Wall clock time and date at job start Mon Mar 8 2021 04:12:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 114.00152 * 2 1 4 4 H 1.09008 * 112.85000 * 18.79904 * 3 2 1 5 5 C 1.53783 * 113.61778 * 149.99666 * 3 2 1 6 6 C 1.53786 * 87.07925 * 140.06571 * 5 3 2 7 7 H 1.08994 * 113.61460 * 89.20586 * 6 5 3 8 8 N 1.46499 * 113.60909 * 220.01825 * 6 5 3 9 9 C 1.34784 * 119.99893 * 203.47208 * 8 6 5 10 10 O 1.21691 * 119.99713 * 359.97438 * 9 8 6 11 11 C 1.46677 * 119.99881 * 179.72848 * 9 8 6 12 12 C 1.37873 * 126.23236 * 180.02562 * 11 9 8 13 13 C 1.39828 * 107.08767 * 179.97438 * 12 11 9 14 14 C 1.35460 * 107.86461 * 0.02562 * 13 12 11 15 15 C 1.50694 * 125.56607 * 179.97438 * 14 13 12 16 16 O 1.42904 * 109.47181 * 245.02593 * 15 14 13 17 17 Si 1.86302 * 109.46958 * 5.02527 * 15 14 13 18 18 N 1.35537 * 108.86864 * 359.72894 * 14 13 12 19 19 C 1.53777 * 87.17557 * 334.61080 * 6 5 3 20 20 H 1.08996 * 109.46743 * 179.97438 * 1 2 3 21 21 H 1.09000 * 109.47423 * 300.00505 * 1 2 3 22 22 H 1.09003 * 109.46812 * 60.00462 * 1 2 3 23 23 H 1.08996 * 113.61272 * 25.51719 * 5 3 2 24 24 H 1.08994 * 113.61382 * 254.61203 * 5 3 2 25 25 H 0.97005 * 120.00261 * 23.47420 * 8 6 5 26 26 H 1.08000 * 126.45671 * 0.03889 * 12 11 9 27 27 H 1.07997 * 126.06905 * 179.97438 * 13 12 11 28 28 H 1.08996 * 109.47555 * 125.02324 * 15 14 13 29 29 H 0.96707 * 113.99767 * 179.97438 * 16 15 14 30 30 H 1.48503 * 110.00229 * 178.68304 * 17 15 14 31 31 H 1.48503 * 110.00160 * 299.99599 * 17 15 14 32 32 H 0.97000 * 125.67810 * 180.28400 * 18 14 13 33 33 H 1.08999 * 113.61570 * 139.94182 * 19 6 5 34 34 H 1.09000 * 113.61420 * 270.84668 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3756 1.3719 0.7046 6 6 3.8220 2.3199 -0.4210 7 1 3.6222 3.3708 -0.2118 8 7 5.1929 2.0819 -0.8794 9 6 5.8831 3.0702 -1.4825 10 8 5.3672 4.1600 -1.6466 11 6 7.2577 2.8336 -1.9360 12 6 8.0774 3.7475 -2.5636 13 6 9.2926 3.1036 -2.8167 14 6 9.1960 1.8355 -2.3502 15 6 10.2807 0.7916 -2.4181 16 8 9.8595 -0.2786 -3.2662 17 14 11.8347 1.5547 -3.1063 18 7 7.9663 1.6605 -1.8076 19 6 2.7531 1.6533 -1.3029 20 1 -0.3633 -1.0276 -0.0005 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 3.9095 0.4217 0.7126 24 1 3.3381 1.8459 1.6854 25 1 5.6040 1.2130 -0.7489 26 1 7.8283 4.7686 -2.8119 27 1 10.1547 3.5396 -3.2993 28 1 10.4774 0.4065 -1.4176 29 1 10.5103 -0.9881 -3.3568 30 1 12.9214 0.5435 -3.1486 31 1 11.5798 2.0836 -4.4703 32 1 7.6394 0.8440 -1.3987 33 1 2.2138 2.3540 -1.9403 34 1 3.1165 0.7801 -1.8447 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_6580494.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:00 Heat of formation + Delta-G solvation = -34.406520 kcal Electronic energy + Delta-G solvation = -18298.049664 eV Core-core repulsion = 15199.558530 eV Total energy + Delta-G solvation = -3098.491134 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.46329 -41.00011 -39.51071 -37.90596 -37.26175 -34.31757 -32.08450 -31.43979 -28.00548 -27.07683 -26.82762 -24.97775 -22.85015 -21.56453 -21.36153 -20.84963 -19.44482 -18.74452 -18.25452 -16.98938 -16.86628 -16.43555 -16.18556 -15.99382 -15.86464 -15.18828 -14.88324 -14.85537 -14.62861 -14.09753 -13.81703 -13.58995 -13.51446 -13.46437 -12.85642 -12.75647 -12.25486 -12.21673 -11.99506 -11.92600 -11.09244 -10.73986 -10.54327 -10.15817 -10.02253 -9.21097 -4.99246 0.38894 1.10173 1.53536 1.58765 1.88462 1.97824 2.13969 2.40817 2.84328 3.12333 3.33374 3.45786 3.69068 3.72114 3.76257 3.85618 4.05515 4.22295 4.31715 4.38657 4.41021 4.46660 4.61112 4.62079 4.71508 4.83086 4.89940 4.96915 5.04689 5.14370 5.38604 5.66884 5.87059 6.16273 6.19859 6.26638 6.44887 7.13761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.144 4.144 6 C 0.126 3.874 7 H 0.122 0.878 8 N -0.720 5.720 9 C 0.593 3.407 10 O -0.524 6.524 11 C -0.052 4.052 12 C -0.096 4.096 13 C -0.197 4.197 14 C 0.070 3.930 15 C -0.063 4.063 16 O -0.541 6.541 17 Si 0.715 3.285 18 N -0.525 5.525 19 C -0.169 4.169 20 H 0.087 0.913 21 H 0.044 0.956 22 H 0.043 0.957 23 H 0.095 0.905 24 H 0.084 0.916 25 H 0.396 0.604 26 H 0.154 0.846 27 H 0.152 0.848 28 H 0.077 0.923 29 H 0.384 0.616 30 H -0.260 1.260 31 H -0.250 1.250 32 H 0.416 0.584 33 H 0.078 0.922 34 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.818 -2.402 3.269 4.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.182 4.182 6 C 0.021 3.979 7 H 0.140 0.860 8 N -0.371 5.371 9 C 0.381 3.619 10 O -0.399 6.399 11 C -0.165 4.165 12 C -0.123 4.123 13 C -0.221 4.221 14 C -0.048 4.048 15 C -0.172 4.172 16 O -0.349 6.349 17 Si 0.613 3.387 18 N -0.121 5.121 19 C -0.208 4.208 20 H 0.105 0.895 21 H 0.063 0.937 22 H 0.062 0.938 23 H 0.114 0.886 24 H 0.102 0.898 25 H 0.230 0.770 26 H 0.172 0.828 27 H 0.169 0.831 28 H 0.095 0.905 29 H 0.233 0.767 30 H -0.185 1.185 31 H -0.174 1.174 32 H 0.253 0.747 33 H 0.096 0.904 34 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 1.505 -1.539 2.549 3.336 hybrid contribution -0.439 -1.972 0.005 2.021 sum 1.065 -3.511 2.554 4.470 Atomic orbital electron populations 1.22836 0.80671 1.03085 1.00201 1.87934 1.20085 1.26851 1.94551 1.23483 0.93723 0.85836 0.96396 0.88819 1.23621 0.95790 1.00260 0.98529 1.22234 0.80060 1.00696 0.94878 0.86010 1.45801 1.15285 1.14789 1.61209 1.17073 0.83481 0.84229 0.77152 1.90865 1.69223 1.23866 1.55978 1.20419 0.94099 0.88264 1.13729 1.21317 0.92124 0.99395 0.99416 1.20678 0.99924 0.93430 1.08057 1.19841 0.86617 0.95689 1.02679 1.24600 1.04070 0.90398 0.98090 1.86589 1.46052 1.32756 1.69499 0.94307 0.73919 0.85924 0.84510 1.41918 1.11814 1.12234 1.46124 1.24057 0.97469 1.01443 0.97835 0.89457 0.93749 0.93803 0.88612 0.89772 0.77011 0.82804 0.83091 0.90504 0.76706 1.18462 1.17352 0.74713 0.90355 0.88821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.54 10.72 -35.23 -0.38 -0.92 16 3 C 0.06 -0.02 4.31 -25.82 -0.11 -0.13 16 4 H 0.09 -0.15 7.87 -51.92 -0.41 -0.56 16 5 C -0.14 0.19 7.66 -25.92 -0.20 -0.01 16 6 C 0.13 -0.01 4.21 -67.12 -0.28 -0.29 16 7 H 0.12 0.11 7.50 -51.93 -0.39 -0.28 16 8 N -0.72 -0.04 5.36 -54.32 -0.29 -0.33 16 9 C 0.59 1.83 7.79 -12.85 -0.10 1.73 16 10 O -0.52 -3.48 16.50 5.20 0.09 -3.40 16 11 C -0.05 -0.12 7.06 -81.98 -0.58 -0.69 16 12 C -0.10 -0.23 10.65 -39.12 -0.42 -0.65 16 13 C -0.20 -0.21 9.32 -39.98 -0.37 -0.59 16 14 C 0.07 0.04 6.50 -81.95 -0.53 -0.49 16 15 C -0.06 0.09 3.07 36.00 0.11 0.20 16 16 O -0.54 0.12 12.86 -35.23 -0.45 -0.33 16 17 Si 0.71 -1.46 30.56 -169.99 -5.19 -6.65 16 18 N -0.52 -0.05 5.99 -5.69 -0.03 -0.09 16 19 C -0.17 -0.02 7.73 -25.83 -0.20 -0.22 16 20 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 21 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.10 -0.14 8.11 -51.93 -0.42 -0.57 16 24 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 25 H 0.40 -0.96 7.84 -40.82 -0.32 -1.28 16 26 H 0.15 0.29 8.06 -52.49 -0.42 -0.13 16 27 H 0.15 -0.13 6.19 -52.49 -0.32 -0.46 16 28 H 0.08 -0.26 7.96 -51.93 -0.41 -0.68 16 29 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 30 H -0.26 0.06 7.11 56.52 0.40 0.46 16 31 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 32 H 0.42 -1.02 8.19 -40.82 -0.33 -1.35 16 33 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.09 0.07 8.14 -51.93 -0.42 -0.36 16 LS Contribution 294.66 15.07 4.44 4.44 Total: 0.00 -8.42 294.66 -7.78 -16.20 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -4.37 Total: -8.85 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -1.59 Total: -0.08 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.33 Total: -0.41 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.74 Total: -4.65 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.19 Total: -6.65 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -8.42 -7.78 -16.20 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_6580494.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.208 kcal (2) G-P(sol) polarization free energy of solvation -8.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.198 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds