Wall clock time and date at job start Mon Mar 8 2021 04:11:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35987 * 116.99972 * 2 1 4 4 C 1.38675 * 119.99658 * 180.02562 * 3 2 1 5 5 C 1.38153 * 119.99676 * 180.02562 * 4 3 2 6 6 C 1.50702 * 119.99941 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.46991 * 104.97969 * 6 5 4 8 8 Si 1.86304 * 109.47130 * 344.98068 * 6 5 4 9 9 C 1.38676 * 120.00206 * 0.02562 * 5 4 3 10 10 O 1.35986 * 120.00156 * 180.02562 * 9 5 4 11 11 C 1.42898 * 116.99975 * 179.97438 * 10 9 5 12 12 C 1.50697 * 109.47229 * 180.02562 * 11 10 9 13 13 O 1.21287 * 119.99740 * 0.02562 * 12 11 10 14 14 N 1.34773 * 120.00592 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00689 * 180.02562 * 14 12 11 16 16 H 1.09008 * 112.90193 * 336.24492 * 15 14 12 17 17 C 1.53947 * 113.66863 * 107.43665 * 15 14 12 18 18 C 1.53781 * 87.01844 * 139.93620 * 17 15 14 19 19 H 1.08997 * 113.61989 * 89.23022 * 18 17 15 20 20 O 1.42905 * 113.61516 * 220.05030 * 18 17 15 21 21 C 1.42899 * 113.99778 * 249.13657 * 20 18 17 22 22 C 1.53776 * 113.61477 * 205.00137 * 15 14 12 23 23 C 1.38717 * 119.99890 * 0.27316 * 9 5 4 24 24 C 1.38112 * 119.99858 * 359.44905 * 23 9 5 25 25 H 1.08999 * 109.47242 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.46948 * 300.00245 * 1 2 3 27 27 H 1.09001 * 109.47081 * 59.99702 * 1 2 3 28 28 H 1.08000 * 120.00399 * 0.04232 * 4 3 2 29 29 H 1.09003 * 109.47496 * 224.97635 * 6 5 4 30 30 H 0.96701 * 114.00626 * 60.00035 * 7 6 5 31 31 H 1.48501 * 109.99857 * 178.68006 * 8 6 5 32 32 H 1.48504 * 109.99597 * 299.99631 * 8 6 5 33 33 H 1.09000 * 109.47368 * 60.00314 * 11 10 9 34 34 H 1.09003 * 109.47124 * 300.00036 * 11 10 9 35 35 H 0.97003 * 119.99265 * 359.97438 * 14 12 11 36 36 H 1.08999 * 113.61428 * 25.41616 * 17 15 14 37 37 H 1.09003 * 113.66831 * 254.45878 * 17 15 14 38 38 H 1.08997 * 109.47171 * 299.99768 * 21 20 18 39 39 H 1.08997 * 109.47442 * 59.99964 * 21 20 18 40 40 H 1.08999 * 109.46926 * 179.97438 * 21 20 18 41 41 H 1.08998 * 113.61633 * 105.46401 * 22 15 14 42 42 H 1.09001 * 113.69195 * 334.57458 * 22 15 14 43 43 H 1.08001 * 119.99893 * 179.70719 * 23 9 5 44 44 H 1.07999 * 119.99956 * 180.25153 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5151 0.0000 6 6 5.5634 2.5940 -0.0012 7 8 6.0197 2.9678 -1.3027 8 14 6.2727 0.9319 0.4520 9 6 3.3032 3.6782 0.0016 10 8 3.9205 4.8898 0.0016 11 6 3.0806 6.0459 0.0027 12 6 3.9348 7.2874 0.0019 13 8 5.1438 7.1916 0.0001 14 7 3.3553 8.5042 0.0033 15 6 4.1856 9.7111 0.0019 16 1 5.1840 9.5396 0.4045 17 6 4.1852 10.4600 -1.3431 18 6 4.1364 11.7622 -0.5265 19 1 5.1206 12.1528 -0.2680 20 8 3.2742 12.7559 -1.0845 21 6 3.9619 13.8914 -1.6134 22 6 3.4839 10.9423 0.5990 23 6 1.9179 3.6056 0.0084 24 6 1.2909 2.3750 0.0021 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 4.0194 0.3784 -0.0016 29 1 5.8888 3.3383 0.7256 30 1 5.6889 3.8248 -1.6045 31 1 7.7563 0.9880 0.4234 32 1 5.8055 0.5319 1.8037 33 1 2.4521 6.0375 0.8932 34 1 2.4506 6.0382 -0.8868 35 1 2.3883 8.5807 0.0044 36 1 3.2901 10.2851 -1.9400 37 1 5.1061 10.3364 -1.9130 38 1 4.5345 14.3714 -0.8199 39 1 4.6377 13.5702 -2.4059 40 1 3.2379 14.5985 -2.0182 41 1 3.8393 11.2074 1.5948 42 1 2.3966 10.9007 0.5350 43 1 1.3298 4.5114 0.0144 44 1 0.2124 2.3185 0.0033 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:39 Heat of formation + Delta-G solvation = -123.608063 kcal Electronic energy + Delta-G solvation = -27176.165064 eV Core-core repulsion = 23062.566009 eV Total energy + Delta-G solvation = -4113.599055 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.86546 -41.24952 -40.24969 -39.57534 -38.14628 -37.29050 -36.91830 -34.38268 -32.81982 -31.06547 -29.55253 -28.00051 -27.71655 -26.79740 -26.60043 -25.05771 -23.54723 -22.42017 -21.76224 -21.05916 -19.56219 -18.84547 -18.51154 -18.13047 -18.03966 -17.51096 -17.40601 -16.86353 -16.61564 -16.28219 -16.18021 -16.05383 -15.69045 -15.48949 -15.34089 -15.19879 -14.86587 -14.44660 -14.19894 -14.10137 -13.62346 -13.54044 -13.50222 -13.37621 -13.05162 -12.79262 -12.53056 -12.31276 -12.24560 -12.17610 -12.03465 -11.88679 -11.45354 -11.31516 -11.24292 -11.01047 -10.51883 -10.19397 -10.10459 -8.83118 -4.93973 0.05712 0.32503 1.32918 1.37209 1.41501 1.57642 1.90861 2.34178 2.50121 2.54335 2.91773 3.36823 3.47166 3.49674 3.55192 3.72503 3.75609 3.84669 3.84931 3.93660 4.05737 4.08587 4.12427 4.20497 4.26805 4.27744 4.44765 4.45273 4.48656 4.52197 4.68124 4.68925 4.69822 4.79646 4.82973 4.90726 4.91667 4.96474 4.98119 5.11629 5.20075 5.37690 5.42087 6.11294 6.21702 6.38511 6.44797 6.50679 7.06165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.119 4.119 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.811 3.189 9 C 0.089 3.911 10 O -0.316 6.316 11 C 0.038 3.962 12 C 0.514 3.486 13 O -0.570 6.570 14 N -0.698 5.698 15 C 0.123 3.877 16 H 0.102 0.898 17 C -0.167 4.167 18 C 0.059 3.941 19 H 0.100 0.900 20 O -0.395 6.395 21 C 0.023 3.977 22 C -0.131 4.131 23 C -0.160 4.160 24 C -0.161 4.161 25 H 0.114 0.886 26 H 0.066 0.934 27 H 0.067 0.933 28 H 0.153 0.847 29 H 0.062 0.938 30 H 0.372 0.628 31 H -0.294 1.294 32 H -0.264 1.264 33 H 0.124 0.876 34 H 0.126 0.874 35 H 0.422 0.578 36 H 0.096 0.904 37 H 0.067 0.933 38 H 0.051 0.949 39 H 0.046 0.954 40 H 0.093 0.907 41 H 0.090 0.910 42 H 0.107 0.893 43 H 0.167 0.833 44 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.122 2.800 -0.053 9.542 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.120 4.120 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.230 6.230 11 C -0.040 4.040 12 C 0.301 3.699 13 O -0.448 6.448 14 N -0.351 5.351 15 C 0.018 3.982 16 H 0.120 0.880 17 C -0.206 4.206 18 C 0.001 3.999 19 H 0.118 0.882 20 O -0.314 6.314 21 C -0.073 4.073 22 C -0.169 4.169 23 C -0.178 4.178 24 C -0.180 4.180 25 H 0.133 0.867 26 H 0.085 0.915 27 H 0.086 0.914 28 H 0.170 0.830 29 H 0.079 0.921 30 H 0.220 0.780 31 H -0.222 1.222 32 H -0.189 1.189 33 H 0.141 0.859 34 H 0.144 0.856 35 H 0.260 0.740 36 H 0.114 0.886 37 H 0.086 0.914 38 H 0.070 0.930 39 H 0.065 0.935 40 H 0.112 0.888 41 H 0.108 0.892 42 H 0.125 0.875 43 H 0.185 0.815 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.402 1.571 0.542 7.587 hybrid contribution -0.512 2.147 0.243 2.220 sum -7.914 3.718 0.785 8.779 Atomic orbital electron populations 1.23355 0.76379 1.05623 1.02362 1.86088 1.23394 1.26296 1.88926 1.18978 0.91936 0.85360 0.99166 1.20183 0.92433 0.96778 1.04236 1.19456 0.96016 0.91002 1.05510 1.25527 0.92858 1.12543 0.87980 1.86658 1.74247 1.42211 1.32004 0.92216 0.76230 0.79003 0.81298 1.18801 0.91745 0.84231 1.00805 1.86082 1.35537 1.11932 1.89465 1.22715 0.92602 0.81824 1.06863 1.20573 0.88370 0.85499 0.75480 1.90768 1.16671 1.87359 1.50049 1.45606 1.11240 1.03870 1.74423 1.22178 0.96068 0.82638 0.97300 0.87971 1.24031 1.03368 0.95663 0.97549 1.23559 0.94661 0.87169 0.94549 0.88218 1.87898 1.34388 1.31007 1.78077 1.22952 0.98300 0.87874 0.98162 1.23550 1.02322 0.92295 0.98716 1.21374 0.92049 1.00041 1.04333 1.21421 1.01605 0.90920 1.04043 0.86728 0.91542 0.91421 0.83035 0.92072 0.78012 1.22171 1.18943 0.85865 0.85638 0.74023 0.88558 0.91375 0.92998 0.93545 0.88804 0.89153 0.87454 0.81545 0.82109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.73 10.50 -93.41 -0.98 -1.71 16 3 C 0.09 0.25 6.69 22.49 0.15 0.40 16 4 C -0.12 -0.54 8.59 22.35 0.19 -0.34 16 5 C -0.12 -0.74 5.27 -19.78 -0.10 -0.84 16 6 C -0.08 -0.69 2.33 71.24 0.17 -0.52 16 7 O -0.55 -5.56 12.65 -148.98 -1.89 -7.44 16 8 Si 0.81 4.46 30.17 68.60 2.07 6.53 16 9 C 0.09 0.32 6.62 22.49 0.15 0.47 16 10 O -0.32 -1.49 8.56 -74.36 -0.64 -2.13 16 11 C 0.04 -0.15 5.22 71.24 0.37 0.22 16 12 C 0.51 1.00 7.91 87.66 0.69 1.69 16 13 O -0.57 -7.59 16.10 15.99 0.26 -7.33 16 14 N -0.70 3.02 5.36 -439.77 -2.36 0.67 16 15 C 0.12 -0.23 4.24 45.57 0.19 -0.04 16 16 H 0.10 0.24 7.47 -2.38 -0.02 0.22 16 17 C -0.17 0.24 7.73 31.18 0.24 0.48 16 18 C 0.06 -0.12 4.30 31.12 0.13 0.01 16 19 H 0.10 -0.38 7.88 -2.39 -0.02 -0.40 16 20 O -0.39 -0.54 10.71 -148.98 -1.60 -2.14 16 21 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 22 C -0.13 0.62 7.66 31.12 0.24 0.86 16 23 C -0.16 0.36 9.03 22.35 0.20 0.56 16 24 C -0.16 0.29 9.03 22.35 0.20 0.49 16 25 H 0.11 -0.96 8.14 -2.39 -0.02 -0.98 16 26 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 27 H 0.07 -0.55 7.66 -2.39 -0.02 -0.56 16 28 H 0.15 0.26 5.13 -2.91 -0.01 0.25 16 29 H 0.06 0.67 7.82 -2.39 -0.02 0.65 16 30 H 0.37 2.88 8.60 -74.06 -0.64 2.25 16 31 H -0.29 -3.47 7.11 99.48 0.71 -2.76 16 32 H -0.26 -1.94 7.11 99.48 0.71 -1.24 16 33 H 0.12 -1.24 7.65 -2.39 -0.02 -1.26 16 34 H 0.13 -1.30 7.67 -2.39 -0.02 -1.32 16 35 H 0.42 -4.86 8.73 -92.71 -0.81 -5.67 16 36 H 0.10 -0.16 8.14 -2.39 -0.02 -0.18 16 37 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 38 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 41 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 42 H 0.11 -0.69 8.12 -2.39 -0.02 -0.71 16 43 H 0.17 -1.64 6.29 -2.91 -0.02 -1.66 16 44 H 0.16 -1.22 6.29 -2.91 -0.02 -1.24 16 Total: 0.00 -24.12 367.52 -0.32 -24.44 By element: Atomic # 1 Polarization: -16.15 SS G_CDS: -0.37 Total: -16.52 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: 5.17 Total: 5.62 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -2.36 Total: 0.67 kcal Atomic # 8 Polarization: -15.90 SS G_CDS: -4.84 Total: -20.74 kcal Atomic # 14 Polarization: 4.46 SS G_CDS: 2.07 Total: 6.53 kcal Total: -24.12 -0.32 -24.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.166 kcal (2) G-P(sol) polarization free energy of solvation -24.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.608 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds