Wall clock time and date at job start Mon Mar 8 2021 04:11:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99755 * 2 1 4 4 H 1.08997 * 112.85158 * 18.80779 * 3 2 1 5 5 C 1.53791 * 113.61069 * 150.00201 * 3 2 1 6 6 C 1.53786 * 87.07966 * 140.06508 * 5 3 2 7 7 H 1.08998 * 113.60870 * 89.19954 * 6 5 3 8 8 N 1.46499 * 113.61394 * 220.01815 * 6 5 3 9 9 C 1.34777 * 119.99665 * 205.27970 * 8 6 5 10 10 O 1.21283 * 119.99990 * 359.71991 * 9 8 6 11 11 C 1.50698 * 119.99538 * 179.72653 * 9 8 6 12 12 F 1.39905 * 109.46922 * 299.99311 * 11 9 8 13 13 F 1.39892 * 109.47537 * 59.99660 * 11 9 8 14 14 O 1.42908 * 109.46887 * 180.02562 * 11 9 8 15 15 C 1.35899 * 116.99727 * 179.97438 * 14 11 9 16 16 C 1.38734 * 120.05955 * 359.72512 * 15 14 11 17 17 C 1.38144 * 119.94149 * 179.74547 * 16 15 14 18 18 C 1.38262 * 120.05917 * 0.50015 * 17 16 15 19 19 C 1.50700 * 119.94382 * 179.74340 * 18 17 16 20 20 O 1.42907 * 109.46720 * 120.02684 * 19 18 17 21 21 Si 1.86298 * 109.47344 * 0.03016 * 19 18 17 22 22 C 1.38264 * 120.11099 * 359.77585 * 18 17 16 23 23 C 1.38146 * 120.05611 * 359.97200 * 22 18 17 24 24 C 1.53778 * 87.08287 * 334.56878 * 6 5 3 25 25 H 1.08997 * 109.47236 * 59.99823 * 1 2 3 26 26 H 1.09005 * 109.46928 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46837 * 299.99534 * 1 2 3 28 28 H 1.08999 * 113.61698 * 25.51861 * 5 3 2 29 29 H 1.08999 * 113.68992 * 254.62387 * 5 3 2 30 30 H 0.97001 * 119.99790 * 24.99683 * 8 6 5 31 31 H 1.08003 * 120.02498 * 359.97438 * 16 15 14 32 32 H 1.08008 * 119.96704 * 180.27851 * 17 16 15 33 33 H 1.08999 * 109.47385 * 240.02543 * 19 18 17 34 34 H 0.96695 * 113.99656 * 179.97438 * 20 19 18 35 35 H 1.48496 * 109.99785 * 298.67900 * 21 19 18 36 36 H 1.48499 * 109.99898 * 59.99654 * 21 19 18 37 37 H 1.07994 * 119.97403 * 179.97438 * 22 18 17 38 38 H 1.08002 * 120.02856 * 179.97438 * 23 22 18 39 39 H 1.08997 * 113.61721 * 139.97826 * 24 6 5 40 40 H 1.09004 * 113.61436 * 270.88721 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 0.3238 5 6 3.3756 1.3718 0.7045 6 6 3.8220 2.3199 -0.4210 7 1 3.6221 3.3708 -0.2116 8 7 5.1929 2.0819 -0.8796 9 6 5.8957 3.0807 -1.4496 10 8 5.3914 4.1751 -1.5876 11 6 7.3080 2.8376 -1.9157 12 9 8.0971 2.4468 -0.8285 13 9 7.3125 1.8265 -2.8825 14 8 7.8369 4.0393 -2.4800 15 6 9.1107 3.9910 -2.9513 16 6 9.8385 2.8129 -2.8672 17 6 11.1313 2.7651 -3.3518 18 6 11.7035 3.8928 -3.9109 19 6 13.1159 3.8392 -4.4335 20 8 13.1202 4.1537 -5.8276 21 14 13.8072 2.1278 -4.1810 22 6 10.9822 5.0696 -3.9907 23 6 9.6872 5.1213 -3.5123 24 6 2.7531 1.6512 -1.3013 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 3.9095 0.4216 0.7125 29 1 3.3396 1.8453 1.6857 30 1 5.5961 1.2067 -0.7692 31 1 9.3935 1.9330 -2.4265 32 1 11.6968 1.8469 -3.2906 33 1 13.7298 4.5620 -3.8962 34 1 13.9986 4.1386 -6.2314 35 1 13.8377 1.8011 -2.7327 36 1 12.9789 1.1330 -4.9087 37 1 11.4314 5.9492 -4.4275 38 1 9.1243 6.0409 -3.5745 39 1 2.2132 2.3505 -1.9397 40 1 3.1168 0.7772 -1.8418 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4549640.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:28 Heat of formation + Delta-G solvation = -176.086433 kcal Electronic energy + Delta-G solvation = -28215.611129 eV Core-core repulsion = 23635.048302 eV Total energy + Delta-G solvation = -4580.562828 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.116 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.02383 -48.99763 -41.69015 -41.41697 -40.12957 -39.26486 -37.48670 -37.28145 -34.70426 -32.65193 -32.22515 -29.40872 -27.77782 -26.86855 -26.43546 -25.25418 -24.34612 -22.74496 -22.38520 -21.41604 -20.72115 -19.82492 -19.75387 -18.46831 -18.39246 -18.12688 -17.31434 -16.99823 -16.87015 -16.58509 -16.50695 -16.12202 -15.91140 -15.84881 -15.73829 -15.49541 -15.38653 -15.24726 -15.10030 -14.83994 -14.55326 -14.43752 -14.00663 -13.73928 -13.67248 -13.54987 -13.26257 -12.86710 -12.58676 -12.37636 -12.28380 -12.26919 -11.99032 -11.94704 -11.61430 -10.59986 -10.49597 -10.38161 -10.33680 -9.68256 -4.97162 -0.13082 -0.02358 0.34443 0.51014 1.27999 1.55023 1.61771 1.87685 1.94936 2.29580 2.58642 2.93253 3.08609 3.25647 3.29524 3.39714 3.40157 3.50636 3.67578 3.80127 3.81259 3.91777 4.08491 4.20904 4.24524 4.44829 4.45789 4.50645 4.53416 4.64208 4.66297 4.71262 4.76648 4.81926 4.86636 4.87684 4.90209 5.13386 5.19663 5.25052 5.67395 5.74908 6.21378 6.33429 6.91139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.063 3.937 4 H 0.110 0.890 5 C -0.133 4.133 6 C 0.118 3.882 7 H 0.124 0.876 8 N -0.674 5.674 9 C 0.521 3.479 10 O -0.503 6.503 11 C 0.431 3.569 12 F -0.172 7.172 13 F -0.174 7.174 14 O -0.300 6.300 15 C 0.086 3.914 16 C -0.194 4.194 17 C -0.101 4.101 18 C -0.109 4.109 19 C -0.073 4.073 20 O -0.563 6.563 21 Si 0.771 3.229 22 C -0.053 4.053 23 C -0.129 4.129 24 C -0.168 4.168 25 H 0.048 0.952 26 H 0.091 0.909 27 H 0.054 0.946 28 H 0.104 0.896 29 H 0.100 0.900 30 H 0.423 0.577 31 H 0.138 0.862 32 H 0.127 0.873 33 H 0.103 0.897 34 H 0.405 0.595 35 H -0.288 1.288 36 H -0.299 1.299 37 H 0.163 0.837 38 H 0.156 0.844 39 H 0.079 0.921 40 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.966 -1.178 1.398 2.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.004 3.996 4 H 0.128 0.872 5 C -0.171 4.171 6 C 0.015 3.985 7 H 0.141 0.859 8 N -0.327 5.327 9 C 0.299 3.701 10 O -0.377 6.377 11 C 0.354 3.646 12 F -0.153 7.153 13 F -0.155 7.155 14 O -0.217 6.217 15 C 0.043 3.957 16 C -0.212 4.212 17 C -0.118 4.118 18 C -0.109 4.109 19 C -0.183 4.183 20 O -0.373 6.373 21 Si 0.677 3.323 22 C -0.071 4.071 23 C -0.148 4.148 24 C -0.207 4.207 25 H 0.067 0.933 26 H 0.110 0.890 27 H 0.073 0.927 28 H 0.122 0.878 29 H 0.118 0.882 30 H 0.261 0.739 31 H 0.155 0.845 32 H 0.144 0.856 33 H 0.121 0.879 34 H 0.257 0.743 35 H -0.215 1.215 36 H -0.227 1.227 37 H 0.181 0.819 38 H 0.173 0.827 39 H 0.098 0.902 40 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.813 -1.181 1.719 2.239 hybrid contribution -0.377 -0.411 0.166 0.582 sum 0.436 -1.592 1.885 2.505 Atomic orbital electron populations 1.22971 0.79693 1.03731 1.00915 1.87909 1.21288 1.27666 1.94626 1.23531 0.94267 0.85895 0.95858 0.87230 1.23618 0.95047 1.00084 0.98382 1.22587 0.77905 1.01585 0.96431 0.85861 1.45753 1.15252 1.13400 1.58318 1.19340 0.84383 0.86220 0.80200 1.90848 1.68631 1.24250 1.53951 1.21893 0.89861 0.76527 0.76343 1.93193 1.76412 1.90800 1.54928 1.93192 1.96816 1.61309 1.64202 1.86644 1.28555 1.32602 1.73925 1.19193 0.82420 0.96196 0.97899 1.21503 0.96522 0.97528 1.05692 1.20823 0.94545 0.97892 0.98555 1.19809 0.96935 0.93815 1.00363 1.24726 0.94813 1.13049 0.85735 1.86437 1.36966 1.93554 1.20329 0.94424 0.86800 0.73085 0.77944 1.21158 0.92039 0.98565 0.95301 1.20836 0.96175 0.97311 1.00441 1.24035 0.97039 1.01352 0.98275 0.93348 0.89007 0.92739 0.87785 0.88194 0.73873 0.84454 0.85593 0.87915 0.74322 1.21531 1.22747 0.81923 0.82658 0.90203 0.88795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -0.42 10.72 -148.98 -1.60 -2.01 16 3 C 0.06 -0.20 4.31 31.13 0.13 -0.06 16 4 H 0.11 -0.67 7.87 -2.39 -0.02 -0.69 16 5 C -0.13 0.68 7.66 31.13 0.24 0.92 16 6 C 0.12 -0.28 4.24 45.52 0.19 -0.09 16 7 H 0.12 -0.13 7.46 -2.39 -0.02 -0.15 16 8 N -0.67 0.57 5.35 -440.04 -2.36 -1.78 16 9 C 0.52 3.14 7.34 87.66 0.64 3.79 16 10 O -0.50 -6.28 16.10 16.00 0.26 -6.03 16 11 C 0.43 2.98 2.05 71.24 0.15 3.12 16 12 F -0.17 -0.92 15.27 44.97 0.69 -0.23 16 13 F -0.17 -1.06 15.31 44.97 0.69 -0.38 16 14 O -0.30 -3.30 9.60 -73.37 -0.70 -4.00 16 15 C 0.09 0.83 6.48 22.51 0.15 0.98 16 16 C -0.19 -1.72 8.26 22.37 0.18 -1.54 16 17 C -0.10 -0.77 8.66 22.25 0.19 -0.58 16 18 C -0.11 -0.58 5.42 -19.85 -0.11 -0.69 16 19 C -0.07 0.08 2.81 71.24 0.20 0.28 16 20 O -0.56 0.64 12.74 -148.98 -1.90 -1.26 16 21 Si 0.77 -1.44 29.78 68.60 2.04 0.60 16 22 C -0.05 -0.22 9.60 22.25 0.21 -0.01 16 23 C -0.13 -0.82 9.99 22.37 0.22 -0.60 16 24 C -0.17 0.35 7.71 31.12 0.24 0.59 16 25 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 26 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 27 H 0.05 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.10 -0.57 8.12 -2.39 -0.02 -0.59 16 29 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 30 H 0.42 -2.32 8.73 -92.71 -0.81 -3.13 16 31 H 0.14 0.99 5.10 -2.91 -0.01 0.98 16 32 H 0.13 0.78 4.87 -2.91 -0.01 0.77 16 33 H 0.10 -0.61 7.96 -2.39 -0.02 -0.63 16 34 H 0.41 -4.77 8.74 -74.06 -0.65 -5.42 16 35 H -0.29 -1.02 7.11 99.48 0.71 -0.31 16 36 H -0.30 -1.87 7.11 99.48 0.71 -1.16 16 37 H 0.16 -0.10 8.06 -2.91 -0.02 -0.12 16 38 H 0.16 0.46 8.06 -2.91 -0.02 0.43 16 39 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 40 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 Total: 0.00 -20.46 348.31 0.69 -19.77 By element: Atomic # 1 Polarization: -11.64 SS G_CDS: -0.31 Total: -11.95 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: 3.88 Total: 7.27 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -2.36 Total: -1.78 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: -3.94 Total: -13.30 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 1.38 Total: -0.61 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: 2.04 Total: 0.60 kcal Total: -20.46 0.69 -19.77 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4549640.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.319 kcal (2) G-P(sol) polarization free energy of solvation -20.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds