Wall clock time and date at job start Mon Mar 8 2021 04:12:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35966 * 117.00256 * 2 1 4 4 C 1.39445 * 120.12257 * 179.97438 * 3 2 1 5 5 O 1.34777 * 133.24456 * 0.04230 * 4 3 2 6 6 C 1.34926 * 110.84165 * 179.97438 * 5 4 3 7 7 C 1.46998 * 125.13859 * 179.97438 * 6 5 4 8 8 O 1.21650 * 119.99920 * 180.02562 * 7 6 5 9 9 N 1.34780 * 119.99748 * 0.02562 * 7 6 5 10 10 C 1.46497 * 119.99653 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84935 * 334.66222 * 10 9 7 12 12 C 1.53786 * 113.61643 * 105.85894 * 10 9 7 13 13 C 1.54049 * 86.98426 * 140.01639 * 12 10 9 14 14 H 1.08996 * 113.68970 * 89.12734 * 13 12 10 15 15 O 1.42899 * 113.62058 * 220.02259 * 13 12 10 16 16 C 1.42907 * 114.00006 * 247.49984 * 15 13 12 17 17 C 1.53781 * 113.61305 * 203.46742 * 10 9 7 18 18 C 1.35810 * 109.71842 * 0.22225 * 6 5 4 19 19 C 1.40608 * 119.13421 * 179.97438 * 4 3 2 20 20 C 1.39772 * 120.12149 * 0.03697 * 19 4 3 21 21 C 1.50706 * 120.09512 * 179.97438 * 20 19 4 22 22 O 1.42893 * 109.47730 * 74.99452 * 21 20 19 23 23 Si 1.86304 * 109.47142 * 194.99765 * 21 20 19 24 24 C 1.36630 * 119.81356 * 359.97438 * 20 19 4 25 25 C 1.38260 * 120.11694 * 0.05966 * 3 2 1 26 26 H 1.08993 * 109.47029 * 60.00608 * 1 2 3 27 27 H 1.08998 * 109.47049 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46750 * 299.99935 * 1 2 3 29 29 H 0.96995 * 120.00200 * 359.97438 * 9 7 6 30 30 H 1.08992 * 113.61675 * 254.61383 * 12 10 9 31 31 H 1.09000 * 113.60973 * 25.51671 * 12 10 9 32 32 H 1.08996 * 109.46874 * 59.99756 * 16 15 13 33 33 H 1.08999 * 109.47160 * 180.02562 * 16 15 13 34 34 H 1.09004 * 109.46662 * 299.99626 * 16 15 13 35 35 H 1.08999 * 113.61567 * 334.48111 * 17 10 9 36 36 H 1.08998 * 113.61196 * 105.38466 * 17 10 9 37 37 H 1.08005 * 126.95117 * 179.76915 * 18 6 5 38 38 H 1.08998 * 109.46682 * 314.99238 * 21 20 19 39 39 H 0.96703 * 113.99877 * 59.99733 * 22 21 20 40 40 H 1.48493 * 109.99912 * 179.97438 * 23 21 20 41 41 H 1.48501 * 109.99868 * 301.31597 * 23 21 20 42 42 H 1.07999 * 119.75403 * 180.02562 * 24 20 19 43 43 H 1.08006 * 119.66421 * 359.94771 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2114 0.0000 4 6 3.4388 1.2873 0.0005 5 8 4.4142 0.3573 0.0004 6 6 5.6318 0.9386 0.0006 7 6 6.9132 0.2184 0.0010 8 8 7.9596 0.8388 0.0016 9 7 6.9287 -1.1293 0.0008 10 6 8.2058 -1.8471 0.0018 11 1 9.0200 -1.2630 -0.4272 12 6 8.5530 -2.4849 1.3574 13 6 9.0742 -3.6967 0.5618 14 1 10.1257 -3.6197 0.2854 15 8 8.7472 -4.9548 1.1553 16 6 9.8773 -5.6738 1.6535 17 6 8.1100 -3.2755 -0.5597 18 6 5.4944 2.2898 0.0058 19 6 4.0555 2.5510 0.0000 20 6 3.2766 3.7116 -0.0003 21 6 3.9382 5.0656 -0.0003 22 8 4.4610 5.3404 -1.3015 23 14 2.6863 6.3685 0.4538 24 6 1.9137 3.6151 -0.0006 25 6 1.2958 2.3726 0.0012 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 6.0944 -1.6240 0.0007 30 1 9.3311 -1.9523 1.9041 31 1 7.6803 -2.7082 1.9711 32 1 10.3788 -5.0787 2.4167 33 1 9.5455 -6.6170 2.0874 34 1 10.5697 -5.8741 0.8357 35 1 7.1165 -3.7146 -0.4691 36 1 8.5308 -3.3807 -1.5597 37 1 6.2875 3.0230 0.0107 38 1 4.7503 5.0731 0.7266 39 1 3.7925 5.3495 -2.0001 40 1 3.3265 7.7084 0.4579 41 1 1.5581 6.3471 -0.5115 42 1 1.3129 4.5125 -0.0013 43 1 0.2174 2.3120 0.0014 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_6672420.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:03 Heat of formation + Delta-G solvation = -75.220254 kcal Electronic energy + Delta-G solvation = -28361.411466 eV Core-core repulsion = 24148.996002 eV Total energy + Delta-G solvation = -4212.415464 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.134 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.65069 -41.26037 -40.63915 -39.68009 -39.11756 -37.30107 -37.08517 -34.28428 -33.54982 -31.90579 -30.94812 -28.75974 -27.88154 -26.83901 -26.44479 -25.84894 -23.94952 -23.91664 -21.94708 -21.64313 -21.13868 -19.67141 -18.98338 -18.55922 -18.27687 -17.77649 -17.65180 -17.02229 -16.87535 -16.65682 -16.42062 -16.23557 -16.14810 -15.87263 -15.57175 -15.28636 -15.06709 -14.64010 -14.60256 -14.45679 -14.06831 -13.56759 -13.52704 -13.45295 -13.44139 -13.31249 -12.83544 -12.62053 -12.34877 -12.27271 -12.21219 -12.13240 -11.91756 -11.67552 -11.33503 -10.93159 -10.60779 -10.51542 -10.19766 -9.75631 -8.98488 -4.99811 -0.57621 0.12789 0.72484 1.21636 1.31246 1.52369 1.91849 1.93711 2.05902 2.06374 2.41133 2.84691 3.23418 3.34723 3.41411 3.47426 3.51532 3.61389 3.73276 3.80090 3.84480 3.87962 4.02227 4.09522 4.09843 4.19005 4.24136 4.41289 4.43842 4.45765 4.47925 4.49089 4.63242 4.67254 4.74763 4.83308 4.85475 4.89835 4.91586 4.96836 5.08052 5.23983 5.29340 5.38420 5.65178 6.16283 6.19980 6.35935 6.39464 6.94797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.024 4.024 7 C 0.604 3.396 8 O -0.510 6.510 9 N -0.704 5.704 10 C 0.122 3.878 11 H 0.123 0.877 12 C -0.168 4.168 13 C 0.064 3.936 14 H 0.094 0.906 15 O -0.375 6.375 16 C 0.028 3.972 17 C -0.143 4.143 18 C -0.103 4.103 19 C -0.081 4.081 20 C -0.095 4.095 21 C -0.073 4.073 22 O -0.525 6.525 23 Si 0.692 3.308 24 C -0.096 4.096 25 C -0.178 4.178 26 H 0.060 0.940 27 H 0.105 0.895 28 H 0.061 0.939 29 H 0.410 0.590 30 H 0.078 0.922 31 H 0.096 0.904 32 H 0.043 0.957 33 H 0.087 0.913 34 H 0.043 0.957 35 H 0.099 0.901 36 H 0.084 0.916 37 H 0.175 0.825 38 H 0.119 0.881 39 H 0.375 0.625 40 H -0.255 1.255 41 H -0.258 1.258 42 H 0.140 0.860 43 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.248 -1.804 1.489 4.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.389 3.611 8 O -0.386 6.386 9 N -0.355 5.355 10 C 0.018 3.982 11 H 0.141 0.859 12 C -0.207 4.207 13 C 0.006 3.994 14 H 0.112 0.888 15 O -0.293 6.293 16 C -0.068 4.068 17 C -0.181 4.181 18 C -0.124 4.124 19 C -0.083 4.083 20 C -0.096 4.096 21 C -0.183 4.183 22 O -0.331 6.331 23 Si 0.593 3.407 24 C -0.114 4.114 25 C -0.197 4.197 26 H 0.078 0.922 27 H 0.124 0.876 28 H 0.080 0.920 29 H 0.246 0.754 30 H 0.097 0.903 31 H 0.115 0.885 32 H 0.062 0.938 33 H 0.106 0.894 34 H 0.062 0.938 35 H 0.117 0.883 36 H 0.103 0.897 37 H 0.192 0.808 38 H 0.137 0.863 39 H 0.223 0.777 40 H -0.180 1.180 41 H -0.183 1.183 42 H 0.158 0.842 43 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -3.490 -1.186 1.579 4.010 hybrid contribution -0.316 -0.323 -1.152 1.238 sum -3.806 -1.510 0.427 4.116 Atomic orbital electron populations 1.23191 0.77306 1.04773 1.01784 1.86178 1.22165 1.25680 1.88346 1.17748 0.86507 0.85891 0.99361 1.18779 0.87454 0.86975 1.07015 1.84054 1.12656 1.34717 1.76083 1.21967 0.83890 0.92602 1.08967 1.16649 0.85433 0.82202 0.76784 1.90915 1.30335 1.67464 1.49895 1.45824 1.10076 1.05618 1.73955 1.22333 0.86766 0.91589 0.97550 0.85931 1.24077 1.02750 0.96391 0.97497 1.23493 0.98527 0.83429 0.93972 0.88788 1.87946 1.32280 1.31688 1.77402 1.22837 0.89132 0.96706 0.98123 1.23626 1.01723 0.93839 0.98961 1.22750 0.94766 0.94312 1.00572 1.19403 0.92620 0.92047 1.04200 1.19399 0.92812 0.94320 1.03031 1.25031 1.06845 0.97945 0.88489 1.86639 1.37587 1.92647 1.16257 0.94885 0.77546 0.77868 0.90415 1.20585 0.93483 0.97800 0.99515 1.20967 1.00359 0.90528 1.07821 0.92161 0.87629 0.92016 0.75387 0.90284 0.88548 0.93807 0.89448 0.93786 0.88287 0.89708 0.80795 0.86347 0.77713 1.17983 1.18318 0.84248 0.83494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.47 10.50 -19.63 -0.21 -0.67 16 3 C 0.15 0.26 6.70 -39.12 -0.26 0.00 16 4 C 0.05 0.15 7.35 -38.24 -0.28 -0.13 16 5 O -0.17 -0.60 10.28 2.66 0.03 -0.58 16 6 C -0.02 -0.08 7.07 -36.90 -0.26 -0.34 16 7 C 0.60 2.04 7.80 -12.71 -0.10 1.94 16 8 O -0.51 -3.09 16.44 5.23 0.09 -3.01 16 9 N -0.70 -0.63 5.36 -54.22 -0.29 -0.92 16 10 C 0.12 0.01 4.21 -67.12 -0.28 -0.27 16 11 H 0.12 0.08 7.50 -51.93 -0.39 -0.31 16 12 C -0.17 0.00 7.73 -25.77 -0.20 -0.20 16 13 C 0.06 -0.02 4.32 -25.78 -0.11 -0.13 16 14 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 15 O -0.37 -0.58 10.72 -35.23 -0.38 -0.96 16 16 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 17 C -0.14 0.13 7.66 -25.92 -0.20 -0.07 16 18 C -0.10 -0.32 10.68 -37.23 -0.40 -0.71 16 19 C -0.08 -0.22 6.16 -105.21 -0.65 -0.86 16 20 C -0.09 -0.07 5.26 -104.63 -0.55 -0.62 16 21 C -0.07 0.00 2.70 36.01 0.10 0.10 16 22 O -0.53 -0.79 12.88 -35.23 -0.45 -1.24 16 23 Si 0.69 -0.97 30.25 -169.99 -5.14 -6.12 16 24 C -0.10 0.07 8.62 -39.97 -0.34 -0.28 16 25 C -0.18 0.10 9.03 -39.38 -0.36 -0.25 16 26 H 0.06 -0.23 7.66 -51.93 -0.40 -0.62 16 27 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 28 H 0.06 -0.24 7.66 -51.93 -0.40 -0.64 16 29 H 0.41 -0.21 8.43 -40.82 -0.34 -0.56 16 30 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 35 H 0.10 -0.08 8.11 -51.93 -0.42 -0.50 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 37 H 0.17 0.42 8.06 -52.48 -0.42 -0.01 16 38 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -0.55 8.70 45.56 0.40 -0.16 16 40 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 41 H -0.26 0.06 6.69 56.52 0.38 0.44 16 42 H 0.14 -0.37 4.81 -52.49 -0.25 -0.62 16 43 H 0.15 -0.49 6.26 -52.48 -0.33 -0.82 16 LS Contribution 366.18 15.07 5.52 5.52 Total: 0.00 -8.24 366.18 -8.20 -16.45 By element: Atomic # 1 Polarization: -3.09 SS G_CDS: -5.56 Total: -8.65 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -1.81 Total: 0.17 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.29 Total: -0.92 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -0.92 Total: -6.46 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.14 Total: -6.12 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -8.24 -8.20 -16.45 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_6672420.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.771 kcal (2) G-P(sol) polarization free energy of solvation -8.245 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.450 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds