Wall clock time and date at job start Mon Mar 8 2021 04:11:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35996 * 116.99956 * 2 1 4 4 C 1.39154 * 120.07014 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07378 * 359.97438 * 4 3 2 6 6 C 1.42905 * 116.99762 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.46972 * 179.97438 * 6 5 4 8 8 O 1.21282 * 120.00041 * 359.97438 * 7 6 5 9 9 N 1.34779 * 120.00037 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00169 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.84403 * 23.80208 * 10 9 7 12 12 C 1.53771 * 113.61578 * 155.00365 * 10 9 7 13 13 C 1.53776 * 87.08429 * 139.98287 * 12 10 9 14 14 H 1.08998 * 113.62061 * 89.19705 * 13 12 10 15 15 O 1.42900 * 113.61621 * 220.02206 * 13 12 10 16 16 C 1.42900 * 114.00188 * 209.99786 * 15 13 12 17 17 C 1.53780 * 113.61396 * 252.50314 * 10 9 7 18 18 C 1.38566 * 119.84871 * 180.25301 * 4 3 2 19 19 C 1.38242 * 120.00183 * 359.42353 * 18 4 3 20 20 C 1.38252 * 120.14127 * 0.60005 * 19 18 4 21 21 C 1.50704 * 119.92428 * 179.70197 * 20 19 18 22 22 O 1.42901 * 109.46869 * 244.97631 * 21 20 19 23 23 Si 1.86306 * 109.47015 * 4.97316 * 21 20 19 24 24 C 1.38239 * 120.14893 * 359.67535 * 20 19 18 25 25 H 1.09004 * 109.46929 * 299.99512 * 1 2 3 26 26 H 1.08996 * 109.47412 * 60.00104 * 1 2 3 27 27 H 1.09002 * 109.47449 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.47054 * 299.99753 * 6 5 4 29 29 H 1.09000 * 109.47187 * 59.99808 * 6 5 4 30 30 H 0.96996 * 119.99844 * 0.02562 * 9 7 6 31 31 H 1.09005 * 113.61520 * 254.53369 * 12 10 9 32 32 H 1.09007 * 113.61562 * 25.34610 * 12 10 9 33 33 H 1.08998 * 109.46916 * 59.99858 * 16 15 13 34 34 H 1.09004 * 109.47339 * 179.97438 * 16 15 13 35 35 H 1.09002 * 109.46955 * 299.99586 * 16 15 13 36 36 H 1.09003 * 113.61738 * 334.56391 * 17 10 9 37 37 H 1.08989 * 113.61838 * 105.46831 * 17 10 9 38 38 H 1.08001 * 119.99561 * 179.72404 * 18 4 3 39 39 H 1.07997 * 119.92809 * 180.29994 * 19 18 4 40 40 H 1.09000 * 109.47647 * 124.97464 * 21 20 19 41 41 H 0.96697 * 113.99878 * 59.99934 * 22 21 20 42 42 H 1.48505 * 109.99553 * 58.68448 * 23 21 20 43 43 H 1.48501 * 110.00120 * 180.02562 * 23 21 20 44 44 H 1.07999 * 120.00021 * 180.02562 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0005 7 6 6.2519 -1.0582 0.0001 8 8 5.5669 -2.0592 0.0010 9 7 7.5957 -1.1613 -0.0003 10 6 8.2291 -2.4823 0.0009 11 1 7.5832 -3.2616 -0.4034 12 6 9.6467 -2.4862 -0.5950 13 6 10.0321 -3.4608 0.5303 14 1 9.8810 -4.5087 0.2713 15 8 11.3226 -3.2079 1.0895 16 6 11.9794 -4.3754 1.5872 17 6 8.8780 -2.8531 1.3449 18 6 4.0602 2.5233 0.0048 19 6 3.3029 3.6798 -0.0015 20 6 1.9224 3.6056 -0.0005 21 6 1.1016 4.8696 -0.0005 22 8 0.3651 4.9592 1.2208 23 14 2.2308 6.3434 -0.1542 24 6 1.2932 2.3747 0.0000 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3634 -1.0277 0.0005 28 1 5.9065 0.8504 -0.8906 29 1 5.9065 0.8504 0.8894 30 1 8.1434 -0.3608 -0.0006 31 1 9.7004 -2.9260 -1.5910 32 1 10.1501 -1.5216 -0.5306 33 1 12.1150 -5.0899 0.7753 34 1 12.9522 -4.0994 1.9943 35 1 11.3720 -4.8274 2.3714 36 1 9.1718 -1.9891 1.9410 37 1 8.3112 -3.5890 1.9151 38 1 5.1385 2.5839 0.0089 39 1 3.7907 4.6433 -0.0022 40 1 0.4090 4.8531 -0.8420 41 1 0.9186 4.9784 2.0134 42 1 3.0256 6.2459 -1.4049 43 1 1.4336 7.5962 -0.1548 44 1 0.2146 2.3196 0.0003 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:49 Heat of formation + Delta-G solvation = -120.465253 kcal Electronic energy + Delta-G solvation = -26911.856453 eV Core-core repulsion = 22798.393681 eV Total energy + Delta-G solvation = -4113.462772 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.84265 -41.23542 -40.08451 -39.20308 -38.84616 -37.27832 -36.89612 -34.34660 -32.02526 -31.46302 -29.67250 -28.47241 -27.71662 -26.76605 -26.22945 -24.92014 -23.45487 -22.54125 -21.72193 -21.02016 -19.80456 -18.62263 -18.33833 -18.11861 -17.87727 -17.52544 -17.11838 -16.83555 -16.69627 -16.26702 -16.09694 -16.08135 -15.80106 -15.65309 -15.41359 -15.18721 -14.91693 -14.58726 -14.28787 -13.78115 -13.66593 -13.57646 -13.47628 -13.35312 -12.77167 -12.63702 -12.54415 -12.21445 -12.19484 -12.14083 -12.11067 -11.97606 -11.86173 -11.75353 -10.99202 -10.48593 -10.43006 -10.15618 -9.79679 -8.91922 -4.96591 0.16314 0.27614 1.33913 1.42010 1.47002 1.68203 2.00598 2.30276 2.51997 2.55899 2.94661 3.40602 3.49558 3.51755 3.57050 3.70214 3.78827 3.85511 3.87673 3.92302 4.04750 4.12095 4.13814 4.27891 4.29219 4.30291 4.35564 4.49727 4.51441 4.54641 4.63629 4.64873 4.71840 4.72405 4.85488 4.94186 4.94810 5.00216 5.01288 5.12188 5.36931 5.42566 5.59316 5.96216 6.24391 6.40408 6.53540 6.78229 7.11798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.034 3.966 7 C 0.513 3.487 8 O -0.573 6.573 9 N -0.697 5.697 10 C 0.122 3.878 11 H 0.101 0.899 12 C -0.131 4.131 13 C 0.060 3.940 14 H 0.100 0.900 15 O -0.394 6.394 16 C 0.023 3.977 17 C -0.167 4.167 18 C -0.159 4.159 19 C -0.108 4.108 20 C -0.120 4.120 21 C -0.076 4.076 22 O -0.557 6.557 23 Si 0.787 3.213 24 C -0.153 4.153 25 H 0.064 0.936 26 H 0.062 0.938 27 H 0.111 0.889 28 H 0.128 0.872 29 H 0.130 0.870 30 H 0.422 0.578 31 H 0.090 0.910 32 H 0.108 0.892 33 H 0.051 0.949 34 H 0.094 0.906 35 H 0.046 0.954 36 H 0.097 0.903 37 H 0.066 0.934 38 H 0.177 0.823 39 H 0.161 0.839 40 H 0.103 0.897 41 H 0.396 0.604 42 H -0.280 1.280 43 H -0.303 1.303 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.486 3.791 1.351 7.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.039 3.961 5 O -0.228 6.228 6 C -0.043 4.043 7 C 0.300 3.700 8 O -0.451 6.451 9 N -0.351 5.351 10 C 0.017 3.983 11 H 0.119 0.881 12 C -0.169 4.169 13 C 0.001 3.999 14 H 0.118 0.882 15 O -0.313 6.313 16 C -0.073 4.073 17 C -0.206 4.206 18 C -0.178 4.178 19 C -0.125 4.125 20 C -0.120 4.120 21 C -0.186 4.186 22 O -0.366 6.366 23 Si 0.693 3.307 24 C -0.172 4.172 25 H 0.083 0.917 26 H 0.081 0.919 27 H 0.129 0.871 28 H 0.145 0.855 29 H 0.147 0.853 30 H 0.261 0.739 31 H 0.108 0.892 32 H 0.126 0.874 33 H 0.070 0.930 34 H 0.112 0.888 35 H 0.064 0.936 36 H 0.116 0.884 37 H 0.085 0.915 38 H 0.194 0.806 39 H 0.178 0.822 40 H 0.121 0.879 41 H 0.246 0.754 42 H -0.207 1.207 43 H -0.232 1.232 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 5.813 3.540 0.480 6.823 hybrid contribution -0.758 -0.595 -0.272 1.001 sum 5.055 2.945 0.209 5.854 Atomic orbital electron populations 1.23277 0.76859 1.05193 1.02051 1.86189 1.22954 1.26645 1.89107 1.18676 0.89952 0.85595 1.02747 1.18594 0.88166 0.86571 1.02745 1.86223 1.18231 1.29078 1.89305 1.22786 0.79321 0.95078 1.07134 1.20627 0.83046 0.90927 0.75434 1.90768 1.64109 1.40207 1.50065 1.45595 1.05144 1.09862 1.74476 1.22152 0.93050 0.85741 0.97370 0.88098 1.23563 0.92974 1.01614 0.98723 1.23553 0.82392 0.99419 0.94525 0.88196 1.87897 1.31083 1.33462 1.78884 1.22957 0.97966 0.87874 0.98501 1.23998 0.96851 1.02158 0.97562 1.21400 1.02331 0.89295 1.04727 1.21007 0.92214 0.98986 1.00339 1.20204 0.94552 0.94798 1.02477 1.25271 1.01022 1.02312 0.89956 1.86467 1.37530 1.96648 1.15911 0.93663 0.79209 0.72465 0.85408 1.21009 1.00462 0.90624 1.05066 0.91708 0.91918 0.87078 0.85453 0.85261 0.73908 0.89169 0.87357 0.93012 0.88792 0.93550 0.88448 0.91478 0.80568 0.82169 0.87948 0.75444 1.20669 1.23167 0.84254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.06 9.81 113.37 1.11 1.17 16 2 O -0.33 -3.85 10.28 -79.64 -0.82 -4.67 16 3 C 0.08 0.64 6.70 22.57 0.15 0.79 16 4 C 0.08 0.48 6.70 22.57 0.15 0.63 16 5 O -0.31 -2.75 9.45 -67.08 -0.63 -3.38 16 6 C 0.03 -0.08 5.22 71.24 0.37 0.29 16 7 C 0.51 2.01 7.91 87.66 0.69 2.70 16 8 O -0.57 -9.30 16.10 16.00 0.26 -9.04 16 9 N -0.70 2.33 5.35 -440.05 -2.36 -0.03 16 10 C 0.12 -0.13 4.24 45.51 0.19 0.06 16 11 H 0.10 0.34 7.46 -2.39 -0.02 0.32 16 12 C -0.13 0.57 7.66 31.12 0.24 0.81 16 13 C 0.06 -0.10 4.31 31.12 0.13 0.03 16 14 H 0.10 -0.35 7.87 -2.39 -0.02 -0.37 16 15 O -0.39 -0.60 10.71 -148.98 -1.60 -2.19 16 16 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 17 C -0.17 0.14 7.71 31.12 0.24 0.38 16 18 C -0.16 0.43 9.04 22.35 0.20 0.63 16 19 C -0.11 0.37 8.66 22.27 0.19 0.57 16 20 C -0.12 -0.03 5.35 -19.86 -0.11 -0.14 16 21 C -0.08 0.08 2.80 71.24 0.20 0.28 16 22 O -0.56 0.00 12.83 -148.98 -1.91 -1.91 16 23 Si 0.79 -3.18 29.80 68.60 2.04 -1.14 16 24 C -0.15 -0.64 8.67 22.35 0.19 -0.45 16 25 H 0.06 0.04 7.66 -2.38 -0.02 0.03 16 26 H 0.06 0.04 7.66 -2.39 -0.02 0.02 16 27 H 0.11 0.03 8.14 -2.39 -0.02 0.01 16 28 H 0.13 -1.19 7.67 -2.38 -0.02 -1.21 16 29 H 0.13 -1.24 7.65 -2.39 -0.02 -1.26 16 30 H 0.42 -4.67 8.73 -92.71 -0.81 -5.47 16 31 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 32 H 0.11 -0.67 8.12 -2.38 -0.02 -0.69 16 33 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 34 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 35 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.10 -0.12 8.14 -2.39 -0.02 -0.14 16 37 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 38 H 0.18 -1.95 6.30 -2.91 -0.02 -1.97 16 39 H 0.16 -1.55 4.89 -2.91 -0.01 -1.56 16 40 H 0.10 0.06 7.96 -2.39 -0.02 0.04 16 41 H 0.40 -3.23 8.70 -74.06 -0.64 -3.88 16 42 H -0.28 0.02 7.11 99.48 0.71 0.72 16 43 H -0.30 -1.25 7.11 99.48 0.71 -0.54 16 44 H 0.14 0.41 6.30 -2.91 -0.02 0.39 16 Total: 0.00 -30.08 368.35 -0.19 -30.28 By element: Atomic # 1 Polarization: -16.46 SS G_CDS: -0.37 Total: -16.84 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: 5.20 Total: 8.93 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -2.36 Total: -0.03 kcal Atomic # 8 Polarization: -16.49 SS G_CDS: -4.70 Total: -21.20 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.04 Total: -1.14 kcal Total: -30.08 -0.19 -30.28 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.189 kcal (2) G-P(sol) polarization free energy of solvation -30.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds