Wall clock time and date at job start Mon Mar 8 2021 04:11:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35900 * 116.99788 * 2 1 4 4 C 1.38616 * 120.02653 * 180.27238 * 3 2 1 5 5 C 1.38657 * 119.88671 * 180.25164 * 4 3 2 6 6 O 1.35904 * 120.02381 * 179.75190 * 5 4 3 7 7 C 1.42896 * 117.00080 * 359.72801 * 6 5 4 8 8 C 1.50696 * 109.47216 * 179.97438 * 7 6 5 9 9 O 1.21284 * 120.00109 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00137 * 179.97438 * 8 7 6 11 11 C 1.46506 * 119.99873 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.84868 * 334.67073 * 11 10 8 13 13 C 1.53782 * 113.60942 * 105.86633 * 11 10 8 14 14 C 1.53962 * 87.01677 * 139.95042 * 13 11 10 15 15 H 1.09003 * 113.61078 * 89.19816 * 14 13 11 16 16 O 1.42897 * 113.66869 * 220.06362 * 14 13 11 17 17 C 1.42900 * 114.00215 * 247.56347 * 16 14 13 18 18 C 1.53781 * 87.11132 * 334.63696 * 14 13 11 19 19 C 1.38747 * 119.94803 * 359.47937 * 5 4 3 20 20 C 1.50696 * 119.97453 * 180.23219 * 19 5 4 21 21 O 1.42901 * 109.47488 * 74.99528 * 20 19 5 22 22 Si 1.86301 * 109.47371 * 194.99866 * 20 19 5 23 23 C 1.38197 * 120.05300 * 0.24906 * 19 5 4 24 24 C 1.38152 * 120.10997 * 0.02565 * 23 19 5 25 25 H 1.08999 * 109.46867 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47038 * 299.99364 * 1 2 3 27 27 H 1.08996 * 109.47357 * 60.00029 * 1 2 3 28 28 H 1.08000 * 120.05602 * 359.97438 * 4 3 2 29 29 H 1.09004 * 109.47251 * 59.99775 * 7 6 5 30 30 H 1.09000 * 109.47075 * 299.99668 * 7 6 5 31 31 H 0.96995 * 120.00018 * 0.27749 * 10 8 7 32 32 H 1.08994 * 113.61532 * 254.52460 * 13 11 10 33 33 H 1.08994 * 113.61779 * 25.43814 * 13 11 10 34 34 H 1.09002 * 109.46817 * 179.97438 * 17 16 14 35 35 H 1.08999 * 109.46447 * 299.99684 * 17 16 14 36 36 H 1.08997 * 109.47010 * 59.99688 * 17 16 14 37 37 H 1.09003 * 113.61141 * 270.80985 * 18 14 13 38 38 H 1.09002 * 113.61683 * 139.90949 * 18 14 13 39 39 H 1.09003 * 109.47099 * 314.99318 * 20 19 5 40 40 H 0.96708 * 113.99680 * 60.00393 * 21 20 19 41 41 H 1.48504 * 109.99752 * 58.67637 * 22 20 19 42 42 H 1.48498 * 110.00384 * 179.97438 * 22 20 19 43 43 H 1.08002 * 119.94317 * 180.02562 * 23 19 5 44 44 H 1.08006 * 119.97471 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 -0.0057 5 6 4.0565 2.5211 -0.0004 6 8 5.4135 2.5961 -0.0009 7 6 6.1316 1.3607 -0.0009 8 6 7.6124 1.6403 -0.0021 9 8 8.0134 2.7849 -0.0033 10 7 8.4911 0.6185 -0.0019 11 6 9.9307 0.8904 -0.0036 12 1 10.1777 1.8606 -0.4346 13 6 10.6088 0.6276 1.3515 14 6 11.7851 0.0322 0.5564 15 1 12.5410 0.7670 0.2791 16 8 12.3437 -1.1411 1.1508 17 6 13.6717 -0.9649 1.6482 18 6 10.7753 -0.2659 -0.5644 19 6 3.2970 3.6822 -0.0003 20 6 3.9772 5.0269 0.0001 21 8 4.5038 5.2949 -1.3010 22 14 2.7435 6.3468 0.4547 23 6 1.9171 3.6065 -0.0003 24 6 1.2905 2.3753 0.0001 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5137 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 4.0196 0.3793 -0.0097 29 1 5.8696 0.7882 -0.8908 30 1 5.8702 0.7885 0.8892 31 1 8.1705 -0.2970 -0.0050 32 1 10.8641 1.5369 1.8955 33 1 10.0845 -0.1026 1.9678 34 1 14.0236 -1.9001 2.0837 35 1 14.3304 -0.6741 0.8299 36 1 13.6737 -0.1860 2.4107 37 1 10.2966 -1.2409 -0.4727 38 1 11.1649 -0.0769 -1.5647 39 1 4.7894 5.0230 0.7271 40 1 3.8354 5.3135 -1.9997 41 1 2.1650 6.0622 1.7925 42 1 3.4021 7.6778 0.4593 43 1 1.3276 4.5115 -0.0007 44 1 0.2119 2.3186 -0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:42 Heat of formation + Delta-G solvation = -122.379327 kcal Electronic energy + Delta-G solvation = -27221.070349 eV Core-core repulsion = 23107.524576 eV Total energy + Delta-G solvation = -4113.545773 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.87785 -41.26090 -40.25293 -39.59373 -38.30338 -37.30223 -36.90870 -34.39975 -32.28841 -31.43165 -29.61226 -28.35654 -27.74525 -26.81410 -26.11694 -25.07312 -23.50248 -22.49621 -21.77476 -21.07150 -19.95830 -18.60141 -18.31028 -18.04161 -17.68957 -17.56813 -17.17878 -16.81407 -16.69239 -16.52172 -16.25929 -16.14899 -15.90343 -15.54659 -15.20690 -15.12692 -14.96558 -14.51633 -14.46167 -13.88461 -13.65686 -13.52767 -13.39056 -13.32903 -13.16884 -12.80193 -12.50015 -12.27932 -12.24961 -12.19014 -12.01225 -11.90125 -11.86616 -11.63075 -11.06284 -10.52539 -10.35810 -10.21714 -9.70747 -9.10640 -5.03726 0.20280 0.29629 1.31589 1.34298 1.39342 1.64723 1.98581 2.24233 2.49762 2.57234 2.90623 3.35083 3.47211 3.52730 3.60210 3.72992 3.73985 3.82648 3.83843 3.91631 3.99982 4.08050 4.16047 4.25772 4.34359 4.39270 4.43840 4.46250 4.48562 4.51689 4.60920 4.66865 4.67752 4.79876 4.82017 4.89584 4.90329 4.96636 5.01822 5.23156 5.27360 5.36938 5.47877 6.10735 6.21075 6.34409 6.40099 6.86277 7.03715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.254 4.254 5 C 0.172 3.828 6 O -0.305 6.305 7 C 0.035 3.965 8 C 0.515 3.485 9 O -0.568 6.568 10 N -0.698 5.698 11 C 0.122 3.878 12 H 0.102 0.898 13 C -0.168 4.168 14 C 0.061 3.939 15 H 0.102 0.898 16 O -0.395 6.395 17 C 0.023 3.977 18 C -0.130 4.130 19 C -0.203 4.203 20 C -0.069 4.069 21 O -0.558 6.558 22 Si 0.796 3.204 23 C -0.031 4.031 24 C -0.237 4.237 25 H 0.115 0.885 26 H 0.068 0.932 27 H 0.071 0.929 28 H 0.151 0.849 29 H 0.123 0.877 30 H 0.121 0.879 31 H 0.421 0.579 32 H 0.067 0.933 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.053 0.947 36 H 0.045 0.955 37 H 0.107 0.893 38 H 0.092 0.908 39 H 0.080 0.920 40 H 0.391 0.609 41 H -0.280 1.280 42 H -0.304 1.304 43 H 0.167 0.833 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.042 -5.550 -1.779 7.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.273 4.273 5 C 0.126 3.874 6 O -0.218 6.218 7 C -0.043 4.043 8 C 0.301 3.699 9 O -0.446 6.446 10 N -0.351 5.351 11 C 0.017 3.983 12 H 0.120 0.880 13 C -0.207 4.207 14 C 0.003 3.997 15 H 0.120 0.880 16 O -0.314 6.314 17 C -0.073 4.073 18 C -0.168 4.168 19 C -0.204 4.204 20 C -0.177 4.177 21 O -0.365 6.365 22 Si 0.701 3.299 23 C -0.048 4.048 24 C -0.255 4.255 25 H 0.133 0.867 26 H 0.087 0.913 27 H 0.090 0.910 28 H 0.169 0.831 29 H 0.141 0.859 30 H 0.138 0.862 31 H 0.259 0.741 32 H 0.085 0.915 33 H 0.113 0.887 34 H 0.112 0.888 35 H 0.071 0.929 36 H 0.064 0.936 37 H 0.125 0.875 38 H 0.111 0.889 39 H 0.097 0.903 40 H 0.240 0.760 41 H -0.207 1.207 42 H -0.232 1.232 43 H 0.184 0.816 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -4.300 -4.318 -0.880 6.157 hybrid contribution 0.743 -0.621 0.439 1.063 sum -3.557 -4.939 -0.441 6.102 Atomic orbital electron populations 1.23411 0.75926 1.05698 1.02796 1.86056 1.23837 1.26597 1.87937 1.18880 0.91581 0.85108 0.92732 1.20549 0.93570 0.97321 1.15906 1.18637 0.81656 0.93349 0.93733 1.86219 1.15696 1.31636 1.88204 1.22727 0.88401 0.86521 1.06617 1.20508 0.88571 0.85218 0.75579 1.90770 1.80743 1.23215 1.49905 1.45614 1.05516 1.09547 1.74468 1.22181 0.78660 1.00015 0.97422 0.87979 1.24033 0.97633 1.01460 0.97583 1.23577 0.94033 0.88029 0.94099 0.88015 1.87898 1.31008 1.34762 1.77682 1.22964 0.82646 1.03113 0.98585 1.23555 0.95363 0.98897 0.98980 1.19751 0.93858 0.93992 1.12817 1.25150 1.04392 0.99724 0.88475 1.86543 1.39297 1.93702 1.16976 0.94114 0.80281 0.73003 0.82509 1.20867 0.91480 0.98642 0.93851 1.21453 1.01812 0.91133 1.11139 0.86659 0.91325 0.90999 0.83112 0.85930 0.86186 0.74070 0.91452 0.88715 0.88780 0.92886 0.93585 0.87489 0.88898 0.90262 0.75997 1.20692 1.23228 0.81585 0.82061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.29 10.49 -92.42 -0.97 -1.26 16 3 C 0.16 0.30 6.68 22.49 0.15 0.45 16 4 C -0.25 -0.75 8.97 22.46 0.20 -0.55 16 5 C 0.17 1.14 6.66 22.49 0.15 1.29 16 6 O -0.31 -3.02 8.99 -73.43 -0.66 -3.68 16 7 C 0.04 0.04 5.22 71.23 0.37 0.42 16 8 C 0.52 3.21 7.91 87.66 0.69 3.91 16 9 O -0.57 -10.09 16.12 16.00 0.26 -9.83 16 10 N -0.70 0.67 5.36 -440.03 -2.36 -1.69 16 11 C 0.12 0.07 4.21 45.52 0.19 0.26 16 12 H 0.10 0.48 7.50 -2.39 -0.02 0.46 16 13 C -0.17 -0.14 7.73 31.18 0.24 0.10 16 14 C 0.06 -0.03 4.31 31.18 0.13 0.10 16 15 H 0.10 -0.26 7.87 -2.39 -0.02 -0.28 16 16 O -0.39 -1.06 10.72 -148.98 -1.60 -2.66 16 17 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 18 C -0.13 0.39 7.66 31.12 0.24 0.63 16 19 C -0.20 -0.96 5.27 -19.75 -0.10 -1.07 16 20 C -0.07 -0.46 2.37 71.23 0.17 -0.29 16 21 O -0.56 -4.56 12.88 -148.98 -1.92 -6.48 16 22 Si 0.80 0.72 29.91 68.60 2.05 2.77 16 23 C -0.03 0.04 8.65 22.24 0.19 0.23 16 24 C -0.24 0.39 9.04 22.38 0.20 0.59 16 25 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 26 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 27 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 28 H 0.15 -0.18 6.30 -2.91 -0.02 -0.20 16 29 H 0.12 -0.56 7.65 -2.38 -0.02 -0.58 16 30 H 0.12 -0.53 7.67 -2.39 -0.02 -0.54 16 31 H 0.42 -3.41 8.71 -92.71 -0.81 -4.21 16 32 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 33 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 34 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 35 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 36 H 0.05 -0.11 8.14 -2.39 -0.02 -0.12 16 37 H 0.11 -0.49 8.11 -2.39 -0.02 -0.51 16 38 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.08 1.00 7.82 -2.39 -0.02 0.98 16 40 H 0.39 -0.75 8.70 -74.05 -0.64 -1.40 16 41 H -0.28 -1.29 7.11 99.48 0.71 -0.58 16 42 H -0.30 -2.74 7.11 99.48 0.71 -2.03 16 43 H 0.17 -1.29 5.12 -2.91 -0.01 -1.31 16 44 H 0.16 -1.20 6.29 -2.91 -0.02 -1.21 16 Total: 0.00 -28.82 368.09 -0.40 -29.21 By element: Atomic # 1 Polarization: -14.26 SS G_CDS: -0.37 Total: -14.63 kcal Atomic # 6 Polarization: 3.08 SS G_CDS: 5.17 Total: 8.26 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -2.36 Total: -1.69 kcal Atomic # 8 Polarization: -19.03 SS G_CDS: -4.89 Total: -23.92 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: 2.05 Total: 2.77 kcal Total: -28.82 -0.40 -29.21 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.168 kcal (2) G-P(sol) polarization free energy of solvation -28.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds