Wall clock time and date at job start Mon Mar 8 2021 04:11:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35996 * 116.99956 * 2 1 4 4 C 1.39154 * 120.07014 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07378 * 359.97438 * 4 3 2 6 6 C 1.42905 * 116.99762 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.46972 * 179.97438 * 6 5 4 8 8 O 1.21282 * 120.00041 * 359.97438 * 7 6 5 9 9 N 1.34779 * 120.00037 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00169 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.84403 * 23.80208 * 10 9 7 12 12 C 1.53771 * 113.61578 * 155.00365 * 10 9 7 13 13 C 1.53776 * 87.08429 * 139.98287 * 12 10 9 14 14 H 1.08998 * 113.62061 * 89.19705 * 13 12 10 15 15 O 1.42900 * 113.61621 * 220.02206 * 13 12 10 16 16 C 1.42900 * 114.00188 * 209.99786 * 15 13 12 17 17 C 1.53780 * 113.61396 * 252.50314 * 10 9 7 18 18 C 1.38566 * 119.84871 * 180.25301 * 4 3 2 19 19 C 1.38242 * 120.00183 * 359.42353 * 18 4 3 20 20 C 1.38252 * 120.14127 * 0.60005 * 19 18 4 21 21 C 1.50704 * 119.92428 * 179.70197 * 20 19 18 22 22 O 1.42901 * 109.46869 * 244.97631 * 21 20 19 23 23 Si 1.86306 * 109.47015 * 4.97316 * 21 20 19 24 24 C 1.38239 * 120.14893 * 359.67535 * 20 19 18 25 25 H 1.09004 * 109.46929 * 299.99512 * 1 2 3 26 26 H 1.08996 * 109.47412 * 60.00104 * 1 2 3 27 27 H 1.09002 * 109.47449 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.47054 * 299.99753 * 6 5 4 29 29 H 1.09000 * 109.47187 * 59.99808 * 6 5 4 30 30 H 0.96996 * 119.99844 * 0.02562 * 9 7 6 31 31 H 1.09005 * 113.61520 * 254.53369 * 12 10 9 32 32 H 1.09007 * 113.61562 * 25.34610 * 12 10 9 33 33 H 1.08998 * 109.46916 * 59.99858 * 16 15 13 34 34 H 1.09004 * 109.47339 * 179.97438 * 16 15 13 35 35 H 1.09002 * 109.46955 * 299.99586 * 16 15 13 36 36 H 1.09003 * 113.61738 * 334.56391 * 17 10 9 37 37 H 1.08989 * 113.61838 * 105.46831 * 17 10 9 38 38 H 1.08001 * 119.99561 * 179.72404 * 18 4 3 39 39 H 1.07997 * 119.92809 * 180.29994 * 19 18 4 40 40 H 1.09000 * 109.47647 * 124.97464 * 21 20 19 41 41 H 0.96697 * 113.99878 * 59.99934 * 22 21 20 42 42 H 1.48505 * 109.99553 * 58.68448 * 23 21 20 43 43 H 1.48501 * 110.00120 * 180.02562 * 23 21 20 44 44 H 1.07999 * 120.00021 * 180.02562 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0005 7 6 6.2519 -1.0582 0.0001 8 8 5.5669 -2.0592 0.0010 9 7 7.5957 -1.1613 -0.0003 10 6 8.2291 -2.4823 0.0009 11 1 7.5832 -3.2616 -0.4034 12 6 9.6467 -2.4862 -0.5950 13 6 10.0321 -3.4608 0.5303 14 1 9.8810 -4.5087 0.2713 15 8 11.3226 -3.2079 1.0895 16 6 11.9794 -4.3754 1.5872 17 6 8.8780 -2.8531 1.3449 18 6 4.0602 2.5233 0.0048 19 6 3.3029 3.6798 -0.0015 20 6 1.9224 3.6056 -0.0005 21 6 1.1016 4.8696 -0.0005 22 8 0.3651 4.9592 1.2208 23 14 2.2308 6.3434 -0.1542 24 6 1.2932 2.3747 0.0000 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3634 -1.0277 0.0005 28 1 5.9065 0.8504 -0.8906 29 1 5.9065 0.8504 0.8894 30 1 8.1434 -0.3608 -0.0006 31 1 9.7004 -2.9260 -1.5910 32 1 10.1501 -1.5216 -0.5306 33 1 12.1150 -5.0899 0.7753 34 1 12.9522 -4.0994 1.9943 35 1 11.3720 -4.8274 2.3714 36 1 9.1718 -1.9891 1.9410 37 1 8.3112 -3.5890 1.9151 38 1 5.1385 2.5839 0.0089 39 1 3.7907 4.6433 -0.0022 40 1 0.4090 4.8531 -0.8420 41 1 0.9186 4.9784 2.0134 42 1 3.0256 6.2459 -1.4049 43 1 1.4336 7.5962 -0.1548 44 1 0.2146 2.3196 0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:50 Heat of formation + Delta-G solvation = -116.504778 kcal Electronic energy + Delta-G solvation = -26911.684714 eV Core-core repulsion = 22798.393681 eV Total energy + Delta-G solvation = -4113.291033 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.80278 -41.21290 -40.05376 -39.09944 -38.82199 -37.27920 -36.88976 -34.29124 -32.02282 -31.45772 -29.69447 -28.43467 -27.80959 -26.85160 -26.24102 -24.96527 -23.44816 -22.51551 -21.67685 -21.07960 -19.77554 -18.61682 -18.29647 -18.15355 -17.84883 -17.51528 -17.06982 -16.88582 -16.61756 -16.25243 -16.15424 -16.09782 -15.82501 -15.64070 -15.35988 -15.15688 -14.96592 -14.58677 -14.23953 -13.75752 -13.70595 -13.60996 -13.57785 -13.34643 -12.85306 -12.63177 -12.51478 -12.26421 -12.25508 -12.13884 -12.10500 -11.97744 -11.92860 -11.75535 -10.85071 -10.54088 -10.46581 -10.13813 -9.78921 -8.84983 -5.06449 0.17704 0.29906 1.26469 1.43830 1.49448 1.61218 1.94939 2.32238 2.47846 2.57281 2.86812 3.32167 3.42029 3.44229 3.50565 3.64180 3.71473 3.76356 3.78276 3.81532 3.92963 3.94010 4.12372 4.22052 4.26059 4.29317 4.34095 4.39647 4.41399 4.48835 4.56867 4.61582 4.62777 4.65362 4.72005 4.83733 4.89245 4.96818 4.99878 5.09891 5.37088 5.38126 5.55706 5.96952 6.16388 6.34002 6.54352 6.55403 7.10942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.509 6.509 9 N -0.716 5.716 10 C 0.126 3.874 11 H 0.121 0.879 12 C -0.144 4.144 13 C 0.064 3.936 14 H 0.093 0.907 15 O -0.376 6.376 16 C 0.028 3.972 17 C -0.169 4.169 18 C -0.170 4.170 19 C -0.112 4.112 20 C -0.116 4.116 21 C -0.066 4.066 22 O -0.540 6.540 23 Si 0.689 3.311 24 C -0.146 4.146 25 H 0.057 0.943 26 H 0.055 0.945 27 H 0.103 0.897 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.404 0.596 31 H 0.083 0.917 32 H 0.098 0.902 33 H 0.044 0.956 34 H 0.087 0.913 35 H 0.043 0.957 36 H 0.095 0.905 37 H 0.077 0.923 38 H 0.140 0.860 39 H 0.132 0.868 40 H 0.113 0.887 41 H 0.379 0.621 42 H -0.257 1.257 43 H -0.255 1.255 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.673 2.024 1.296 5.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.302 3.698 8 O -0.382 6.382 9 N -0.369 5.369 10 C 0.021 3.979 11 H 0.139 0.861 12 C -0.182 4.182 13 C 0.005 3.995 14 H 0.111 0.889 15 O -0.294 6.294 16 C -0.068 4.068 17 C -0.208 4.208 18 C -0.188 4.188 19 C -0.130 4.130 20 C -0.116 4.116 21 C -0.177 4.177 22 O -0.346 6.346 23 Si 0.590 3.410 24 C -0.165 4.165 25 H 0.076 0.924 26 H 0.074 0.926 27 H 0.121 0.879 28 H 0.113 0.887 29 H 0.113 0.887 30 H 0.239 0.761 31 H 0.101 0.899 32 H 0.116 0.884 33 H 0.062 0.938 34 H 0.106 0.894 35 H 0.062 0.938 36 H 0.114 0.886 37 H 0.095 0.905 38 H 0.157 0.843 39 H 0.150 0.850 40 H 0.130 0.870 41 H 0.227 0.773 42 H -0.182 1.182 43 H -0.180 1.180 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.954 1.766 0.404 4.349 hybrid contribution -0.186 -0.070 -0.266 0.332 sum 3.768 1.697 0.138 4.134 Atomic orbital electron populations 1.23130 0.78129 1.04404 1.01359 1.86249 1.21324 1.25340 1.88544 1.18284 0.89029 0.85563 1.01039 1.18279 0.88302 0.85778 1.01786 1.86280 1.16056 1.27738 1.88851 1.22489 0.81274 0.96270 1.04039 1.20066 0.82521 0.90579 0.76658 1.90794 1.62622 1.38038 1.46795 1.45722 1.05842 1.09243 1.76125 1.22232 0.92740 0.85766 0.97136 0.86148 1.23630 0.94391 1.01344 0.98809 1.23448 0.83028 0.98702 0.94318 0.88877 1.87935 1.30505 1.32329 1.78620 1.22836 0.97722 0.88143 0.98098 1.24028 0.96778 1.02297 0.97665 1.20998 1.00490 0.90679 1.06659 1.20663 0.92738 0.97758 1.01839 1.20036 0.93712 0.95209 1.02669 1.25037 1.00792 1.01657 0.90188 1.86503 1.36375 1.96649 1.15046 0.94745 0.81785 0.76669 0.87753 1.20934 1.00372 0.90426 1.04756 0.92426 0.92628 0.87870 0.88747 0.88670 0.76118 0.89867 0.88380 0.93784 0.89437 0.93810 0.88621 0.90457 0.84253 0.85029 0.86988 0.77320 1.18181 1.17987 0.84228 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.35 10.28 -34.23 -0.35 -1.70 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.10 16 4 C 0.10 0.28 6.70 -39.12 -0.26 0.02 16 5 O -0.28 -1.10 9.45 -47.35 -0.45 -1.55 16 6 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 7 C 0.52 0.90 7.91 -10.99 -0.09 0.81 16 8 O -0.51 -3.52 16.10 -14.35 -0.23 -3.76 16 9 N -0.72 1.03 5.35 -53.02 -0.28 0.75 16 10 C 0.13 -0.10 4.24 -67.12 -0.28 -0.38 16 11 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 12 C -0.14 0.27 7.66 -25.93 -0.20 0.07 16 13 C 0.06 -0.05 4.31 -25.92 -0.11 -0.17 16 14 H 0.09 -0.18 7.87 -51.93 -0.41 -0.58 16 15 O -0.38 -0.35 10.71 -35.23 -0.38 -0.73 16 16 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 17 C -0.17 0.11 7.71 -25.92 -0.20 -0.09 16 18 C -0.17 0.06 9.04 -39.46 -0.36 -0.30 16 19 C -0.11 0.08 8.66 -39.57 -0.34 -0.26 16 20 C -0.12 -0.04 5.35 -104.61 -0.56 -0.60 16 21 C -0.07 0.02 2.80 36.01 0.10 0.12 16 22 O -0.54 -0.07 12.83 -35.23 -0.45 -0.52 16 23 Si 0.69 -0.95 29.80 -169.99 -5.06 -6.01 16 24 C -0.15 -0.24 8.67 -39.46 -0.34 -0.58 16 25 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 27 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.09 -0.32 7.67 -51.93 -0.40 -0.72 16 29 H 0.10 -0.33 7.65 -51.93 -0.40 -0.73 16 30 H 0.40 -1.86 8.73 -40.82 -0.36 -2.22 16 31 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 32 H 0.10 -0.23 8.12 -51.93 -0.42 -0.65 16 33 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 36 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 38 H 0.14 -0.49 6.30 -52.49 -0.33 -0.82 16 39 H 0.13 -0.41 4.89 -52.49 -0.26 -0.67 16 40 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 41 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 42 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 43 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 44 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 368.35 15.07 5.55 5.55 Total: 0.00 -11.20 368.35 -8.55 -19.75 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -6.26 Total: -12.76 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -0.63 Total: 0.98 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.28 Total: 0.75 kcal Atomic # 8 Polarization: -6.39 SS G_CDS: -1.86 Total: -8.25 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.06 Total: -6.01 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -11.20 -8.55 -19.75 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.758 kcal (2) G-P(sol) polarization free energy of solvation -11.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.546 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.747 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds