Wall clock time and date at job start Mon Mar 8 2021 04:11:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35996 * 117.00041 * 2 1 4 4 C 1.39151 * 120.07217 * 179.97438 * 3 2 1 5 5 O 1.35995 * 120.07763 * 0.02562 * 4 3 2 6 6 C 1.42891 * 117.00188 * 179.72322 * 5 4 3 7 7 C 1.50706 * 109.47345 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99401 * 359.97438 * 7 6 5 9 9 N 1.34770 * 120.00125 * 180.02562 * 7 6 5 10 10 C 1.46497 * 119.99944 * 179.97438 * 9 7 6 11 11 H 1.09005 * 112.85153 * 23.79532 * 10 9 7 12 12 C 1.53783 * 113.61915 * 154.99988 * 10 9 7 13 13 C 1.53781 * 87.08483 * 139.97848 * 12 10 9 14 14 H 1.08999 * 113.61080 * 89.19754 * 13 12 10 15 15 O 1.42892 * 113.61527 * 220.02012 * 13 12 10 16 16 C 1.42900 * 114.00093 * 210.00409 * 15 13 12 17 17 C 1.53783 * 87.08086 * 334.56903 * 13 12 10 18 18 C 1.38570 * 119.85250 * 179.72809 * 4 3 2 19 19 C 1.38247 * 119.99930 * 0.25054 * 18 4 3 20 20 N 1.48001 * 119.92855 * 180.02562 * 19 18 4 21 21 O 1.21798 * 119.99728 * 359.97438 * 20 19 18 22 22 O 1.21803 * 120.00199 * 180.02562 * 20 19 18 23 23 C 1.38255 * 120.14346 * 0.02562 * 19 18 4 24 24 C 1.50701 * 119.92495 * 179.97438 * 23 19 18 25 25 O 1.42902 * 109.47213 * 74.99600 * 24 23 19 26 26 Si 1.86298 * 109.47114 * 194.99764 * 24 23 19 27 27 C 1.38245 * 120.14805 * 359.97298 * 23 19 18 28 28 H 1.09006 * 109.47100 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47497 * 300.00088 * 1 2 3 30 30 H 1.08993 * 109.47259 * 60.00814 * 1 2 3 31 31 H 1.09002 * 109.47220 * 299.99841 * 6 5 4 32 32 H 1.08996 * 109.47672 * 59.99785 * 6 5 4 33 33 H 0.97000 * 120.00241 * 359.97438 * 9 7 6 34 34 H 1.08996 * 113.61194 * 254.53320 * 12 10 9 35 35 H 1.08996 * 113.60808 * 25.34469 * 12 10 9 36 36 H 1.08996 * 109.47010 * 299.99650 * 16 15 13 37 37 H 1.08999 * 109.47454 * 59.99577 * 16 15 13 38 38 H 1.09005 * 109.47280 * 179.97438 * 16 15 13 39 39 H 1.09003 * 113.61230 * 270.88212 * 17 13 12 40 40 H 1.08998 * 113.61526 * 139.97764 * 17 13 12 41 41 H 1.08001 * 120.00237 * 180.23265 * 18 4 3 42 42 H 1.08999 * 109.47099 * 314.99991 * 24 23 19 43 43 H 0.96698 * 113.99839 * 60.00053 * 25 24 23 44 44 H 1.48499 * 109.99923 * 58.68227 * 26 24 23 45 45 H 1.48504 * 110.00182 * 179.97438 * 26 24 23 46 46 H 1.08005 * 119.99641 * 180.02562 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6002 0.3007 -0.0050 7 6 6.2519 -1.0582 -0.0048 8 8 5.5670 -2.0591 0.0002 9 7 7.5957 -1.1611 -0.0091 10 6 8.2291 -2.4821 -0.0083 11 1 7.5820 -3.2621 -0.4097 12 6 9.6449 -2.4868 -0.6085 13 6 10.0338 -3.4600 0.5169 14 1 9.8819 -4.5082 0.2595 15 8 11.3259 -3.2064 1.0719 16 6 11.9842 -4.3733 1.5689 17 6 8.8821 -2.8513 1.3342 18 6 4.0603 2.5233 -0.0052 19 6 3.3029 3.6799 -0.0061 20 7 3.9714 5.0003 -0.0128 21 8 5.1875 5.0671 -0.0170 22 8 3.3054 6.0201 -0.0132 23 6 1.9223 3.6057 -0.0009 24 6 1.1015 4.8696 -0.0014 25 8 1.1298 5.4555 -1.3045 26 14 -0.6579 4.4676 0.4607 27 6 1.2932 2.3747 0.0048 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 5.9032 0.8483 -0.8975 32 1 5.9098 0.8526 0.8824 33 1 8.1434 -0.3606 -0.0127 34 1 9.6956 -2.9277 -1.6040 35 1 10.1485 -1.5221 -0.5467 36 1 11.3793 -4.8245 2.3554 37 1 12.1174 -5.0888 0.7575 38 1 12.9583 -4.0968 1.9726 39 1 9.1778 -1.9866 1.9284 40 1 8.3170 -3.5866 1.9070 41 1 5.1386 2.5840 -0.0086 42 1 1.5157 5.5721 0.7218 43 1 0.7754 4.8848 -2.0001 44 1 -0.6978 3.8287 1.8006 45 1 -1.4777 5.7059 0.4644 46 1 0.2145 2.3196 0.0084 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549636.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:22 Heat of formation + Delta-G solvation = -106.211545 kcal Electronic energy + Delta-G solvation = -33588.925021 eV Core-core repulsion = 28645.063901 eV Total energy + Delta-G solvation = -4943.861121 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.144 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.23844 -42.12821 -41.38040 -40.32524 -39.47456 -39.16343 -37.58794 -37.29859 -37.06175 -34.40160 -32.70890 -32.56207 -30.06139 -29.01088 -27.89334 -27.83174 -26.89828 -25.93091 -24.97835 -23.79963 -23.17176 -21.85478 -21.19150 -20.72424 -19.68880 -19.56724 -18.74293 -18.53025 -18.47154 -18.09880 -17.83417 -17.69067 -17.38768 -17.02794 -16.89198 -16.49655 -16.29984 -16.21110 -16.12066 -15.63067 -15.47517 -15.16409 -15.04924 -14.71416 -14.41381 -14.11364 -13.96016 -13.63092 -13.55280 -13.51821 -13.15076 -12.88973 -12.73381 -12.59232 -12.53283 -12.31561 -12.27863 -12.24968 -12.20290 -11.97114 -11.94218 -11.67354 -11.01519 -10.58684 -10.57553 -10.53497 -10.23291 -9.54061 -5.27852 -1.22863 -0.51626 0.31797 0.43085 1.02627 1.12252 1.34417 1.43941 1.70810 1.82430 1.86106 2.19149 2.79467 2.90087 3.08437 3.19400 3.26814 3.33993 3.39047 3.45111 3.45387 3.63896 3.64621 3.72910 3.74617 3.79502 3.85030 3.93814 3.97070 4.15816 4.17649 4.24368 4.36162 4.37709 4.38959 4.53994 4.57018 4.58882 4.66324 4.69696 4.78870 4.84143 4.90258 5.28180 5.44075 5.47448 5.91387 6.13218 6.23316 6.43739 6.78291 6.96562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.109 3.891 5 O -0.265 6.265 6 C 0.031 3.969 7 C 0.520 3.480 8 O -0.509 6.509 9 N -0.713 5.713 10 C 0.126 3.874 11 H 0.122 0.878 12 C -0.144 4.144 13 C 0.064 3.936 14 H 0.094 0.906 15 O -0.375 6.375 16 C 0.028 3.972 17 C -0.169 4.169 18 C -0.118 4.118 19 C -0.025 4.025 20 N 0.032 4.968 21 O -0.173 6.173 22 O -0.130 6.130 23 C -0.043 4.043 24 C -0.074 4.074 25 O -0.515 6.515 26 Si 0.675 3.325 27 C -0.177 4.177 28 H 0.114 0.886 29 H 0.064 0.936 30 H 0.068 0.932 31 H 0.101 0.899 32 H 0.100 0.900 33 H 0.405 0.595 34 H 0.083 0.917 35 H 0.098 0.902 36 H 0.043 0.957 37 H 0.044 0.956 38 H 0.087 0.913 39 H 0.096 0.904 40 H 0.077 0.923 41 H 0.166 0.834 42 H 0.139 0.861 43 H 0.374 0.626 44 H -0.252 1.252 45 H -0.242 1.242 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.242 -4.896 -1.306 5.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.196 6.196 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.304 3.696 8 O -0.382 6.382 9 N -0.367 5.367 10 C 0.021 3.979 11 H 0.139 0.861 12 C -0.182 4.182 13 C 0.005 3.995 14 H 0.112 0.888 15 O -0.293 6.293 16 C -0.068 4.068 17 C -0.208 4.208 18 C -0.138 4.138 19 C -0.109 4.109 20 N 0.551 4.449 21 O -0.384 6.384 22 O -0.350 6.350 23 C -0.045 4.045 24 C -0.184 4.184 25 O -0.319 6.319 26 Si 0.574 3.426 27 C -0.196 4.196 28 H 0.132 0.868 29 H 0.083 0.917 30 H 0.086 0.914 31 H 0.119 0.881 32 H 0.118 0.882 33 H 0.241 0.759 34 H 0.102 0.898 35 H 0.117 0.883 36 H 0.062 0.938 37 H 0.062 0.938 38 H 0.106 0.894 39 H 0.114 0.886 40 H 0.096 0.904 41 H 0.184 0.816 42 H 0.156 0.844 43 H 0.220 0.780 44 H -0.177 1.177 45 H -0.166 1.166 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.344 -5.890 -0.390 6.351 hybrid contribution 1.052 0.888 0.278 1.404 sum -1.292 -5.002 -0.112 5.168 Atomic orbital electron populations 1.23417 0.76809 1.05774 1.02173 1.86345 1.22483 1.24221 1.86507 1.18444 0.89035 0.85895 0.94418 1.17851 0.88421 0.85330 1.02200 1.86332 1.16851 1.26030 1.88417 1.22670 0.80208 0.97222 1.04682 1.19875 0.82675 0.90165 0.76863 1.90801 1.62605 1.37845 1.46959 1.45717 1.05713 1.09487 1.75775 1.22266 0.92818 0.85542 0.97260 0.86061 1.23635 0.94257 1.01441 0.98850 1.23438 0.83034 0.98697 0.94301 0.88845 1.87939 1.30274 1.32367 1.78764 1.22839 0.97728 0.88138 0.98097 1.24035 0.96816 1.02332 0.97610 1.20811 1.02218 0.88973 1.01787 1.20401 0.91978 0.83147 1.15374 1.43382 1.00991 1.02617 0.97926 1.94542 0.95783 1.93720 1.54353 1.94576 1.64446 1.24070 1.51878 1.20100 0.91602 0.97054 0.95751 1.25470 1.08467 0.93292 0.91189 1.86713 1.86522 1.43420 1.15228 0.95580 0.76373 0.85249 0.85349 1.20900 1.00499 0.89594 1.08559 0.86781 0.91739 0.91364 0.88127 0.88200 0.75939 0.89787 0.88307 0.93818 0.93758 0.89404 0.88590 0.90433 0.81618 0.84409 0.77981 1.17650 1.16591 0.82017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.04 10.28 -34.23 -0.35 -0.40 16 3 C 0.17 -0.03 6.70 -39.12 -0.26 -0.29 16 4 C 0.11 0.06 6.70 -39.12 -0.26 -0.21 16 5 O -0.26 -0.43 9.45 -47.35 -0.45 -0.88 16 6 C 0.03 -0.05 5.22 36.01 0.19 0.13 16 7 C 0.52 0.32 7.91 -10.99 -0.09 0.23 16 8 O -0.51 -2.75 16.10 -14.35 -0.23 -2.98 16 9 N -0.71 1.47 5.35 -53.01 -0.28 1.19 16 10 C 0.13 -0.17 4.24 -67.12 -0.28 -0.45 16 11 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 12 C -0.14 0.32 7.66 -25.92 -0.20 0.12 16 13 C 0.06 -0.07 4.31 -25.92 -0.11 -0.19 16 14 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 15 O -0.38 -0.29 10.71 -35.23 -0.38 -0.67 16 16 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 17 C -0.17 0.18 7.71 -25.91 -0.20 -0.02 16 18 C -0.12 0.00 8.54 -39.46 -0.34 -0.33 16 19 C -0.03 -0.04 6.85 -79.95 -0.55 -0.59 16 20 N 0.03 0.14 4.45 33.96 0.15 0.29 16 21 O -0.17 -0.86 18.44 -29.46 -0.54 -1.40 16 22 O -0.13 -0.71 14.62 -35.97 -0.53 -1.24 16 23 C -0.04 0.01 5.26 -104.61 -0.55 -0.54 16 24 C -0.07 0.01 1.74 36.01 0.06 0.07 16 25 O -0.52 -0.20 11.80 -55.48 -0.65 -0.86 16 26 Si 0.67 -1.46 29.91 -169.99 -5.08 -6.54 16 27 C -0.18 0.34 7.65 -39.46 -0.30 0.04 16 28 H 0.11 -0.59 8.14 -51.93 -0.42 -1.01 16 29 H 0.06 -0.35 7.65 -51.93 -0.40 -0.74 16 30 H 0.07 -0.43 7.67 -51.93 -0.40 -0.83 16 31 H 0.10 -0.44 7.66 -51.93 -0.40 -0.83 16 32 H 0.10 -0.42 7.66 -51.93 -0.40 -0.81 16 33 H 0.41 -2.00 8.73 -40.82 -0.36 -2.35 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.10 -0.25 8.12 -51.93 -0.42 -0.67 16 36 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.17 -0.33 5.85 -52.49 -0.31 -0.64 16 42 H 0.14 0.23 6.07 -51.93 -0.32 -0.08 16 43 H 0.37 -1.56 8.70 45.56 0.40 -1.16 16 44 H -0.25 0.04 7.11 56.52 0.40 0.44 16 45 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 46 H 0.16 -0.81 3.36 -52.48 -0.18 -0.98 16 LS Contribution 390.28 15.07 5.88 5.88 Total: 0.00 -12.48 390.28 -8.99 -21.48 By element: Atomic # 1 Polarization: -8.11 SS G_CDS: -5.72 Total: -13.83 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -0.80 Total: -0.03 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -0.13 Total: 1.47 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: -3.13 Total: -8.43 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.08 Total: -6.54 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -12.48 -8.99 -21.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549636.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.735 kcal (2) G-P(sol) polarization free energy of solvation -12.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.477 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds