Wall clock time and date at job start Mon Mar 8 2021 04:11:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42903 * 113.99606 * 2 1 4 4 H 1.08998 * 112.85467 * 18.80326 * 3 2 1 5 5 C 1.53781 * 113.61409 * 150.00188 * 3 2 1 6 6 C 1.53777 * 87.08341 * 139.97488 * 5 3 2 7 7 H 1.08999 * 113.61305 * 89.19717 * 6 5 3 8 8 N 1.46495 * 113.61996 * 220.01853 * 6 5 3 9 9 C 1.34781 * 120.00361 * 205.00501 * 8 6 5 10 10 O 1.21551 * 119.99471 * 359.97438 * 9 8 6 11 11 C 1.47845 * 119.99802 * 179.97438 * 9 8 6 12 12 C 1.39562 * 120.13955 * 179.97438 * 11 9 8 13 13 C 1.50692 * 120.07411 * 359.97438 * 12 11 9 14 14 O 1.42905 * 109.47141 * 179.72558 * 13 12 11 15 15 C 1.35901 * 117.00063 * 180.02562 * 14 13 12 16 16 C 1.38713 * 120.05607 * 179.97438 * 15 14 13 17 17 C 1.38165 * 119.94238 * 179.97438 * 16 15 14 18 18 C 1.50699 * 119.96726 * 180.02562 * 17 16 15 19 19 O 1.42894 * 109.47399 * 64.99941 * 18 17 16 20 20 Si 1.86305 * 109.46829 * 185.00129 * 18 17 16 21 21 C 1.38245 * 120.05717 * 359.97438 * 17 16 15 22 22 C 1.38286 * 120.11203 * 0.02562 * 21 17 16 23 23 C 1.38119 * 120.05454 * 359.97438 * 22 21 17 24 24 C 1.37977 * 119.84664 * 179.72700 * 12 11 9 25 25 C 1.38331 * 120.15087 * 0.24505 * 24 12 11 26 26 C 1.38385 * 120.29014 * 0.03053 * 25 24 12 27 27 C 1.37935 * 120.14596 * 359.97068 * 26 25 24 28 28 C 1.53777 * 113.61081 * 247.49465 * 3 2 1 29 29 H 1.09004 * 109.46852 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46777 * 299.99825 * 1 2 3 31 31 H 1.08994 * 109.47040 * 60.00032 * 1 2 3 32 32 H 1.09004 * 113.61341 * 25.42571 * 5 3 2 33 33 H 1.08996 * 113.69187 * 254.53597 * 5 3 2 34 34 H 0.97006 * 119.99720 * 24.99727 * 8 6 5 35 35 H 1.09007 * 109.47135 * 59.72820 * 13 12 11 36 36 H 1.08998 * 109.47587 * 299.72618 * 13 12 11 37 37 H 1.07994 * 120.02419 * 0.25672 * 16 15 14 38 38 H 1.09005 * 109.47415 * 304.99564 * 18 17 16 39 39 H 0.96705 * 113.99954 * 60.00047 * 19 18 17 40 40 H 1.48499 * 109.99900 * 58.68193 * 20 18 17 41 41 H 1.48506 * 109.99755 * 179.97438 * 20 18 17 42 42 H 1.07999 * 119.94104 * 180.02562 * 21 17 16 43 43 H 1.08000 * 119.97222 * 180.02562 * 22 21 17 44 44 H 1.08010 * 120.02819 * 180.02562 * 23 22 21 45 45 H 1.08008 * 119.92052 * 180.23295 * 24 12 11 46 46 H 1.08000 * 119.85494 * 180.02562 * 25 24 12 47 47 H 1.08006 * 119.92529 * 179.97438 * 26 25 24 48 48 H 1.07998 * 120.07024 * 180.02562 * 27 26 25 49 49 H 1.09001 * 113.61386 * 105.46926 * 28 3 2 50 50 H 1.09005 * 113.61682 * 334.57285 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0790 0.3237 5 6 3.3755 1.3720 0.7045 6 6 3.8227 2.3182 -0.4223 7 1 3.6234 3.3695 -0.2144 8 7 5.1934 2.0787 -0.8805 9 6 5.8950 3.0747 -1.4569 10 8 5.3902 4.1715 -1.5970 11 6 7.2785 2.8331 -1.9187 12 6 8.0075 3.8621 -2.5165 13 6 7.3862 5.2235 -2.6938 14 8 8.3270 6.0987 -3.3191 15 6 7.9219 7.3748 -3.5524 16 6 8.7845 8.2782 -4.1558 17 6 8.3701 9.5748 -4.3923 18 6 9.3065 10.5565 -5.0483 19 8 9.5850 10.1300 -6.3834 20 14 8.5120 12.2413 -5.0875 21 6 7.0968 9.9721 -4.0286 22 6 6.2351 9.0734 -3.4269 23 6 6.6445 7.7761 -3.1883 24 6 9.3002 3.6315 -2.9402 25 6 9.8721 2.3824 -2.7782 26 6 9.1527 1.3561 -2.1914 27 6 7.8595 1.5733 -1.7635 28 6 2.7534 1.6489 -1.3017 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 3.9088 0.4214 0.7138 33 1 3.3398 1.8469 1.6849 34 1 5.5961 1.2033 -0.7688 35 1 7.1079 5.6255 -1.7195 36 1 6.4975 5.1387 -3.3192 37 1 9.7774 7.9669 -4.4446 38 1 10.2362 10.6064 -4.4814 39 1 8.8015 10.0631 -6.9464 40 1 8.1885 12.6825 -3.7070 41 1 9.4258 13.2188 -5.7316 42 1 6.7747 10.9860 -4.2147 43 1 5.2408 9.3860 -3.1440 44 1 5.9709 7.0744 -2.7187 45 1 9.8668 4.4281 -3.3996 46 1 10.8844 2.2073 -3.1112 47 1 9.6048 0.3831 -2.0682 48 1 7.2993 0.7716 -1.3053 49 1 2.2139 2.3476 -1.9412 50 1 3.1166 0.7740 -1.8410 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4557126.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:31 Heat of formation + Delta-G solvation = -55.741096 kcal Electronic energy + Delta-G solvation = -32459.929614 eV Core-core repulsion = 27999.513504 eV Total energy + Delta-G solvation = -4460.416111 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.86009 -41.23703 -40.42174 -39.34457 -38.90663 -37.32534 -37.24872 -34.58612 -33.32506 -32.49961 -32.03293 -31.02718 -28.07740 -27.71201 -26.80074 -26.68189 -25.63519 -24.31307 -23.62799 -23.03038 -21.88524 -21.65237 -20.99863 -19.15068 -18.91252 -18.27765 -17.89791 -17.41576 -17.20576 -17.11745 -16.93232 -16.66929 -16.38091 -16.28673 -16.14218 -15.84679 -15.68709 -15.55568 -15.36867 -14.97693 -14.86230 -14.55882 -14.36925 -14.21692 -14.10143 -13.72894 -13.51797 -13.45807 -13.31971 -12.96996 -12.87003 -12.72020 -12.51291 -12.29747 -12.25680 -12.14068 -12.11633 -12.02759 -11.86297 -11.68892 -10.93427 -10.49874 -10.49549 -10.28825 -10.00274 -9.97800 -9.83275 -9.29644 -4.98923 -0.28884 0.16846 0.24576 0.36004 1.29173 1.65507 1.72126 1.91407 1.95904 2.04330 2.63494 2.70921 2.91319 3.39192 3.45248 3.51601 3.56596 3.59389 3.66013 3.77459 3.80372 3.83300 3.87393 4.02266 4.08671 4.17385 4.21096 4.23424 4.28629 4.33146 4.38777 4.42571 4.49713 4.50476 4.54029 4.62774 4.69336 4.70210 4.72656 4.84446 4.88513 4.92481 4.93884 4.94544 5.00412 5.16736 5.22649 5.32436 5.35696 5.40695 5.41195 5.43959 5.69701 5.80499 6.23867 6.30676 6.39079 6.74491 7.03462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.061 3.939 4 H 0.104 0.896 5 C -0.135 4.135 6 C 0.124 3.876 7 H 0.110 0.890 8 N -0.699 5.699 9 C 0.557 3.443 10 O -0.569 6.569 11 C -0.148 4.148 12 C -0.052 4.052 13 C 0.118 3.882 14 O -0.328 6.328 15 C 0.116 3.884 16 C -0.142 4.142 17 C -0.085 4.085 18 C -0.079 4.079 19 O -0.555 6.555 20 Si 0.787 3.213 21 C -0.154 4.154 22 C -0.074 4.074 23 C -0.211 4.211 24 C -0.123 4.123 25 C -0.089 4.089 26 C -0.123 4.123 27 C -0.077 4.077 28 C -0.166 4.166 29 H 0.092 0.908 30 H 0.052 0.948 31 H 0.047 0.953 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.415 0.585 35 H 0.077 0.923 36 H 0.078 0.922 37 H 0.126 0.874 38 H 0.105 0.895 39 H 0.396 0.604 40 H -0.285 1.285 41 H -0.297 1.297 42 H 0.153 0.847 43 H 0.154 0.846 44 H 0.133 0.867 45 H 0.133 0.867 46 H 0.152 0.848 47 H 0.161 0.839 48 H 0.159 0.841 49 H 0.071 0.929 50 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.887 -4.280 1.280 5.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.003 3.997 4 H 0.121 0.879 5 C -0.173 4.173 6 C 0.019 3.981 7 H 0.128 0.872 8 N -0.351 5.351 9 C 0.346 3.654 10 O -0.449 6.449 11 C -0.152 4.152 12 C -0.053 4.053 13 C 0.044 3.956 14 O -0.242 6.242 15 C 0.071 3.929 16 C -0.161 4.161 17 C -0.085 4.085 18 C -0.188 4.188 19 O -0.363 6.363 20 Si 0.692 3.308 21 C -0.171 4.171 22 C -0.092 4.092 23 C -0.229 4.229 24 C -0.141 4.141 25 C -0.107 4.107 26 C -0.141 4.141 27 C -0.096 4.096 28 C -0.205 4.205 29 H 0.111 0.889 30 H 0.071 0.929 31 H 0.065 0.935 32 H 0.121 0.879 33 H 0.110 0.890 34 H 0.253 0.747 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.144 0.856 38 H 0.123 0.877 39 H 0.246 0.754 40 H -0.212 1.212 41 H -0.225 1.225 42 H 0.170 0.830 43 H 0.172 0.828 44 H 0.151 0.849 45 H 0.150 0.850 46 H 0.169 0.831 47 H 0.179 0.821 48 H 0.176 0.824 49 H 0.090 0.910 50 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -3.324 -2.993 1.640 4.764 hybrid contribution 0.250 -0.655 0.409 0.812 sum -3.074 -3.648 2.049 5.192 Atomic orbital electron populations 1.22958 0.79827 1.03715 1.00784 1.87903 1.21176 1.27770 1.94669 1.23556 0.94262 0.85620 0.96283 0.87861 1.23580 0.95058 1.00267 0.98369 1.22207 0.80059 1.00339 0.95544 0.87214 1.45721 1.14676 1.14313 1.60344 1.18486 0.85618 0.84170 0.77099 1.90727 1.71782 1.25019 1.57419 1.19666 0.94133 0.95645 1.05714 1.19715 0.94964 0.93222 0.97397 1.21508 0.89903 0.86444 0.97786 1.85934 1.42762 1.19279 1.76266 1.19171 0.93613 0.83935 0.96207 1.20316 1.00170 0.92567 1.03002 1.20256 0.95475 0.94153 0.98616 1.25337 1.01923 1.06695 0.84871 1.86470 1.38352 1.90908 1.20578 0.93558 0.84617 0.71378 0.81203 1.21171 0.93188 1.00682 1.02059 1.21248 1.00615 0.91706 0.95600 1.21554 0.95779 0.99140 1.06452 1.21121 0.94164 0.98634 1.00192 1.21767 1.01138 0.92047 0.95770 1.21572 0.94040 1.00722 0.97768 1.21585 0.95953 0.94839 0.97204 1.23984 0.97476 1.01126 0.97949 0.88910 0.92919 0.93458 0.87921 0.89040 0.74693 0.90498 0.90421 0.85648 0.87707 0.75440 1.21154 1.22502 0.83016 0.82815 0.84930 0.84960 0.83071 0.82098 0.82371 0.91046 0.89036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.64 10.71 -148.98 -1.60 -2.24 16 3 C 0.06 -0.13 4.31 31.12 0.13 0.01 16 4 H 0.10 -0.46 7.87 -2.39 -0.02 -0.48 16 5 C -0.13 0.55 7.66 31.12 0.24 0.79 16 6 C 0.12 -0.18 4.24 45.52 0.19 0.01 16 7 H 0.11 0.12 7.46 -2.39 -0.02 0.11 16 8 N -0.70 1.12 5.31 -442.92 -2.35 -1.23 16 9 C 0.56 2.48 7.75 86.79 0.67 3.15 16 10 O -0.57 -5.90 13.01 -3.88 -0.05 -5.95 16 11 C -0.15 -0.46 5.87 -20.09 -0.12 -0.57 16 12 C -0.05 -0.32 5.91 -19.61 -0.12 -0.44 16 13 C 0.12 0.99 3.38 71.23 0.24 1.23 16 14 O -0.33 -3.24 8.62 -92.44 -0.80 -4.03 16 15 C 0.12 1.05 6.69 22.51 0.15 1.20 16 16 C -0.14 -1.11 9.62 22.37 0.22 -0.89 16 17 C -0.08 -0.34 5.35 -19.88 -0.11 -0.45 16 18 C -0.08 -0.17 2.80 71.24 0.20 0.03 16 19 O -0.56 -1.59 12.83 -148.98 -1.91 -3.51 16 20 Si 0.79 -0.74 29.80 68.60 2.04 1.30 16 21 C -0.15 -0.20 8.67 22.28 0.19 -0.01 16 22 C -0.07 -0.18 10.04 22.25 0.22 0.05 16 23 C -0.21 -1.38 9.04 22.37 0.20 -1.18 16 24 C -0.12 -0.49 9.37 22.23 0.21 -0.28 16 25 C -0.09 0.10 10.04 22.33 0.22 0.32 16 26 C -0.12 0.48 10.03 22.23 0.22 0.70 16 27 C -0.08 0.23 9.54 22.53 0.21 0.45 16 28 C -0.17 0.19 7.71 31.12 0.24 0.43 16 29 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 30 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 31 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 32 H 0.10 -0.51 8.12 -2.38 -0.02 -0.53 16 33 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 34 H 0.41 -2.92 6.76 -92.70 -0.63 -3.55 16 35 H 0.08 0.76 6.85 -2.38 -0.02 0.75 16 36 H 0.08 0.76 6.88 -2.39 -0.02 0.74 16 37 H 0.13 1.03 8.06 -2.91 -0.02 1.01 16 38 H 0.11 0.38 7.96 -2.38 -0.02 0.36 16 39 H 0.40 -2.12 8.70 -74.05 -0.64 -2.77 16 40 H -0.28 -1.04 7.11 99.48 0.71 -0.34 16 41 H -0.30 -1.82 7.11 99.48 0.71 -1.11 16 42 H 0.15 -0.65 4.90 -2.91 -0.01 -0.66 16 43 H 0.15 -0.45 8.06 -2.91 -0.02 -0.47 16 44 H 0.13 0.87 6.30 -2.91 -0.02 0.85 16 45 H 0.13 0.63 7.00 -2.91 -0.02 0.61 16 46 H 0.15 -0.85 8.06 -2.91 -0.02 -0.87 16 47 H 0.16 -1.55 8.06 -2.91 -0.02 -1.57 16 48 H 0.16 -1.55 6.41 -2.91 -0.02 -1.57 16 49 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 50 H 0.09 -0.04 8.14 -2.38 -0.02 -0.05 16 Total: 0.00 -20.66 409.66 -0.24 -20.90 By element: Atomic # 1 Polarization: -10.72 SS G_CDS: -0.25 Total: -10.96 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: 4.66 Total: 5.72 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -2.35 Total: -1.23 kcal Atomic # 8 Polarization: -11.37 SS G_CDS: -4.36 Total: -15.73 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.04 Total: 1.30 kcal Total: -20.66 -0.24 -20.90 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4557126.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.841 kcal (2) G-P(sol) polarization free energy of solvation -20.655 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.496 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds