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:03 Heat of formation + Delta-G solvation = -99.722344 kcal Electronic energy + Delta-G solvation = -25629.003600 eV Core-core repulsion = 21679.584881 eV Total energy + Delta-G solvation = -3949.418719 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.35394 -41.15741 -39.89251 -39.05816 -37.37621 -37.26027 -34.91864 -34.11554 -32.55935 -31.25053 -28.68369 -27.77113 -26.86191 -26.77698 -25.04274 -23.67934 -23.21277 -21.74965 -21.50973 -20.94915 -18.88099 -18.40011 -18.27702 -18.12065 -17.50393 -17.37096 -16.96883 -16.87440 -16.45207 -16.12407 -16.01317 -15.80100 -15.36303 -15.16289 -14.72414 -14.63236 -14.52711 -14.23954 -13.95650 -13.65657 -13.57561 -13.38263 -13.33937 -13.18264 -12.83974 -12.56447 -12.45663 -12.25436 -12.21034 -12.18625 -12.01147 -11.92427 -11.70316 -11.65110 -10.86298 -10.53920 -10.39096 -10.08482 -9.84008 -9.20693 -4.95905 0.23417 0.43067 1.27647 1.59036 1.65243 1.86160 1.99016 2.29480 2.67156 2.85573 3.33974 3.38577 3.45818 3.56167 3.72169 3.75554 3.79031 3.79735 3.84148 3.90426 3.99297 4.10622 4.18210 4.21331 4.23507 4.27991 4.31333 4.39305 4.40811 4.43145 4.53958 4.62043 4.63197 4.65310 4.71651 4.84631 4.89983 4.95895 4.99863 5.00625 5.15292 5.28454 5.37602 5.44560 5.46950 5.70079 6.16568 6.41755 6.43701 6.63270 7.17838 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.093 0.907 5 C -0.144 4.144 6 C 0.123 3.877 7 H 0.118 0.882 8 N -0.720 5.720 9 C 0.516 3.484 10 O -0.534 6.534 11 C -0.138 4.138 12 C -0.105 4.105 13 C 0.059 3.941 14 O -0.310 6.310 15 C 0.134 3.866 16 C -0.122 4.122 17 C -0.036 4.036 18 C -0.074 4.074 19 O -0.544 6.544 20 Si 0.688 3.312 21 C -0.164 4.164 22 C -0.072 4.072 23 C -0.206 4.206 24 C -0.169 4.169 25 H 0.043 0.957 26 H 0.087 0.913 27 H 0.044 0.956 28 H 0.097 0.903 29 H 0.082 0.918 30 H 0.403 0.597 31 H 0.099 0.901 32 H 0.099 0.901 33 H 0.084 0.916 34 H 0.084 0.916 35 H 0.064 0.936 36 H 0.064 0.936 37 H 0.136 0.864 38 H 0.077 0.923 39 H 0.383 0.617 40 H -0.255 1.255 41 H -0.251 1.251 42 H 0.119 0.881 43 H 0.130 0.870 44 H 0.131 0.869 45 H 0.076 0.924 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.385 -1.664 1.467 2.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.018 3.982 7 H 0.136 0.864 8 N -0.371 5.371 9 C 0.302 3.698 10 O -0.410 6.410 11 C -0.178 4.178 12 C -0.143 4.143 13 C -0.016 4.016 14 O -0.224 6.224 15 C 0.089 3.911 16 C -0.141 4.141 17 C -0.036 4.036 18 C -0.184 4.184 19 O -0.351 6.351 20 Si 0.589 3.411 21 C -0.182 4.182 22 C -0.090 4.090 23 C -0.224 4.224 24 C -0.208 4.208 25 H 0.062 0.938 26 H 0.106 0.894 27 H 0.062 0.938 28 H 0.115 0.885 29 H 0.101 0.899 30 H 0.238 0.762 31 H 0.117 0.883 32 H 0.117 0.883 33 H 0.102 0.898 34 H 0.102 0.898 35 H 0.083 0.917 36 H 0.083 0.917 37 H 0.154 0.846 38 H 0.095 0.905 39 H 0.231 0.769 40 H -0.180 1.180 41 H -0.175 1.175 42 H 0.137 0.863 43 H 0.148 0.852 44 H 0.149 0.851 45 H 0.094 0.906 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 1.257 -2.007 1.508 2.808 hybrid contribution -0.459 -0.720 0.499 0.989 sum 0.798 -2.727 2.007 3.479 Atomic orbital electron populations 1.22835 0.80698 1.03087 1.00175 1.87936 1.20060 1.26869 1.94561 1.23493 0.93761 0.85798 0.96475 0.88935 1.23614 0.95734 1.00370 0.98458 1.22205 0.80666 1.00443 0.94863 0.86389 1.45930 1.14938 1.15386 1.60880 1.20611 0.87876 0.84140 0.77146 1.90748 1.70764 1.24331 1.55200 1.21539 0.93614 1.00080 1.02613 1.21229 0.93186 0.97504 1.02367 1.22836 0.95281 0.86417 0.97095 1.86086 1.26168 1.37585 1.72515 1.18995 0.83978 0.94111 0.94018 1.20244 0.94884 0.98071 1.00864 1.19130 0.93802 0.93730 0.96957 1.24735 1.05693 0.97204 0.90805 1.86501 1.54456 1.51889 1.42217 0.95365 0.76088 0.86881 0.82744 1.20771 0.99806 0.93437 1.04158 1.20852 0.94442 0.97970 0.95720 1.21292 0.96394 0.97935 1.06818 1.24046 0.97514 1.01410 0.97787 0.93824 0.89437 0.93784 0.88472 0.89940 0.76210 0.88318 0.88304 0.89763 0.89758 0.91749 0.91745 0.84585 0.90504 0.76930 1.17988 1.17518 0.86342 0.85240 0.85076 0.90557 0.88751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.50 10.72 -35.23 -0.38 -0.88 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.55 16 5 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 6 C 0.12 -0.06 4.21 -67.11 -0.28 -0.34 16 7 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 8 N -0.72 0.90 5.36 -53.01 -0.28 0.62 16 9 C 0.52 0.44 7.83 -10.99 -0.09 0.36 16 10 O -0.53 -2.86 15.60 5.55 0.09 -2.77 16 11 C -0.14 0.31 5.70 -27.88 -0.16 0.15 16 12 C -0.10 -0.01 4.87 -26.73 -0.13 -0.14 16 13 C 0.06 -0.01 4.74 37.16 0.18 0.17 16 14 O -0.31 -1.04 10.14 -19.44 -0.20 -1.23 16 15 C 0.13 0.48 6.69 -39.22 -0.26 0.22 16 16 C -0.12 -0.49 9.55 -39.44 -0.38 -0.86 16 17 C -0.04 -0.12 5.42 -104.65 -0.57 -0.69 16 18 C -0.07 -0.06 2.81 36.01 0.10 0.04 16 19 O -0.54 -0.58 12.74 -35.23 -0.45 -1.02 16 20 Si 0.69 -0.40 29.79 -169.99 -5.06 -5.46 16 21 C -0.16 -0.51 8.67 -39.56 -0.34 -0.85 16 22 C -0.07 -0.14 10.04 -39.60 -0.40 -0.54 16 23 C -0.21 -0.40 9.04 -39.43 -0.36 -0.76 16 24 C -0.17 0.04 7.73 -25.83 -0.20 -0.16 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.17 8.11 -51.93 -0.42 -0.59 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 30 H 0.40 -1.58 8.71 -40.82 -0.36 -1.93 16 31 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 32 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 33 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 34 H 0.08 0.15 8.10 -51.92 -0.42 -0.27 16 35 H 0.06 -0.09 7.67 -51.93 -0.40 -0.49 16 36 H 0.06 -0.11 7.65 -51.93 -0.40 -0.50 16 37 H 0.14 0.49 8.06 -52.48 -0.42 0.07 16 38 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 39 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 40 H -0.25 -0.44 7.11 56.52 0.40 -0.03 16 41 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 42 H 0.12 0.28 4.87 -52.49 -0.26 0.02 16 43 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 44 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 45 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 46 H 0.09 0.01 8.14 -51.92 -0.42 -0.42 16 LS Contribution 381.52 15.07 5.75 5.75 Total: 0.00 -9.93 381.52 -9.87 -19.80 By element: Atomic # 1 Polarization: -5.09 SS G_CDS: -7.24 Total: -12.33 kcal Atomic # 6 Polarization: -0.37 SS G_CDS: -2.10 Total: -2.47 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.28 Total: 0.62 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -0.94 Total: -5.91 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.06 Total: -5.46 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.93 -9.87 -19.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549616.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.925 kcal (2) G-P(sol) polarization free energy of solvation -9.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.797 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds