Wall clock time and date at job start Mon Mar 8 2021 04:11:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42894 * 114.00211 * 2 1 4 4 H 1.09000 * 112.85155 * 341.19407 * 3 2 1 5 5 C 1.53954 * 113.67016 * 112.44286 * 3 2 1 6 6 C 1.53772 * 87.02243 * 139.93138 * 5 3 2 7 7 H 1.09005 * 113.61523 * 89.23093 * 6 5 3 8 8 N 1.46500 * 113.61536 * 220.04703 * 6 5 3 9 9 C 1.34782 * 120.00085 * 254.13753 * 8 6 5 10 10 O 1.21277 * 119.99690 * 359.97438 * 9 8 6 11 11 C 1.50694 * 119.99926 * 180.02562 * 9 8 6 12 12 O 1.42901 * 109.46937 * 180.02562 * 11 9 8 13 13 C 1.35905 * 116.99604 * 180.02562 * 12 11 9 14 14 C 1.38719 * 120.05115 * 180.02562 * 13 12 11 15 15 C 1.38169 * 119.93968 * 179.97438 * 14 13 12 16 16 C 1.50698 * 119.96631 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47353 * 299.99450 * 16 15 14 18 18 Si 1.86303 * 109.46818 * 179.97438 * 16 15 14 19 19 C 1.38240 * 120.05585 * 359.97299 * 15 14 13 20 20 C 1.38282 * 120.11355 * 0.02562 * 19 15 14 21 21 C 1.38124 * 120.05644 * 359.74998 * 20 19 15 22 22 C 1.53782 * 87.17574 * 334.63884 * 6 5 3 23 23 H 1.08998 * 109.47065 * 299.99850 * 1 2 3 24 24 H 1.08996 * 109.46947 * 60.00095 * 1 2 3 25 25 H 1.09001 * 109.47365 * 180.02562 * 1 2 3 26 26 H 1.08997 * 113.61146 * 25.40661 * 5 3 2 27 27 H 1.09001 * 113.66358 * 254.46302 * 5 3 2 28 28 H 0.96995 * 119.99981 * 74.14309 * 8 6 5 29 29 H 1.08999 * 109.47314 * 60.00033 * 11 9 8 30 30 H 1.08998 * 109.47471 * 300.00068 * 11 9 8 31 31 H 1.07996 * 120.02463 * 359.95185 * 14 13 12 32 32 H 1.09000 * 109.47168 * 59.99933 * 16 15 14 33 33 H 0.96703 * 114.00012 * 180.02562 * 17 16 15 34 34 H 1.48503 * 110.00161 * 298.67878 * 18 16 15 35 35 H 1.48500 * 109.99925 * 60.00322 * 18 16 15 36 36 H 1.08001 * 119.93877 * 180.02562 * 19 15 14 37 37 H 1.08006 * 119.97245 * 180.02562 * 20 19 15 38 38 H 1.08001 * 120.02871 * 180.27359 * 21 20 19 39 39 H 1.09004 * 113.61445 * 139.93372 * 22 6 5 40 40 H 1.08990 * 113.61320 * 270.75998 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6511 1.3032 6 6 3.8228 2.3180 0.4222 7 1 3.6236 3.3693 0.2142 8 7 5.1935 2.0785 0.8803 9 6 5.8843 3.0655 1.4845 10 8 5.3713 4.1521 1.6486 11 6 7.2945 2.8192 1.9552 12 8 7.8095 4.0077 2.5590 13 6 9.0797 3.9549 3.0395 14 6 9.6427 5.0722 3.6387 15 6 10.9340 5.0159 4.1268 16 6 11.5464 6.2295 4.7774 17 8 11.5781 7.3076 3.8399 18 14 13.2819 5.8311 5.3253 19 6 11.6646 3.8473 4.0190 20 6 11.1056 2.7322 3.4221 21 6 9.8135 2.7819 2.9367 22 6 3.3756 1.3718 -0.7046 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 3.1162 0.7769 1.8440 27 1 2.2146 2.3513 1.9415 28 1 5.6040 1.2095 0.7487 29 1 7.9184 2.5435 1.1050 30 1 7.2978 2.0103 2.6857 31 1 9.0722 5.9853 3.7232 32 1 10.9497 6.5179 5.6428 33 1 11.9610 8.1231 4.1912 34 1 13.2595 4.7328 6.3246 35 1 14.1060 5.4361 4.1548 36 1 12.6737 3.8053 4.4016 37 1 11.6784 1.8202 3.3395 38 1 9.3758 1.9094 2.4746 39 1 3.3384 1.8470 -1.6849 40 1 3.9098 0.4218 -0.7147 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4860298.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:36 Heat of formation + Delta-G solvation = -85.713893 kcal Electronic energy + Delta-G solvation = -22624.417788 eV Core-core repulsion = 18986.681759 eV Total energy + Delta-G solvation = -3637.736029 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.72758 -41.08237 -39.94194 -38.90437 -37.39128 -37.22240 -34.40784 -32.69683 -31.80663 -29.52666 -27.75031 -26.87315 -26.78786 -24.90833 -23.82401 -22.55624 -21.67548 -21.01521 -19.26869 -18.46894 -18.37068 -18.13557 -17.57449 -17.51906 -17.04624 -16.83154 -16.20707 -16.09344 -15.88606 -15.55794 -15.35724 -15.04629 -14.67704 -14.63174 -14.34953 -13.86854 -13.79091 -13.52689 -13.44538 -13.23555 -12.79776 -12.48352 -12.30231 -12.24413 -12.19966 -12.16209 -11.89742 -11.85018 -11.07001 -10.51794 -10.44091 -10.21796 -9.97975 -9.43743 -4.93068 0.06095 0.21671 1.24747 1.33740 1.41115 1.65351 1.96305 2.44901 2.50329 2.90843 3.35025 3.37451 3.47308 3.50294 3.70996 3.74836 3.77946 3.84336 3.84993 3.94808 4.01200 4.14226 4.19205 4.26992 4.38838 4.48731 4.52354 4.54583 4.67897 4.68545 4.82863 4.84136 4.90294 4.91218 4.97178 5.07017 5.18097 5.28461 5.37052 5.52106 6.15409 6.21892 6.38200 6.87281 7.03308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.395 6.395 3 C 0.060 3.940 4 H 0.102 0.898 5 C -0.168 4.168 6 C 0.122 3.878 7 H 0.103 0.897 8 N -0.697 5.697 9 C 0.515 3.485 10 O -0.571 6.571 11 C 0.036 3.964 12 O -0.318 6.318 13 C 0.120 3.880 14 C -0.144 4.144 15 C -0.052 4.052 16 C -0.091 4.091 17 O -0.566 6.566 18 Si 0.789 3.211 19 C -0.181 4.181 20 C -0.071 4.071 21 C -0.202 4.202 22 C -0.131 4.131 23 H 0.046 0.954 24 H 0.052 0.948 25 H 0.093 0.907 26 H 0.095 0.905 27 H 0.068 0.932 28 H 0.422 0.578 29 H 0.126 0.874 30 H 0.127 0.873 31 H 0.124 0.876 32 H 0.091 0.909 33 H 0.404 0.596 34 H -0.283 1.283 35 H -0.294 1.294 36 H 0.123 0.877 37 H 0.159 0.841 38 H 0.167 0.833 39 H 0.092 0.908 40 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.346 -3.782 0.175 4.018 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.314 6.314 3 C 0.002 3.998 4 H 0.120 0.880 5 C -0.207 4.207 6 C 0.017 3.983 7 H 0.121 0.879 8 N -0.351 5.351 9 C 0.301 3.699 10 O -0.450 6.450 11 C -0.042 4.042 12 O -0.231 6.231 13 C 0.075 3.925 14 C -0.163 4.163 15 C -0.052 4.052 16 C -0.199 4.199 17 O -0.376 6.376 18 Si 0.693 3.307 19 C -0.199 4.199 20 C -0.089 4.089 21 C -0.220 4.220 22 C -0.169 4.169 23 H 0.065 0.935 24 H 0.071 0.929 25 H 0.112 0.888 26 H 0.113 0.887 27 H 0.086 0.914 28 H 0.260 0.740 29 H 0.144 0.856 30 H 0.144 0.856 31 H 0.142 0.858 32 H 0.109 0.891 33 H 0.255 0.745 34 H -0.211 1.211 35 H -0.222 1.222 36 H 0.140 0.860 37 H 0.177 0.823 38 H 0.184 0.816 39 H 0.110 0.890 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 1.280 -4.052 -0.044 4.250 hybrid contribution -0.764 -0.329 -0.185 0.852 sum 0.517 -4.381 -0.229 4.417 Atomic orbital electron populations 1.22961 0.79829 1.03754 1.00763 1.87896 1.21165 1.27669 1.94658 1.23585 0.94356 0.85627 0.96259 0.88043 1.24030 0.97497 1.01149 0.97985 1.22183 0.80181 1.00142 0.95793 0.87912 1.45610 1.14696 1.15288 1.59474 1.20534 0.87715 0.84207 0.77433 1.90759 1.71365 1.26341 1.56499 1.22769 0.92290 0.87912 1.01234 1.86129 1.26760 1.37327 1.72914 1.19184 0.83664 0.95004 0.94648 1.20336 0.95704 0.97812 1.02477 1.19508 0.93143 0.94798 0.97760 1.25050 1.12524 0.87842 0.94526 1.86451 1.86688 1.23976 1.40449 0.94227 0.73915 0.84744 0.77794 1.21021 0.99780 0.94493 1.04561 1.21250 0.94609 0.98621 0.94416 1.21616 0.96182 0.97861 1.06383 1.23557 0.94863 1.00260 0.98176 0.93541 0.92920 0.88808 0.88651 0.91370 0.73974 0.85599 0.85577 0.85838 0.89122 0.74486 1.21057 1.22161 0.85999 0.82306 0.81576 0.88980 0.87471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.40 -0.74 10.72 -148.98 -1.60 -2.34 16 3 C 0.06 -0.09 4.31 31.18 0.13 0.05 16 4 H 0.10 -0.35 7.87 -2.39 -0.02 -0.37 16 5 C -0.17 0.08 7.73 31.18 0.24 0.32 16 6 C 0.12 -0.10 4.21 45.52 0.19 0.09 16 7 H 0.10 0.32 7.50 -2.38 -0.02 0.31 16 8 N -0.70 1.92 5.36 -440.05 -2.36 -0.44 16 9 C 0.51 2.20 7.91 87.65 0.69 2.89 16 10 O -0.57 -9.05 16.12 16.02 0.26 -8.79 16 11 C 0.04 -0.04 5.22 71.23 0.37 0.33 16 12 O -0.32 -2.84 9.67 -73.44 -0.71 -3.55 16 13 C 0.12 0.90 6.69 22.51 0.15 1.05 16 14 C -0.14 -1.45 9.55 22.37 0.21 -1.24 16 15 C -0.05 -0.40 5.42 -19.88 -0.11 -0.51 16 16 C -0.09 -0.21 2.81 71.24 0.20 -0.01 16 17 O -0.57 -1.69 12.74 -148.98 -1.90 -3.59 16 18 Si 0.79 -0.97 29.79 68.60 2.04 1.07 16 19 C -0.18 -1.04 8.67 22.28 0.19 -0.85 16 20 C -0.07 -0.13 10.04 22.25 0.22 0.10 16 21 C -0.20 -0.26 9.04 22.36 0.20 -0.06 16 22 C -0.13 0.54 7.66 31.12 0.24 0.77 16 23 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 24 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 25 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 26 H 0.10 -0.05 8.14 -2.39 -0.02 -0.07 16 27 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 28 H 0.42 -4.26 8.71 -92.71 -0.81 -5.07 16 29 H 0.13 -0.94 7.67 -2.39 -0.02 -0.96 16 30 H 0.13 -0.96 7.65 -2.39 -0.02 -0.98 16 31 H 0.12 1.41 8.06 -2.91 -0.02 1.39 16 32 H 0.09 -0.10 7.96 -2.39 -0.02 -0.12 16 33 H 0.40 -3.28 8.74 -74.06 -0.65 -3.93 16 34 H -0.28 -0.94 7.11 99.48 0.71 -0.23 16 35 H -0.29 -1.72 7.11 99.48 0.71 -1.01 16 36 H 0.12 0.53 4.87 -2.91 -0.01 0.52 16 37 H 0.16 -0.70 8.06 -2.91 -0.02 -0.72 16 38 H 0.17 -1.12 6.30 -2.91 -0.02 -1.13 16 39 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 40 H 0.11 -0.61 8.11 -2.39 -0.02 -0.63 16 Total: 0.00 -27.32 339.07 -0.44 -27.76 By element: Atomic # 1 Polarization: -13.89 SS G_CDS: -0.35 Total: -14.24 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: 4.18 Total: 4.12 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -2.36 Total: -0.44 kcal Atomic # 8 Polarization: -14.32 SS G_CDS: -3.95 Total: -18.27 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: 2.04 Total: 1.07 kcal Total: -27.32 -0.44 -27.76 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4860298.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.958 kcal (2) G-P(sol) polarization free energy of solvation -27.320 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.756 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds