Wall clock time and date at job start Mon Mar 8 2021 04:11:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42894 * 114.00393 * 2 1 4 4 H 1.09002 * 112.90574 * 341.24841 * 3 2 1 5 5 C 1.53779 * 113.61588 * 112.50113 * 3 2 1 6 6 C 1.53779 * 87.08402 * 139.98302 * 5 3 2 7 7 H 1.09000 * 113.61527 * 89.11480 * 6 5 3 8 8 N 1.46502 * 113.69422 * 220.01038 * 6 5 3 9 9 C 1.34770 * 120.00218 * 252.53677 * 8 6 5 10 10 O 1.21283 * 119.99821 * 359.97438 * 9 8 6 11 11 C 1.50701 * 120.00331 * 179.97438 * 9 8 6 12 12 O 1.42901 * 109.46996 * 180.02562 * 11 9 8 13 13 C 1.35904 * 116.99969 * 180.02562 * 12 11 9 14 14 C 1.38705 * 120.05890 * 179.97438 * 13 12 11 15 15 N 1.48009 * 120.02620 * 359.94788 * 14 13 12 16 16 O 1.21792 * 119.99590 * 180.02562 * 15 14 13 17 17 O 1.21801 * 119.99956 * 0.02562 * 15 14 13 18 18 C 1.38169 * 119.94358 * 179.97438 * 14 13 12 19 19 C 1.38236 * 120.05793 * 0.02562 * 18 14 13 20 20 C 1.50700 * 119.94504 * 179.97438 * 19 18 14 21 21 O 1.42904 * 109.46798 * 299.99322 * 20 19 18 22 22 Si 1.86302 * 109.47123 * 179.97438 * 20 19 18 23 23 C 1.38294 * 120.10966 * 359.97438 * 19 18 14 24 24 C 1.38117 * 120.05665 * 359.74919 * 23 19 18 25 25 C 1.53784 * 113.61434 * 209.99830 * 3 2 1 26 26 H 1.08994 * 109.46959 * 300.00297 * 1 2 3 27 27 H 1.09007 * 109.46503 * 60.00032 * 1 2 3 28 28 H 1.08995 * 109.47463 * 179.97438 * 1 2 3 29 29 H 1.09006 * 113.61307 * 25.43504 * 5 3 2 30 30 H 1.09007 * 113.61642 * 254.53261 * 5 3 2 31 31 H 0.97001 * 119.99708 * 72.52502 * 8 6 5 32 32 H 1.08996 * 109.46761 * 299.99334 * 11 9 8 33 33 H 1.08995 * 109.46952 * 59.99377 * 11 9 8 34 34 H 1.08003 * 119.96775 * 179.97438 * 18 14 13 35 35 H 1.08993 * 109.47189 * 59.99694 * 20 19 18 36 36 H 0.96697 * 113.99937 * 300.00552 * 21 20 19 37 37 H 1.48498 * 110.00100 * 179.97438 * 22 20 19 38 38 H 1.48497 * 110.00126 * 301.31544 * 22 20 19 39 39 H 1.08003 * 119.96872 * 180.02562 * 23 19 18 40 40 H 1.08008 * 120.02835 * 180.27727 * 24 23 19 41 41 H 1.09004 * 113.61451 * 105.47160 * 25 3 2 42 42 H 1.08994 * 113.61477 * 334.56462 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3144 2.0797 -0.3228 5 6 2.7535 1.6488 1.3017 6 6 3.8228 2.3180 0.4223 7 1 3.6224 3.3692 0.2149 8 7 5.1943 2.0797 0.8790 9 6 5.8954 3.0760 1.4553 10 8 5.3911 4.1701 1.5953 11 6 7.3059 2.8308 1.9257 12 8 7.8327 4.0299 2.4973 13 6 9.1047 3.9795 2.9733 14 6 9.6793 5.1071 3.5408 15 7 8.9080 6.3674 3.6278 16 8 9.4132 7.3573 4.1259 17 8 7.7681 6.4144 3.2013 18 6 10.9724 5.0531 4.0244 19 6 11.6937 3.8766 3.9425 20 6 13.1041 3.8207 4.4703 21 8 13.9118 4.7709 3.7725 22 14 13.7957 2.1099 4.2140 23 6 11.1230 2.7509 3.3771 24 6 9.8287 2.7982 2.8974 25 6 3.3757 1.3717 -0.7045 26 1 -0.3633 0.5139 0.8899 27 1 -0.3632 0.5139 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1167 0.7738 1.8410 30 1 2.2141 2.3476 1.9412 31 1 5.5977 1.2047 0.7668 32 1 7.3063 2.0403 2.6762 33 1 7.9236 2.5290 1.0799 34 1 11.4204 5.9310 4.4661 35 1 13.1035 4.0563 5.5345 36 1 13.9580 4.6222 2.8181 37 1 15.1866 2.0417 4.7298 38 1 12.9464 1.1094 4.9088 39 1 11.6885 1.8329 3.3146 40 1 9.3819 1.9175 2.4599 41 1 3.3386 1.8469 -1.6848 42 1 3.9089 0.4211 -0.7137 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_4549638.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:25 Heat of formation + Delta-G solvation = -77.611382 kcal Electronic energy + Delta-G solvation = -28888.095726 eV Core-core repulsion = 24419.694613 eV Total energy + Delta-G solvation = -4468.401113 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.129 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.02596 -41.80934 -41.19773 -40.13046 -39.28713 -37.57985 -37.28452 -37.11245 -34.39910 -33.49557 -32.38660 -30.14933 -27.87877 -27.59948 -26.90317 -26.74730 -25.14488 -23.91051 -22.81286 -21.83271 -21.18012 -20.48441 -19.45252 -19.24041 -18.49375 -18.34780 -18.24727 -18.22417 -17.67524 -17.20824 -16.94591 -16.55191 -16.34896 -16.24555 -16.15227 -15.73730 -15.55414 -15.22451 -14.94392 -14.82075 -14.16971 -14.08296 -13.95044 -13.62989 -13.50350 -13.30906 -12.88668 -12.59476 -12.42012 -12.31098 -12.24376 -12.20181 -12.12505 -11.96852 -11.85132 -11.73740 -10.97873 -10.94177 -10.77440 -10.57625 -10.21763 -9.91276 -5.31133 -1.13730 -0.38881 0.37620 0.52866 0.99923 1.06673 1.35498 1.37001 1.74780 1.92826 2.14511 2.78473 2.97793 3.02449 3.19630 3.23483 3.28041 3.39047 3.42397 3.53045 3.55925 3.60027 3.70066 3.70929 3.75422 4.13563 4.14921 4.18924 4.29765 4.36699 4.39015 4.42304 4.57135 4.58485 4.66861 4.69237 4.79159 4.85092 4.90683 4.92047 5.29203 5.43836 5.69974 6.12766 6.23551 6.32167 6.93530 6.99830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.169 4.169 6 C 0.127 3.873 7 H 0.122 0.878 8 N -0.715 5.715 9 C 0.515 3.485 10 O -0.496 6.496 11 C 0.030 3.970 12 O -0.254 6.254 13 C 0.200 3.800 14 C -0.076 4.076 15 N 0.028 4.972 16 O -0.177 6.177 17 O -0.118 6.118 18 C 0.009 3.991 19 C -0.158 4.158 20 C -0.066 4.066 21 O -0.536 6.536 22 Si 0.692 3.308 23 C -0.025 4.025 24 C -0.209 4.209 25 C -0.143 4.143 26 H 0.043 0.957 27 H 0.044 0.956 28 H 0.087 0.913 29 H 0.095 0.905 30 H 0.078 0.922 31 H 0.403 0.597 32 H 0.102 0.898 33 H 0.103 0.897 34 H 0.164 0.836 35 H 0.121 0.879 36 H 0.381 0.619 37 H -0.248 1.248 38 H -0.254 1.254 39 H 0.149 0.851 40 H 0.157 0.843 41 H 0.083 0.917 42 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.520 -9.876 -4.425 10.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.112 0.888 5 C -0.208 4.208 6 C 0.022 3.978 7 H 0.140 0.860 8 N -0.369 5.369 9 C 0.298 3.702 10 O -0.368 6.368 11 C -0.048 4.048 12 O -0.163 6.163 13 C 0.150 3.850 14 C -0.160 4.160 15 N 0.548 4.452 16 O -0.385 6.385 17 O -0.342 6.342 18 C -0.010 4.010 19 C -0.159 4.159 20 C -0.176 4.176 21 O -0.341 6.341 22 Si 0.593 3.407 23 C -0.043 4.043 24 C -0.228 4.228 25 C -0.181 4.181 26 H 0.062 0.938 27 H 0.063 0.937 28 H 0.106 0.894 29 H 0.113 0.887 30 H 0.096 0.904 31 H 0.238 0.762 32 H 0.120 0.880 33 H 0.121 0.879 34 H 0.182 0.818 35 H 0.138 0.862 36 H 0.229 0.771 37 H -0.173 1.173 38 H -0.179 1.179 39 H 0.166 0.834 40 H 0.174 0.826 41 H 0.102 0.898 42 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.937 -10.100 -3.352 10.816 hybrid contribution -0.525 0.218 0.353 0.669 sum 1.412 -9.882 -2.998 10.423 Atomic orbital electron populations 1.22839 0.80635 1.03104 1.00229 1.87931 1.20111 1.26804 1.94561 1.23443 0.93774 0.85901 0.96386 0.88810 1.24033 0.97429 1.01448 0.97905 1.22259 0.79731 1.00847 0.94978 0.85982 1.45695 1.14993 1.13975 1.62201 1.19854 0.86567 0.85141 0.78599 1.90865 1.69955 1.23246 1.52705 1.22738 0.94550 0.87364 1.00151 1.86505 1.23759 1.34599 1.71409 1.18697 0.84548 0.92048 0.89698 1.20589 0.95110 0.84884 1.15417 1.43338 1.01242 1.01789 0.98788 1.94556 1.73007 1.24910 1.46072 1.94698 1.01389 1.90575 1.47537 1.20834 0.88923 0.99731 0.91487 1.20317 0.98425 0.93062 1.04117 1.25096 0.87477 1.05895 0.99143 1.86562 1.69227 1.53681 1.24620 0.94897 0.80719 0.74071 0.90978 1.21269 0.93953 0.97875 0.91178 1.21276 0.96224 0.97079 1.08244 1.23634 0.95724 1.00300 0.98488 0.93789 0.93742 0.89434 0.88684 0.90374 0.76171 0.88034 0.87894 0.81804 0.86163 0.77125 1.17280 1.17919 0.83404 0.82574 0.89789 0.88413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.38 -0.20 10.71 -35.23 -0.38 -0.58 16 3 C 0.06 -0.08 4.31 -25.92 -0.11 -0.20 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.17 0.20 7.71 -25.92 -0.20 0.00 16 6 C 0.13 -0.19 4.24 -67.12 -0.28 -0.48 16 7 H 0.12 0.00 7.46 -51.93 -0.39 -0.38 16 8 N -0.71 1.86 5.36 -53.01 -0.28 1.57 16 9 C 0.51 0.19 7.91 -10.99 -0.09 0.11 16 10 O -0.50 -2.94 16.10 -14.36 -0.23 -3.17 16 11 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 12 O -0.25 -0.51 7.68 -49.79 -0.38 -0.90 16 13 C 0.20 0.11 6.67 -39.22 -0.26 -0.15 16 14 C -0.08 -0.20 6.87 -79.80 -0.55 -0.75 16 15 N 0.03 0.18 4.45 34.03 0.15 0.34 16 16 O -0.18 -1.28 18.45 -29.46 -0.54 -1.82 16 17 O -0.12 -1.01 17.24 -36.49 -0.63 -1.64 16 18 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 19 C -0.16 0.34 5.39 -104.60 -0.56 -0.22 16 20 C -0.07 0.17 2.82 36.01 0.10 0.27 16 21 O -0.54 0.90 12.77 -35.23 -0.45 0.45 16 22 Si 0.69 -2.67 29.79 -169.99 -5.06 -7.73 16 23 C -0.03 0.10 8.66 -39.61 -0.34 -0.24 16 24 C -0.21 0.73 9.04 -39.43 -0.36 0.37 16 25 C -0.14 0.36 7.66 -25.91 -0.20 0.17 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.04 -0.10 8.14 -51.92 -0.42 -0.52 16 28 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 29 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.40 -2.39 8.73 -40.82 -0.36 -2.74 16 32 H 0.10 -0.59 7.65 -51.93 -0.40 -0.99 16 33 H 0.10 -0.63 7.67 -51.93 -0.40 -1.03 16 34 H 0.16 0.09 7.61 -52.48 -0.40 -0.31 16 35 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 36 H 0.38 -2.17 8.70 45.56 0.40 -1.77 16 37 H -0.25 0.01 7.11 56.52 0.40 0.42 16 38 H -0.25 0.51 7.11 56.52 0.40 0.91 16 39 H 0.15 -0.99 4.87 -52.48 -0.26 -1.25 16 40 H 0.16 -1.11 6.30 -52.48 -0.33 -1.44 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.10 -0.30 8.12 -51.93 -0.42 -0.72 16 LS Contribution 365.02 15.07 5.50 5.50 Total: 0.00 -12.85 365.02 -9.34 -22.19 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -5.11 Total: -13.90 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -1.93 Total: -0.31 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -0.13 Total: 1.91 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -2.61 Total: -7.65 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: -5.06 Total: -7.73 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -12.85 -9.34 -22.19 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549638.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.420 kcal (2) G-P(sol) polarization free energy of solvation -12.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds