Wall clock time and date at job start Mon Mar 8 2021 04:11:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42896 * 114.00352 * 2 1 4 4 H 1.08999 * 112.84975 * 18.79986 * 3 2 1 5 5 C 1.53777 * 113.61992 * 149.99859 * 3 2 1 6 6 C 1.53776 * 87.08340 * 140.06140 * 5 3 2 7 7 H 1.09000 * 113.61308 * 89.20123 * 6 5 3 8 8 N 1.46499 * 113.61726 * 220.01951 * 6 5 3 9 9 C 1.34784 * 119.99971 * 205.00181 * 8 6 5 10 10 O 1.21605 * 119.99806 * 359.72704 * 9 8 6 11 11 C 1.47377 * 119.99549 * 179.97438 * 9 8 6 12 12 C 1.36423 * 127.18543 * 179.70900 * 11 9 8 13 13 C 1.50695 * 125.80322 * 359.97438 * 12 11 9 14 14 O 1.42901 * 109.47102 * 90.00009 * 13 12 11 15 15 C 1.35903 * 117.00234 * 179.97438 * 14 13 12 16 16 C 1.38733 * 120.05294 * 359.72687 * 15 14 13 17 17 C 1.38142 * 119.93777 * 179.73855 * 16 15 14 18 18 C 1.38265 * 120.05981 * 0.51815 * 17 16 15 19 19 C 1.50697 * 119.94479 * 179.74508 * 18 17 16 20 20 O 1.42907 * 109.47003 * 245.01710 * 19 18 17 21 21 Si 1.86304 * 109.47324 * 5.01316 * 19 18 17 22 22 C 1.38264 * 120.10979 * 359.75679 * 18 17 16 23 23 C 1.38139 * 120.05533 * 359.97438 * 22 18 17 24 24 O 1.33654 * 108.39294 * 179.83916 * 12 11 9 25 25 C 1.34219 * 110.90739 * 0.44893 * 24 12 11 26 26 C 1.34175 * 109.12818 * 359.72508 * 25 24 12 27 27 C 1.53780 * 113.68862 * 247.53788 * 3 2 1 28 28 H 1.08997 * 109.47129 * 300.00302 * 1 2 3 29 29 H 1.08999 * 109.47105 * 60.00388 * 1 2 3 30 30 H 1.09003 * 109.47392 * 180.02562 * 1 2 3 31 31 H 1.09000 * 113.61068 * 25.51552 * 5 3 2 32 32 H 1.08998 * 113.61780 * 254.61528 * 5 3 2 33 33 H 0.96999 * 119.99984 * 25.00028 * 8 6 5 34 34 H 1.08996 * 109.47287 * 209.99618 * 13 12 11 35 35 H 1.08996 * 109.47364 * 330.00202 * 13 12 11 36 36 H 1.07994 * 120.02839 * 359.97438 * 16 15 14 37 37 H 1.08002 * 119.96855 * 180.22896 * 17 16 15 38 38 H 1.09001 * 109.47474 * 125.01672 * 19 18 17 39 39 H 0.96703 * 113.99822 * 59.99282 * 20 19 18 40 40 H 1.48496 * 109.99869 * 58.68433 * 21 19 18 41 41 H 1.48499 * 110.00042 * 180.02562 * 21 19 18 42 42 H 1.08004 * 119.97053 * 179.97438 * 22 18 17 43 43 H 1.08011 * 120.02748 * 179.97438 * 23 22 18 44 44 H 1.08001 * 125.43455 * 179.76581 * 25 24 12 45 45 H 1.07997 * 127.02910 * 180.02562 * 26 25 24 46 46 H 1.08997 * 113.62151 * 105.46081 * 27 3 2 47 47 H 1.09000 * 113.61579 * 334.54971 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3756 1.3719 0.7045 6 6 3.8221 2.3197 -0.4211 7 1 3.6222 3.3706 -0.2118 8 7 5.1930 2.0817 -0.8796 9 6 5.8939 3.0789 -1.4548 10 8 5.3866 4.1748 -1.5978 11 6 7.2732 2.8395 -1.9155 12 6 8.1084 3.7344 -2.5178 13 6 7.7799 5.1700 -2.8371 14 8 8.1436 5.9992 -1.7316 15 6 7.9122 7.3324 -1.8579 16 6 7.3519 7.8329 -3.0241 17 6 7.1127 9.1878 -3.1478 18 6 7.4411 10.0462 -2.1148 19 6 7.1843 11.5245 -2.2547 20 8 8.4292 12.2263 -2.2554 21 14 6.2870 11.8503 -3.8547 22 6 8.0049 9.5505 -0.9537 23 6 8.2410 8.1958 -0.8229 24 8 9.2686 3.1222 -2.7736 25 6 9.2340 1.8424 -2.3707 26 6 8.0343 1.5846 -1.8281 27 6 2.7531 1.6509 -1.3014 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 3.9094 0.4216 0.7125 32 1 3.3382 1.8458 1.6854 33 1 5.5962 1.2064 -0.7691 34 1 8.3341 5.4812 -3.7225 35 1 6.7105 5.2647 -3.0259 36 1 7.0994 7.1634 -3.8330 37 1 6.6730 9.5776 -4.0540 38 1 6.5740 11.8681 -1.4195 39 1 9.0244 11.9707 -2.9735 40 1 5.0053 11.1009 -3.8799 41 1 6.0284 13.3049 -4.0049 42 1 8.2609 10.2231 -0.1484 43 1 8.6819 7.8090 0.0841 44 1 10.0430 1.1335 -2.4672 45 1 7.6967 0.6471 -1.4117 46 1 2.2134 2.3502 -1.9399 47 1 3.1169 0.7770 -1.8418 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:17 Heat of formation + Delta-G solvation = -66.705370 kcal Electronic energy + Delta-G solvation = -31266.249583 eV Core-core repulsion = 26770.439593 eV Total energy + Delta-G solvation = -4495.809990 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.74565 -41.21221 -41.12763 -39.68222 -39.11458 -37.29120 -37.09926 -34.57571 -33.63318 -32.78353 -31.91907 -31.32503 -28.20214 -27.72705 -26.84181 -26.17176 -25.62654 -23.92203 -23.69339 -22.35826 -22.06413 -21.43917 -20.60846 -19.40251 -19.13086 -18.24719 -18.19135 -17.37898 -17.21617 -16.95366 -16.81608 -16.73519 -16.41132 -16.24432 -16.12441 -15.83524 -15.67068 -15.52683 -15.28985 -15.01288 -14.61706 -14.50028 -14.22974 -14.15930 -13.92536 -13.64930 -13.57493 -13.50894 -13.40018 -13.08153 -12.83618 -12.24344 -12.21022 -12.13822 -12.00523 -11.97789 -11.91045 -11.68743 -10.98315 -10.97154 -10.53598 -10.35716 -10.11373 -9.96338 -9.86524 -9.12658 -4.99937 0.02627 0.37457 0.39005 0.91944 1.35296 1.48363 1.68260 2.02077 2.04841 2.15864 2.51992 2.74492 2.85444 3.28551 3.35579 3.46967 3.54309 3.60088 3.66288 3.73368 3.75162 3.79853 3.84020 3.92883 3.97095 4.14652 4.22772 4.31730 4.34924 4.39460 4.41139 4.51295 4.53542 4.56229 4.63813 4.64176 4.72205 4.72955 4.73928 4.85518 4.89837 5.00956 5.02159 5.09334 5.23304 5.34211 5.44374 5.57079 5.76461 5.84155 6.17129 6.36466 6.43870 6.63742 7.15910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.144 4.144 6 C 0.125 3.875 7 H 0.121 0.879 8 N -0.709 5.709 9 C 0.591 3.409 10 O -0.534 6.534 11 C -0.211 4.211 12 C 0.065 3.935 13 C 0.136 3.864 14 O -0.304 6.304 15 C 0.143 3.857 16 C -0.202 4.202 17 C -0.073 4.073 18 C -0.159 4.159 19 C -0.062 4.062 20 O -0.541 6.541 21 Si 0.683 3.317 22 C -0.052 4.052 23 C -0.148 4.148 24 O -0.165 6.165 25 C -0.014 4.014 26 C -0.196 4.196 27 C -0.168 4.168 28 H 0.043 0.957 29 H 0.043 0.957 30 H 0.087 0.913 31 H 0.097 0.903 32 H 0.083 0.917 33 H 0.403 0.597 34 H 0.084 0.916 35 H 0.116 0.884 36 H 0.132 0.868 37 H 0.129 0.871 38 H 0.112 0.888 39 H 0.378 0.622 40 H -0.258 1.258 41 H -0.255 1.255 42 H 0.133 0.867 43 H 0.133 0.867 44 H 0.215 0.785 45 H 0.162 0.838 46 H 0.076 0.924 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.522 -4.693 -2.012 5.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.182 4.182 6 C 0.020 3.980 7 H 0.138 0.862 8 N -0.359 5.359 9 C 0.379 3.621 10 O -0.412 6.412 11 C -0.216 4.216 12 C 0.012 3.988 13 C 0.061 3.939 14 O -0.217 6.217 15 C 0.097 3.903 16 C -0.221 4.221 17 C -0.091 4.091 18 C -0.160 4.160 19 C -0.173 4.173 20 O -0.347 6.347 21 Si 0.586 3.414 22 C -0.070 4.070 23 C -0.167 4.167 24 O -0.060 6.060 25 C -0.081 4.081 26 C -0.215 4.215 27 C -0.207 4.207 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.106 0.894 31 H 0.115 0.885 32 H 0.101 0.899 33 H 0.238 0.762 34 H 0.102 0.898 35 H 0.133 0.867 36 H 0.150 0.850 37 H 0.147 0.853 38 H 0.129 0.871 39 H 0.226 0.774 40 H -0.183 1.183 41 H -0.180 1.180 42 H 0.151 0.849 43 H 0.151 0.849 44 H 0.231 0.769 45 H 0.179 0.821 46 H 0.095 0.905 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.411 -3.452 -1.944 3.982 hybrid contribution -0.211 -0.854 0.611 1.071 sum -0.622 -4.306 -1.333 4.550 Atomic orbital electron populations 1.22832 0.80715 1.03081 1.00162 1.87936 1.20037 1.26844 1.94558 1.23446 0.93749 0.85817 0.96455 0.88915 1.23629 0.95696 1.00380 0.98525 1.22230 0.80194 1.00631 0.94916 0.86155 1.45665 1.14684 1.14083 1.61515 1.17214 0.83797 0.84082 0.77018 1.90793 1.70655 1.23715 1.56000 1.21218 0.96596 0.95096 1.08648 1.21950 0.83574 0.93991 0.99302 1.21110 1.02587 0.81424 0.88777 1.86090 1.79500 1.15307 1.40852 1.18956 0.94912 0.82149 0.94246 1.21183 1.06040 0.96653 0.98192 1.20753 0.97909 0.92791 0.97636 1.20216 1.04133 0.96008 0.95599 1.24962 0.91905 0.89206 1.11258 1.86501 1.28179 1.64241 1.55753 0.94854 0.82560 0.80858 0.83176 1.20821 0.95332 0.93847 0.96968 1.20492 1.05133 0.92294 0.98787 1.83801 1.34251 1.23541 1.64388 1.24066 1.00166 0.83243 1.00611 1.22900 0.94292 0.98423 1.05888 1.24021 0.97425 1.01436 0.97817 0.93791 0.93838 0.89441 0.88453 0.89871 0.76166 0.89774 0.86671 0.84996 0.85335 0.87058 0.77429 1.18268 1.18024 0.84917 0.84904 0.76885 0.82055 0.90513 0.88692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.49 10.72 -35.23 -0.38 -0.87 16 3 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.55 16 5 C -0.14 0.17 7.66 -25.92 -0.20 -0.03 16 6 C 0.13 -0.01 4.24 -67.12 -0.28 -0.30 16 7 H 0.12 0.13 7.47 -51.93 -0.39 -0.25 16 8 N -0.71 -0.02 5.35 -54.11 -0.29 -0.31 16 9 C 0.59 1.62 7.81 -12.54 -0.10 1.52 16 10 O -0.53 -3.02 14.45 5.27 0.08 -2.94 16 11 C -0.21 -0.36 6.31 -103.27 -0.65 -1.02 16 12 C 0.06 0.14 7.00 -34.96 -0.24 -0.11 16 13 C 0.14 0.22 4.74 36.00 0.17 0.39 16 14 O -0.30 -1.12 10.12 -19.44 -0.20 -1.32 16 15 C 0.14 0.42 6.69 -39.22 -0.26 0.16 16 16 C -0.20 -0.28 9.04 -39.43 -0.36 -0.64 16 17 C -0.07 -0.05 8.66 -39.61 -0.34 -0.39 16 18 C -0.16 -0.20 5.35 -104.60 -0.56 -0.76 16 19 C -0.06 -0.04 2.80 36.00 0.10 0.06 16 20 O -0.54 -0.51 12.83 -35.23 -0.45 -0.96 16 21 Si 0.68 -0.20 29.80 -169.99 -5.07 -5.26 16 22 C -0.05 -0.09 9.68 -39.61 -0.38 -0.48 16 23 C -0.15 -0.38 9.99 -39.44 -0.39 -0.77 16 24 O -0.16 -0.20 10.52 7.64 0.08 -0.12 16 25 C -0.01 0.02 12.03 29.30 0.35 0.37 16 26 C -0.20 0.22 10.60 -37.45 -0.40 -0.18 16 27 C -0.17 0.04 7.71 -25.92 -0.20 -0.16 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.10 -0.14 8.12 -51.93 -0.42 -0.56 16 32 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.40 -0.92 7.90 -40.82 -0.32 -1.25 16 34 H 0.08 -0.06 7.65 -51.93 -0.40 -0.46 16 35 H 0.12 0.22 6.02 -51.93 -0.31 -0.09 16 36 H 0.13 -0.08 6.30 -52.49 -0.33 -0.41 16 37 H 0.13 -0.19 4.90 -52.49 -0.26 -0.45 16 38 H 0.11 0.12 7.96 -51.93 -0.41 -0.30 16 39 H 0.38 -1.10 8.70 45.56 0.40 -0.70 16 40 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 41 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 42 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 43 H 0.13 0.23 8.06 -52.48 -0.42 -0.20 16 44 H 0.21 -1.15 8.06 -52.49 -0.42 -1.57 16 45 H 0.16 -0.65 7.74 -52.49 -0.41 -1.05 16 46 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 47 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 397.12 15.07 5.98 5.98 Total: 0.00 -9.54 397.12 -9.27 -18.80 By element: Atomic # 1 Polarization: -5.34 SS G_CDS: -6.26 Total: -11.61 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -2.77 Total: -1.39 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: -0.29 Total: -0.31 kcal Atomic # 8 Polarization: -5.35 SS G_CDS: -0.87 Total: -6.22 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.07 Total: -5.26 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -9.54 -9.27 -18.80 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.901 kcal (2) G-P(sol) polarization free energy of solvation -9.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds