Wall clock time and date at job start Mon Mar 8 2021 04:11:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42898 * 114.00245 * 2 1 4 4 H 1.09004 * 112.84811 * 18.80438 * 3 2 1 5 5 C 1.53774 * 113.61914 * 149.99814 * 3 2 1 6 6 C 1.53785 * 87.08281 * 140.06839 * 5 3 2 7 7 H 1.09005 * 113.61402 * 89.20028 * 6 5 3 8 8 N 1.46495 * 113.61420 * 220.02111 * 6 5 3 9 9 C 1.34777 * 119.99925 * 203.46670 * 8 6 5 10 10 O 1.21695 * 120.00243 * 0.02562 * 9 8 6 11 11 C 1.46659 * 120.00036 * 180.02562 * 9 8 6 12 12 C 1.36544 * 125.99072 * 180.02562 * 11 9 8 13 13 C 1.50706 * 126.64371 * 0.02562 * 12 11 9 14 14 C 1.40363 * 106.71099 * 180.02562 * 12 11 9 15 15 C 1.35134 * 107.11248 * 0.02562 * 14 12 11 16 16 C 1.50705 * 125.61254 * 180.02562 * 15 14 12 17 17 O 1.42900 * 109.47259 * 90.00070 * 16 15 14 18 18 C 1.35899 * 116.99982 * 179.97438 * 17 16 15 19 19 C 1.38729 * 120.05294 * 180.02562 * 18 17 16 20 20 C 1.38146 * 119.94031 * 179.97438 * 19 18 17 21 21 C 1.38263 * 120.05914 * 359.97438 * 20 19 18 22 22 C 1.50697 * 119.94583 * 179.97438 * 21 20 19 23 23 O 1.42895 * 109.47590 * 300.00259 * 22 21 20 24 24 Si 1.86300 * 109.47007 * 179.97438 * 22 21 20 25 25 C 1.38271 * 120.10967 * 0.27730 * 21 20 19 26 26 C 1.38148 * 120.05274 * 359.44682 * 25 21 20 27 27 O 1.33926 * 108.77016 * 0.26303 * 15 14 12 28 28 C 1.53785 * 87.17249 * 334.61100 * 6 5 3 29 29 H 1.09003 * 109.47451 * 299.99832 * 1 2 3 30 30 H 1.08991 * 109.47350 * 60.00311 * 1 2 3 31 31 H 1.09002 * 109.46883 * 180.02562 * 1 2 3 32 32 H 1.09003 * 113.61581 * 25.51963 * 5 3 2 33 33 H 1.08998 * 113.69557 * 254.62402 * 5 3 2 34 34 H 0.97003 * 120.00134 * 23.46793 * 8 6 5 35 35 H 1.08996 * 109.47296 * 270.00273 * 13 12 11 36 36 H 1.09007 * 109.46654 * 29.99905 * 13 12 11 37 37 H 1.09001 * 109.46772 * 149.99705 * 13 12 11 38 38 H 1.08000 * 126.43954 * 179.97438 * 14 12 11 39 39 H 1.09003 * 109.46942 * 329.99584 * 16 15 14 40 40 H 1.08997 * 109.46856 * 210.00259 * 16 15 14 41 41 H 1.07994 * 120.03032 * 359.95651 * 19 18 17 42 42 H 1.07997 * 119.97046 * 180.02562 * 20 19 18 43 43 H 1.09001 * 109.46613 * 60.00397 * 22 21 20 44 44 H 0.96695 * 114.00385 * 180.02562 * 23 22 21 45 45 H 1.48506 * 110.00048 * 60.00676 * 24 22 21 46 46 H 1.48502 * 109.99996 * 181.32001 * 24 22 21 47 47 H 1.07996 * 119.97194 * 179.72944 * 25 21 20 48 48 H 1.07999 * 120.02648 * 180.26899 * 26 25 21 49 49 H 1.08997 * 113.61121 * 139.93662 * 28 6 5 50 50 H 1.08996 * 113.60981 * 270.84589 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3754 1.3719 0.7045 6 6 3.8219 2.3200 -0.4210 7 1 3.6220 3.3709 -0.2117 8 7 5.1928 2.0820 -0.8795 9 6 5.8828 3.0703 -1.4826 10 8 5.3672 4.1605 -1.6458 11 6 7.2550 2.8319 -1.9421 12 6 8.0622 3.7407 -2.5640 13 6 7.7151 5.1670 -2.9050 14 6 9.2779 3.0892 -2.8243 15 6 9.1607 1.8269 -2.3562 16 6 10.2279 0.7647 -2.4200 17 8 11.0354 0.8293 -1.2429 18 6 12.0512 -0.0678 -1.1415 19 6 12.8744 -0.0619 -0.0248 20 6 13.9060 -0.9752 0.0760 21 6 14.1180 -1.8949 -0.9344 22 6 15.2444 -2.8896 -0.8219 23 8 16.4877 -2.1923 -0.7224 24 14 15.2626 -3.9804 -2.3321 25 6 13.3021 -1.8993 -2.0507 26 6 12.2656 -0.9918 -2.1537 27 8 7.9384 1.6739 -1.8309 28 6 2.7529 1.6533 -1.3030 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 3.9095 0.4217 0.7125 33 1 3.3395 1.8455 1.6856 34 1 5.6039 1.2131 -0.7491 35 1 7.2721 5.2053 -3.9002 36 1 7.0027 5.5520 -2.1752 37 1 8.6193 5.7755 -2.8861 38 1 10.1438 3.5162 -3.3084 39 1 10.8521 0.9291 -3.2984 40 1 9.7595 -0.2173 -2.4859 41 1 12.7091 0.6561 0.7647 42 1 14.5469 -0.9714 0.9453 43 1 15.0998 -3.5032 0.0673 44 1 17.2585 -2.7712 -0.6473 45 1 15.4588 -3.1561 -3.5517 46 1 16.3491 -4.9864 -2.2189 47 1 13.4725 -2.6158 -2.8406 48 1 11.6260 -0.9985 -3.0239 49 1 2.2136 2.3541 -1.9403 50 1 3.1164 0.7802 -1.8447 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:12 Heat of formation + Delta-G solvation = -69.653650 kcal Electronic energy + Delta-G solvation = -32540.415776 eV Core-core repulsion = 27888.940320 eV Total energy + Delta-G solvation = -4651.475456 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.86245 -41.31504 -41.13312 -39.70680 -39.17235 -37.38604 -37.32189 -35.30138 -34.16410 -33.17056 -32.05481 -31.61553 -28.86649 -28.51255 -27.70342 -26.83455 -26.21771 -25.11129 -24.01029 -22.72859 -22.38808 -22.09909 -21.32746 -20.57339 -19.48861 -19.09631 -18.55758 -18.27008 -17.71249 -17.38317 -17.02907 -16.86246 -16.79684 -16.52805 -16.22283 -16.08326 -15.76296 -15.50873 -15.42280 -15.12093 -15.05730 -14.56930 -14.47477 -14.24709 -14.11677 -14.00770 -13.89382 -13.69099 -13.56369 -13.50836 -13.49410 -13.36462 -12.86351 -12.74734 -12.50728 -12.25573 -12.20806 -12.16433 -11.94081 -11.91304 -11.73129 -11.11620 -10.73846 -10.52676 -10.52265 -10.19950 -10.03388 -9.62565 -9.22020 -5.00521 -0.15868 0.28168 0.30933 1.02738 1.25370 1.40695 1.55892 1.92341 1.98372 2.10106 2.35149 2.61285 2.85693 3.27143 3.32667 3.36196 3.46768 3.64106 3.66765 3.71701 3.73692 3.78489 3.79970 3.88609 3.93045 3.97328 4.22408 4.25358 4.34144 4.36080 4.40273 4.42686 4.44933 4.49232 4.61993 4.65021 4.65728 4.67837 4.73734 4.81027 4.84767 4.90558 4.94613 4.95803 5.01081 5.14523 5.15365 5.24566 5.33284 5.46528 5.51531 5.67065 5.75639 6.18530 6.25184 6.38243 6.41636 7.01171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.144 4.144 6 C 0.124 3.876 7 H 0.122 0.878 8 N -0.708 5.708 9 C 0.608 3.392 10 O -0.513 6.513 11 C -0.075 4.075 12 C -0.083 4.083 13 C -0.097 4.097 14 C -0.183 4.183 15 C 0.012 3.988 16 C 0.139 3.861 17 O -0.308 6.308 18 C 0.134 3.866 19 C -0.147 4.147 20 C -0.050 4.050 21 C -0.109 4.109 22 C -0.071 4.071 23 O -0.537 6.537 24 Si 0.679 3.321 25 C -0.073 4.073 26 C -0.204 4.204 27 O -0.155 6.155 28 C -0.168 4.168 29 H 0.044 0.956 30 H 0.043 0.957 31 H 0.087 0.913 32 H 0.098 0.902 33 H 0.084 0.916 34 H 0.408 0.592 35 H 0.077 0.923 36 H 0.088 0.912 37 H 0.070 0.930 38 H 0.162 0.838 39 H 0.102 0.898 40 H 0.088 0.912 41 H 0.135 0.865 42 H 0.133 0.867 43 H 0.076 0.924 44 H 0.380 0.620 45 H -0.255 1.255 46 H -0.261 1.261 47 H 0.131 0.869 48 H 0.134 0.866 49 H 0.078 0.922 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.393 -3.947 -0.045 4.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.182 4.182 6 C 0.019 3.981 7 H 0.140 0.860 8 N -0.358 5.358 9 C 0.394 3.606 10 O -0.390 6.390 11 C -0.128 4.128 12 C -0.085 4.085 13 C -0.154 4.154 14 C -0.203 4.203 15 C -0.040 4.040 16 C 0.064 3.936 17 O -0.222 6.222 18 C 0.089 3.911 19 C -0.165 4.165 20 C -0.068 4.068 21 C -0.110 4.110 22 C -0.181 4.181 23 O -0.344 6.344 24 Si 0.580 3.420 25 C -0.090 4.090 26 C -0.222 4.222 27 O -0.052 6.052 28 C -0.207 4.207 29 H 0.062 0.938 30 H 0.062 0.938 31 H 0.106 0.894 32 H 0.116 0.884 33 H 0.103 0.897 34 H 0.243 0.757 35 H 0.096 0.904 36 H 0.107 0.893 37 H 0.089 0.911 38 H 0.179 0.821 39 H 0.120 0.880 40 H 0.106 0.894 41 H 0.153 0.847 42 H 0.151 0.849 43 H 0.094 0.906 44 H 0.227 0.773 45 H -0.180 1.180 46 H -0.186 1.186 47 H 0.148 0.852 48 H 0.152 0.848 49 H 0.097 0.903 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.803 -3.207 -0.624 3.731 hybrid contribution 1.244 -0.100 0.265 1.276 sum -0.559 -3.307 -0.359 3.373 Atomic orbital electron populations 1.22834 0.80699 1.03096 1.00167 1.87940 1.20050 1.26804 1.94538 1.23473 0.93734 0.85859 0.96360 0.88838 1.23623 0.95705 1.00400 0.98438 1.22296 0.79890 1.00769 0.95158 0.85999 1.45811 1.15028 1.15124 1.59851 1.16503 0.81952 0.84470 0.77626 1.90873 1.67828 1.23666 1.56625 1.21851 0.95051 0.85140 1.10713 1.20687 0.92562 0.97720 0.97573 1.20478 1.02604 0.89204 1.03093 1.21612 0.99641 0.92965 1.06048 1.21907 0.84770 0.96624 1.00650 1.20950 0.88210 0.96243 0.88166 1.86148 1.41142 1.53560 1.41327 1.18969 0.88197 0.89144 0.94758 1.20499 0.96292 1.02038 0.97686 1.20826 0.95151 0.92506 0.98337 1.19176 0.96963 0.99130 0.95692 1.24726 0.84346 0.98749 1.10277 1.86588 1.15421 1.36574 1.95817 0.95173 0.89807 0.79850 0.77157 1.20733 0.94405 0.97502 0.96376 1.21158 1.02081 0.98863 1.00141 1.83975 1.23463 1.34607 1.63118 1.24056 0.97325 1.01492 0.97841 0.93778 0.93821 0.89441 0.88361 0.89737 0.75672 0.90440 0.89322 0.91063 0.82081 0.88031 0.89441 0.84738 0.84908 0.90590 0.77256 1.18004 1.18641 0.85193 0.84835 0.90346 0.88645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.51 10.72 -35.23 -0.38 -0.88 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.14 0.16 7.66 -25.92 -0.20 -0.04 16 6 C 0.12 -0.02 4.21 -67.12 -0.28 -0.30 16 7 H 0.12 0.06 7.50 -51.93 -0.39 -0.33 16 8 N -0.71 -0.41 5.36 -54.33 -0.29 -0.70 16 9 C 0.61 1.87 7.79 -12.86 -0.10 1.77 16 10 O -0.51 -2.77 14.36 5.19 0.07 -2.70 16 11 C -0.08 -0.22 7.13 -36.80 -0.26 -0.48 16 12 C -0.08 -0.20 6.20 -104.43 -0.65 -0.85 16 13 C -0.10 -0.14 9.82 36.01 0.35 0.21 16 14 C -0.18 -0.19 10.73 -39.89 -0.43 -0.62 16 15 C 0.01 0.01 6.94 -35.41 -0.25 -0.23 16 16 C 0.14 -0.16 5.27 36.01 0.19 0.03 16 17 O -0.31 -0.44 10.12 -19.42 -0.20 -0.64 16 18 C 0.13 0.16 6.69 -39.22 -0.26 -0.10 16 19 C -0.15 -0.20 9.99 -39.43 -0.39 -0.59 16 20 C -0.05 -0.06 9.60 -39.61 -0.38 -0.44 16 21 C -0.11 -0.10 5.42 -104.60 -0.57 -0.67 16 22 C -0.07 0.02 2.81 36.00 0.10 0.12 16 23 O -0.54 -0.54 12.74 -35.23 -0.45 -0.99 16 24 Si 0.68 -0.78 29.78 -169.99 -5.06 -5.84 16 25 C -0.07 0.00 8.66 -39.60 -0.34 -0.35 16 26 C -0.20 0.05 9.04 -39.43 -0.36 -0.31 16 27 O -0.16 -0.32 10.40 4.98 0.05 -0.26 16 28 C -0.17 0.03 7.73 -25.82 -0.20 -0.17 16 29 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.10 -0.11 8.11 -51.93 -0.42 -0.53 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.41 -0.39 8.47 -40.82 -0.35 -0.73 16 35 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.09 0.25 6.45 -51.93 -0.33 -0.08 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.16 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.10 -0.34 7.66 -51.93 -0.40 -0.73 16 40 H 0.09 -0.24 7.66 -51.93 -0.40 -0.64 16 41 H 0.13 0.06 8.06 -52.49 -0.42 -0.36 16 42 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 43 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 45 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 46 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 47 H 0.13 -0.25 4.87 -52.49 -0.26 -0.50 16 48 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 49 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 50 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 419.43 15.07 6.32 6.32 Total: 0.00 -8.81 419.43 -10.11 -18.92 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -7.15 Total: -11.16 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -3.04 Total: -2.07 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.29 Total: -0.70 kcal Atomic # 8 Polarization: -4.58 SS G_CDS: -0.90 Total: -5.47 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.06 Total: -5.84 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -8.81 -10.11 -18.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.729 kcal (2) G-P(sol) polarization free energy of solvation -8.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds