Wall clock time and date at job start Mon Mar 8 2021 04:11:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 114.00152 * 2 1 4 4 H 1.09008 * 112.85000 * 18.79904 * 3 2 1 5 5 C 1.53783 * 113.61778 * 149.99666 * 3 2 1 6 6 C 1.53786 * 87.07925 * 140.06571 * 5 3 2 7 7 H 1.08994 * 113.61460 * 89.20586 * 6 5 3 8 8 N 1.46499 * 113.60909 * 220.01825 * 6 5 3 9 9 C 1.34784 * 119.99893 * 203.47208 * 8 6 5 10 10 O 1.21691 * 119.99713 * 359.97438 * 9 8 6 11 11 C 1.46677 * 119.99881 * 179.72848 * 9 8 6 12 12 C 1.37873 * 126.23236 * 180.02562 * 11 9 8 13 13 C 1.39828 * 107.08767 * 179.97438 * 12 11 9 14 14 C 1.35460 * 107.86461 * 0.02562 * 13 12 11 15 15 C 1.50694 * 125.56607 * 179.97438 * 14 13 12 16 16 O 1.42904 * 109.47181 * 245.02593 * 15 14 13 17 17 Si 1.86302 * 109.46958 * 5.02527 * 15 14 13 18 18 N 1.35537 * 108.86864 * 359.72894 * 14 13 12 19 19 C 1.53777 * 87.17557 * 334.61080 * 6 5 3 20 20 H 1.08996 * 109.46743 * 179.97438 * 1 2 3 21 21 H 1.09000 * 109.47423 * 300.00505 * 1 2 3 22 22 H 1.09003 * 109.46812 * 60.00462 * 1 2 3 23 23 H 1.08996 * 113.61272 * 25.51719 * 5 3 2 24 24 H 1.08994 * 113.61382 * 254.61203 * 5 3 2 25 25 H 0.97005 * 120.00261 * 23.47420 * 8 6 5 26 26 H 1.08000 * 126.45671 * 0.03889 * 12 11 9 27 27 H 1.07997 * 126.06905 * 179.97438 * 13 12 11 28 28 H 1.08996 * 109.47555 * 125.02324 * 15 14 13 29 29 H 0.96707 * 113.99767 * 179.97438 * 16 15 14 30 30 H 1.48503 * 110.00229 * 178.68304 * 17 15 14 31 31 H 1.48503 * 110.00160 * 299.99599 * 17 15 14 32 32 H 0.97000 * 125.67810 * 180.28400 * 18 14 13 33 33 H 1.08999 * 113.61570 * 139.94182 * 19 6 5 34 34 H 1.09000 * 113.61420 * 270.84668 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 0.3237 5 6 3.3756 1.3719 0.7046 6 6 3.8220 2.3199 -0.4210 7 1 3.6222 3.3708 -0.2118 8 7 5.1929 2.0819 -0.8794 9 6 5.8831 3.0702 -1.4825 10 8 5.3672 4.1600 -1.6466 11 6 7.2577 2.8336 -1.9360 12 6 8.0774 3.7475 -2.5636 13 6 9.2926 3.1036 -2.8167 14 6 9.1960 1.8355 -2.3502 15 6 10.2807 0.7916 -2.4181 16 8 9.8595 -0.2786 -3.2662 17 14 11.8347 1.5547 -3.1063 18 7 7.9663 1.6605 -1.8076 19 6 2.7531 1.6533 -1.3029 20 1 -0.3633 -1.0276 -0.0005 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8901 23 1 3.9095 0.4217 0.7126 24 1 3.3381 1.8459 1.6854 25 1 5.6040 1.2130 -0.7489 26 1 7.8283 4.7686 -2.8119 27 1 10.1547 3.5396 -3.2993 28 1 10.4774 0.4065 -1.4176 29 1 10.5103 -0.9881 -3.3568 30 1 12.9214 0.5435 -3.1486 31 1 11.5798 2.0836 -4.4703 32 1 7.6394 0.8440 -1.3987 33 1 2.2138 2.3540 -1.9403 34 1 3.1165 0.7801 -1.8447 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_6580494.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:11:59 Heat of formation + Delta-G solvation = -37.385956 kcal Electronic energy + Delta-G solvation = -18298.178862 eV Core-core repulsion = 15199.558530 eV Total energy + Delta-G solvation = -3098.620332 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.53946 -41.05297 -39.65034 -37.82655 -37.31863 -34.44555 -32.15466 -31.47724 -27.96154 -27.08650 -26.79311 -24.98310 -22.93779 -21.59912 -21.46154 -20.89371 -19.50814 -18.64302 -18.28049 -17.01903 -16.90746 -16.51889 -16.17839 -16.00556 -15.89030 -15.25191 -14.91984 -14.90099 -14.70201 -14.10274 -13.87102 -13.56500 -13.53733 -13.48540 -12.82029 -12.72625 -12.26131 -12.20110 -12.01174 -11.90549 -11.31111 -10.63622 -10.53078 -10.28099 -10.09499 -9.29576 -4.83356 0.25790 1.21311 1.50802 1.65797 1.88483 1.99268 2.16483 2.22743 2.88995 3.26948 3.35687 3.48136 3.71540 3.76436 3.79853 3.85755 4.18824 4.25502 4.27616 4.44382 4.49209 4.51948 4.65168 4.66227 4.81570 4.87691 4.89299 4.93842 4.96150 5.09150 5.34186 5.58918 5.76738 6.20424 6.25161 6.41557 6.53331 6.98220 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.063 3.937 4 H 0.106 0.894 5 C -0.132 4.132 6 C 0.123 3.877 7 H 0.111 0.889 8 N -0.705 5.705 9 C 0.591 3.409 10 O -0.568 6.568 11 C -0.066 4.066 12 C -0.115 4.115 13 C -0.208 4.208 14 C 0.069 3.931 15 C -0.067 4.067 16 O -0.562 6.562 17 Si 0.790 3.210 18 N -0.513 5.513 19 C -0.169 4.169 20 H 0.093 0.907 21 H 0.054 0.946 22 H 0.046 0.954 23 H 0.101 0.899 24 H 0.095 0.905 25 H 0.409 0.591 26 H 0.149 0.851 27 H 0.165 0.835 28 H 0.107 0.893 29 H 0.401 0.599 30 H -0.280 1.280 31 H -0.299 1.299 32 H 0.428 0.572 33 H 0.071 0.929 34 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.276 -3.557 4.221 5.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.004 3.996 4 H 0.124 0.876 5 C -0.170 4.170 6 C 0.018 3.982 7 H 0.129 0.871 8 N -0.356 5.356 9 C 0.380 3.620 10 O -0.447 6.447 11 C -0.179 4.179 12 C -0.142 4.142 13 C -0.232 4.232 14 C -0.050 4.050 15 C -0.175 4.175 16 O -0.373 6.373 17 Si 0.693 3.307 18 N -0.111 5.111 19 C -0.208 4.208 20 H 0.111 0.889 21 H 0.072 0.928 22 H 0.065 0.935 23 H 0.120 0.880 24 H 0.114 0.886 25 H 0.246 0.754 26 H 0.167 0.833 27 H 0.182 0.818 28 H 0.124 0.876 29 H 0.252 0.748 30 H -0.206 1.206 31 H -0.227 1.227 32 H 0.267 0.733 33 H 0.090 0.910 34 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.959 -2.758 3.543 4.899 hybrid contribution -0.568 -1.655 -0.354 1.785 sum 1.391 -4.413 3.190 5.620 Atomic orbital electron populations 1.22966 0.79764 1.03729 1.00845 1.87898 1.21244 1.27747 1.94645 1.23584 0.94320 0.85677 0.96008 0.87633 1.23558 0.94959 1.00051 0.98408 1.22240 0.79797 1.00505 0.95659 0.87116 1.45697 1.15184 1.14793 1.59925 1.17226 0.83824 0.84030 0.76900 1.90834 1.70229 1.25653 1.58026 1.20300 0.93947 0.89157 1.14532 1.21486 0.93063 0.99631 1.00042 1.20908 0.99995 0.93880 1.08388 1.20216 0.86991 0.96062 1.01689 1.24763 1.03034 0.90048 0.99678 1.86538 1.47346 1.33544 1.69849 0.93409 0.72173 0.83724 0.81395 1.41875 1.11479 1.12078 1.45626 1.24035 0.97666 1.01024 0.98125 0.88898 0.92751 0.93521 0.88028 0.88620 0.75428 0.83304 0.81768 0.87572 0.74755 1.20624 1.22681 0.73275 0.91038 0.89368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.04 10.72 -148.98 -1.60 -2.63 16 3 C 0.06 -0.06 4.31 31.18 0.13 0.08 16 4 H 0.11 -0.37 7.87 -2.38 -0.02 -0.39 16 5 C -0.13 0.42 7.66 31.12 0.24 0.66 16 6 C 0.12 0.04 4.21 45.52 0.19 0.24 16 7 H 0.11 0.34 7.50 -2.39 -0.02 0.32 16 8 N -0.71 -0.35 5.36 -444.00 -2.38 -2.73 16 9 C 0.59 4.39 7.79 86.45 0.67 5.06 16 10 O -0.57 -8.77 16.50 -4.32 -0.07 -8.84 16 11 C -0.07 -0.35 7.06 40.35 0.28 -0.06 16 12 C -0.12 -0.72 10.65 22.57 0.24 -0.48 16 13 C -0.21 -0.53 9.32 22.01 0.21 -0.32 16 14 C 0.07 0.04 6.50 41.34 0.27 0.31 16 15 C -0.07 0.28 3.07 71.23 0.22 0.50 16 16 O -0.56 0.94 12.86 -148.98 -1.92 -0.97 16 17 Si 0.79 -3.66 30.56 68.60 2.10 -1.57 16 18 N -0.51 0.08 5.99 -171.93 -1.03 -0.95 16 19 C -0.17 -0.15 7.73 31.18 0.24 0.09 16 20 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 21 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 22 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 23 H 0.10 -0.42 8.11 -2.39 -0.02 -0.44 16 24 H 0.10 -0.49 8.14 -2.39 -0.02 -0.50 16 25 H 0.41 -2.13 7.84 -92.70 -0.73 -2.86 16 26 H 0.15 0.92 8.06 -2.91 -0.02 0.90 16 27 H 0.17 -0.22 6.19 -2.91 -0.02 -0.24 16 28 H 0.11 -1.02 7.96 -2.39 -0.02 -1.04 16 29 H 0.40 -3.92 8.74 -74.05 -0.65 -4.57 16 30 H -0.28 0.35 7.11 99.48 0.71 1.05 16 31 H -0.30 -1.12 7.11 99.48 0.71 -0.41 16 32 H 0.43 -2.50 8.19 -92.71 -0.76 -3.26 16 33 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 34 H 0.09 0.17 8.14 -2.39 -0.02 0.15 16 Total: 0.00 -20.38 294.66 -1.92 -22.30 By element: Atomic # 1 Polarization: -10.92 SS G_CDS: -0.95 Total: -11.87 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: 3.93 Total: 7.26 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -3.41 Total: -3.68 kcal Atomic # 8 Polarization: -8.86 SS G_CDS: -3.58 Total: -12.45 kcal Atomic # 14 Polarization: -3.66 SS G_CDS: 2.10 Total: -1.57 kcal Total: -20.38 -1.92 -22.30 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_6580494.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.085 kcal (2) G-P(sol) polarization free energy of solvation -20.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.923 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds