Wall clock time and date at job start Mon Mar 8 2021 04:11:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42902 * 113.99939 * 2 1 4 4 H 1.08999 * 112.84751 * 18.80700 * 3 2 1 5 5 C 1.53778 * 113.61186 * 150.00463 * 3 2 1 6 6 C 1.53780 * 87.08242 * 140.07032 * 5 3 2 7 7 H 1.08992 * 113.62213 * 89.19540 * 6 5 3 8 8 N 1.46506 * 113.61223 * 220.02103 * 6 5 3 9 9 C 1.34780 * 119.99658 * 203.46650 * 8 6 5 10 10 O 1.21549 * 119.99822 * 359.97438 * 9 8 6 11 11 C 1.47852 * 119.99666 * 179.97438 * 9 8 6 12 12 C 1.39552 * 120.14319 * 180.25467 * 11 9 8 13 13 C 1.37977 * 119.84962 * 180.24817 * 12 11 9 14 14 C 1.50701 * 119.92405 * 179.78934 * 13 12 11 15 15 O 1.42901 * 109.47504 * 269.72768 * 14 13 12 16 16 C 1.35906 * 117.00155 * 180.02562 * 15 14 13 17 17 C 1.38709 * 120.05198 * 180.02562 * 16 15 14 18 18 C 1.38167 * 119.93745 * 179.97438 * 17 16 15 19 19 C 1.50702 * 119.96727 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47097 * 299.99805 * 19 18 17 21 21 Si 1.86303 * 109.47007 * 180.02562 * 19 18 17 22 22 C 1.38237 * 120.05858 * 0.02562 * 18 17 16 23 23 C 1.38289 * 120.11494 * 359.74537 * 22 18 17 24 24 C 1.38125 * 120.05202 * 0.50894 * 23 22 18 25 25 C 1.38328 * 120.14834 * 359.51849 * 13 12 11 26 26 C 1.38382 * 120.29012 * 0.22787 * 25 13 12 27 27 C 1.37939 * 120.14732 * 0.02562 * 26 25 13 28 28 C 1.53786 * 87.17081 * 334.60460 * 6 5 3 29 29 H 1.08999 * 109.47756 * 59.99577 * 1 2 3 30 30 H 1.09006 * 109.47105 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47214 * 299.99861 * 1 2 3 32 32 H 1.08997 * 113.61951 * 25.51303 * 5 3 2 33 33 H 1.09011 * 113.61035 * 254.60867 * 5 3 2 34 34 H 0.96997 * 120.00125 * 23.46413 * 8 6 5 35 35 H 1.08002 * 120.07654 * 0.02562 * 12 11 9 36 36 H 1.09003 * 109.47211 * 149.72375 * 14 13 12 37 37 H 1.09006 * 109.46922 * 29.72783 * 14 13 12 38 38 H 1.07992 * 120.02910 * 359.95530 * 17 16 15 39 39 H 1.08993 * 109.47086 * 60.00571 * 19 18 17 40 40 H 0.96693 * 114.00499 * 300.00129 * 20 19 18 41 41 H 1.48501 * 110.00122 * 179.97438 * 21 19 18 42 42 H 1.48502 * 109.99930 * 301.32265 * 21 19 18 43 43 H 1.08001 * 119.94627 * 179.97438 * 22 18 17 44 44 H 1.07995 * 119.98087 * 180.27524 * 23 22 18 45 45 H 1.08002 * 120.03152 * 179.77429 * 24 23 22 46 46 H 1.08002 * 119.85631 * 180.25338 * 25 13 12 47 47 H 1.08003 * 119.92678 * 180.02562 * 26 25 13 48 48 H 1.08001 * 120.07095 * 180.02562 * 27 26 25 49 49 H 1.08996 * 113.61549 * 139.94210 * 28 6 5 50 50 H 1.08997 * 113.61837 * 270.84517 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 0.3238 5 6 3.3755 1.3718 0.7044 6 6 3.8219 2.3200 -0.4210 7 1 3.6220 3.3708 -0.2117 8 7 5.1928 2.0820 -0.8796 9 6 5.8828 3.0703 -1.4826 10 8 5.3675 4.1589 -1.6463 11 6 7.2665 2.8303 -1.9450 12 6 7.9856 3.8530 -2.5649 13 6 9.2747 3.6209 -2.9986 14 6 10.0511 4.7227 -3.6726 15 8 9.8272 4.6694 -5.0829 16 6 10.4598 5.6011 -5.8437 17 6 10.2869 5.6079 -7.2200 18 6 10.9307 6.5566 -7.9911 19 6 10.7428 6.5650 -9.4864 20 8 11.1861 5.3196 -10.0291 21 14 11.7370 7.9544 -10.2293 22 6 11.7469 7.4979 -7.3923 23 6 11.9172 7.4962 -6.0199 24 6 11.2800 6.5467 -5.2451 25 6 9.8580 2.3806 -2.8112 26 6 9.1522 1.3638 -2.1924 27 6 7.8609 1.5810 -1.7588 28 6 2.7529 1.6534 -1.3029 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 3.9094 0.4216 0.7124 33 1 3.3381 1.8458 1.6854 34 1 5.6039 1.2131 -0.7493 35 1 7.5328 4.8231 -2.7081 36 1 11.1142 4.5955 -3.4683 37 1 9.7202 5.6877 -3.2884 38 1 9.6499 4.8723 -7.6883 39 1 9.6877 6.7079 -9.7192 40 1 12.1182 5.1262 -9.8598 41 1 11.5608 7.9731 -11.7037 42 1 11.3080 9.2524 -9.6494 43 1 12.2496 8.2383 -7.9969 44 1 12.5518 8.2353 -5.5539 45 1 11.4161 6.5434 -4.1737 46 1 10.8687 2.2053 -3.1489 47 1 9.6135 0.3978 -2.0487 48 1 7.3114 0.7867 -1.2757 49 1 2.2136 2.3541 -1.9403 50 1 3.1162 0.7803 -1.8449 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549630.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:08 Heat of formation + Delta-G solvation = -60.228195 kcal Electronic energy + Delta-G solvation = -31448.557228 eV Core-core repulsion = 26987.946542 eV Total energy + Delta-G solvation = -4460.610686 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -41.61792 -41.24608 -40.41832 -39.43952 -38.78547 -37.26668 -37.21078 -34.55620 -33.23037 -32.43575 -32.17711 -31.01437 -27.99546 -27.72533 -26.84614 -26.60643 -25.95300 -23.97943 -23.63806 -23.18627 -22.14321 -21.39142 -20.97442 -19.19481 -18.83543 -18.27356 -17.78990 -17.31287 -17.21070 -17.18865 -16.91369 -16.81703 -16.38359 -16.26013 -16.10185 -15.81987 -15.61771 -15.53810 -15.17946 -14.98316 -14.88199 -14.67990 -14.42781 -14.13570 -13.99155 -13.65500 -13.56572 -13.47166 -13.36705 -12.92956 -12.87546 -12.78108 -12.55110 -12.28301 -12.20106 -12.18541 -12.00391 -11.90720 -11.89664 -11.62171 -10.94141 -10.52738 -10.49023 -10.20426 -10.09057 -9.97313 -9.88819 -9.21933 -5.01998 -0.29331 0.11561 0.23259 0.43442 1.29393 1.65134 1.70160 1.97509 1.99076 2.27076 2.70122 2.84335 2.85260 3.33719 3.42565 3.47418 3.52032 3.55683 3.65990 3.67848 3.75123 3.79976 3.81592 3.93095 3.98781 4.01046 4.11013 4.18178 4.21871 4.24416 4.38156 4.41696 4.42451 4.43079 4.56367 4.62574 4.63322 4.64586 4.64756 4.72915 4.82306 4.85362 4.91733 4.99407 4.99718 5.13335 5.20311 5.28148 5.32496 5.39034 5.43309 5.46171 5.69152 5.70558 6.17884 6.39414 6.41881 6.58490 7.15370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.143 4.143 6 C 0.124 3.876 7 H 0.120 0.880 8 N -0.714 5.714 9 C 0.562 3.438 10 O -0.533 6.533 11 C -0.139 4.139 12 C -0.034 4.034 13 C -0.105 4.105 14 C 0.102 3.898 15 O -0.307 6.307 16 C 0.131 3.869 17 C -0.125 4.125 18 C -0.081 4.081 19 C -0.070 4.070 20 O -0.539 6.539 21 Si 0.693 3.307 22 C -0.156 4.156 23 C -0.073 4.073 24 C -0.205 4.205 25 C -0.066 4.066 26 C -0.127 4.127 27 C -0.075 4.075 28 C -0.169 4.169 29 H 0.043 0.957 30 H 0.087 0.913 31 H 0.044 0.956 32 H 0.097 0.903 33 H 0.083 0.917 34 H 0.402 0.598 35 H 0.139 0.861 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.134 0.866 39 H 0.115 0.885 40 H 0.379 0.621 41 H -0.255 1.255 42 H -0.258 1.258 43 H 0.128 0.872 44 H 0.130 0.870 45 H 0.130 0.870 46 H 0.132 0.868 47 H 0.135 0.865 48 H 0.129 0.871 49 H 0.077 0.923 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.639 -2.077 3.594 5.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.019 3.981 7 H 0.138 0.862 8 N -0.365 5.365 9 C 0.350 3.650 10 O -0.410 6.410 11 C -0.143 4.143 12 C -0.053 4.053 13 C -0.105 4.105 14 C 0.027 3.973 15 O -0.221 6.221 16 C 0.086 3.914 17 C -0.144 4.144 18 C -0.081 4.081 19 C -0.181 4.181 20 O -0.344 6.344 21 Si 0.595 3.405 22 C -0.174 4.174 23 C -0.091 4.091 24 C -0.224 4.224 25 C -0.085 4.085 26 C -0.145 4.145 27 C -0.093 4.093 28 C -0.208 4.208 29 H 0.062 0.938 30 H 0.106 0.894 31 H 0.062 0.938 32 H 0.115 0.885 33 H 0.102 0.898 34 H 0.238 0.762 35 H 0.157 0.843 36 H 0.094 0.906 37 H 0.093 0.907 38 H 0.152 0.848 39 H 0.133 0.867 40 H 0.227 0.773 41 H -0.180 1.180 42 H -0.183 1.183 43 H 0.146 0.854 44 H 0.148 0.852 45 H 0.148 0.852 46 H 0.150 0.850 47 H 0.153 0.847 48 H 0.147 0.853 49 H 0.095 0.905 50 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.585 -0.895 2.771 3.894 hybrid contribution -0.523 -0.386 0.590 0.878 sum 2.062 -1.282 3.362 4.147 Atomic orbital electron populations 1.22834 0.80700 1.03089 1.00172 1.87935 1.20056 1.26835 1.94551 1.23484 0.93740 0.85819 0.96435 0.88901 1.23619 0.95738 1.00334 0.98463 1.22235 0.80286 1.00594 0.94946 0.86222 1.45813 1.14953 1.15169 1.60594 1.18282 0.85389 0.84100 0.77274 1.90795 1.70306 1.24208 1.55697 1.19876 0.94517 0.95366 1.04492 1.21180 0.92247 0.99170 0.92662 1.19409 0.94875 0.95140 1.01045 1.21595 0.99423 0.97506 0.78764 1.86172 1.66678 1.50761 1.18512 1.19022 0.92400 0.88944 0.91030 1.20256 1.02974 1.01038 0.90084 1.20141 0.96696 0.95285 0.95995 1.25122 1.05353 0.96268 0.91345 1.86512 1.31839 1.37750 1.78290 0.94636 0.89888 0.76347 0.79589 1.20926 1.01114 1.00053 0.95296 1.20915 0.97680 0.97190 0.93284 1.21326 1.02076 0.98303 1.00694 1.21332 1.00188 0.91758 0.95181 1.21142 0.94439 0.99725 0.99227 1.21383 0.95325 0.95555 0.97083 1.24056 0.97443 1.01463 0.97813 0.93828 0.89436 0.93782 0.88451 0.89832 0.76198 0.84343 0.90567 0.90660 0.84831 0.86729 0.77338 1.17979 1.18278 0.85439 0.85170 0.85197 0.85027 0.84695 0.85336 0.90466 0.88690 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.53 10.72 -35.23 -0.38 -0.91 16 3 C 0.06 -0.02 4.31 -25.83 -0.11 -0.13 16 4 H 0.09 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.14 0.18 7.66 -25.92 -0.20 -0.01 16 6 C 0.12 0.00 4.21 -67.11 -0.28 -0.29 16 7 H 0.12 0.13 7.50 -51.93 -0.39 -0.26 16 8 N -0.71 0.03 5.31 -53.95 -0.29 -0.25 16 9 C 0.56 1.56 7.77 -12.32 -0.10 1.47 16 10 O -0.53 -3.45 15.97 5.32 0.08 -3.36 16 11 C -0.14 -0.20 5.87 -104.97 -0.62 -0.81 16 12 C -0.03 -0.06 9.24 -39.19 -0.36 -0.42 16 13 C -0.10 -0.06 5.50 -104.68 -0.58 -0.63 16 14 C 0.10 -0.02 4.86 36.01 0.18 0.16 16 15 O -0.31 -0.76 10.12 -19.44 -0.20 -0.96 16 16 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 17 C -0.12 -0.30 9.55 -39.43 -0.38 -0.67 16 18 C -0.08 -0.08 5.39 -104.65 -0.56 -0.65 16 19 C -0.07 -0.03 2.82 36.01 0.10 0.07 16 20 O -0.54 -0.48 12.77 -35.23 -0.45 -0.93 16 21 Si 0.69 -0.49 29.78 -169.99 -5.06 -5.55 16 22 C -0.16 0.00 8.67 -39.56 -0.34 -0.35 16 23 C -0.07 0.01 10.04 -39.60 -0.40 -0.38 16 24 C -0.21 -0.09 9.04 -39.43 -0.36 -0.45 16 25 C -0.07 0.05 9.69 -39.50 -0.38 -0.33 16 26 C -0.13 0.18 10.03 -39.64 -0.40 -0.22 16 27 C -0.07 0.08 9.54 -39.19 -0.37 -0.30 16 28 C -0.17 -0.02 7.73 -25.82 -0.20 -0.22 16 29 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.10 -0.16 8.11 -51.93 -0.42 -0.58 16 33 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 34 H 0.40 -1.04 6.75 -40.82 -0.28 -1.32 16 35 H 0.14 0.34 7.65 -52.49 -0.40 -0.06 16 36 H 0.08 -0.15 7.60 -51.93 -0.39 -0.55 16 37 H 0.08 -0.08 7.61 -51.93 -0.39 -0.47 16 38 H 0.13 0.37 8.06 -52.49 -0.42 -0.05 16 39 H 0.12 0.12 7.96 -51.93 -0.41 -0.30 16 40 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 41 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 42 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 43 H 0.13 -0.23 4.87 -52.49 -0.26 -0.49 16 44 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 45 H 0.13 -0.19 6.30 -52.49 -0.33 -0.52 16 46 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 47 H 0.14 -0.49 8.06 -52.48 -0.42 -0.91 16 48 H 0.13 -0.48 6.41 -52.49 -0.34 -0.82 16 49 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 50 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 416.76 15.07 6.28 6.28 Total: 0.00 -9.46 416.76 -11.58 -21.04 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.05 Total: -12.27 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -4.52 Total: -3.08 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.29 Total: -0.25 kcal Atomic # 8 Polarization: -5.22 SS G_CDS: -0.94 Total: -6.16 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.06 Total: -5.55 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -9.46 -11.58 -21.04 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549630.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.186 kcal (2) G-P(sol) polarization free energy of solvation -9.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.042 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds