Wall clock time and date at job start Mon Mar 8 2021 04:12:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42896 * 114.00409 * 2 1 4 4 H 1.09008 * 112.84659 * 341.19300 * 3 2 1 5 5 C 1.53775 * 113.69245 * 112.46457 * 3 2 1 6 6 C 1.53779 * 87.08438 * 139.99471 * 5 3 2 7 7 H 1.09002 * 113.61731 * 89.11293 * 6 5 3 8 8 N 1.46500 * 113.68825 * 220.00754 * 6 5 3 9 9 C 1.34778 * 119.99919 * 254.05902 * 8 6 5 10 10 O 1.21701 * 120.00048 * 0.02562 * 9 8 6 11 11 C 1.46584 * 119.99949 * 180.02562 * 9 8 6 12 12 C 1.36651 * 125.45631 * 179.71959 * 11 9 8 13 13 C 1.37473 * 113.29354 * 179.83944 * 12 11 9 14 14 C 1.50695 * 122.45025 * 180.17996 * 13 12 11 15 15 C 1.33822 * 115.10424 * 0.45369 * 13 12 11 16 16 C 1.50696 * 124.52602 * 179.77173 * 15 13 12 17 17 O 1.42903 * 109.46663 * 329.99874 * 16 15 13 18 18 Si 1.86301 * 109.47009 * 210.00112 * 16 15 13 19 19 S 1.70620 * 110.95216 * 359.74925 * 15 13 12 20 20 C 1.53777 * 113.61697 * 210.00061 * 3 2 1 21 21 H 1.08998 * 109.47668 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47186 * 300.00819 * 1 2 3 23 23 H 1.09008 * 109.46734 * 60.00133 * 1 2 3 24 24 H 1.08993 * 113.61636 * 25.43835 * 5 3 2 25 25 H 1.09008 * 113.61006 * 254.54078 * 5 3 2 26 26 H 0.96998 * 119.99853 * 74.06469 * 8 6 5 27 27 H 1.07993 * 123.34866 * 0.02562 * 12 11 9 28 28 H 1.09001 * 109.47605 * 270.29228 * 14 13 12 29 29 H 1.09008 * 109.47039 * 30.29407 * 14 13 12 30 30 H 1.08993 * 109.47603 * 150.29363 * 14 13 12 31 31 H 1.08993 * 109.47396 * 90.00046 * 16 15 13 32 32 H 0.96700 * 114.00222 * 300.00093 * 17 16 15 33 33 H 1.48507 * 109.99706 * 179.97438 * 18 16 15 34 34 H 1.48495 * 109.99984 * 301.31656 * 18 16 15 35 35 H 1.08997 * 113.61941 * 105.38035 * 20 3 2 36 36 H 1.09009 * 113.68972 * 334.49114 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 -0.3239 5 6 2.7532 1.6510 1.3013 6 6 3.8221 2.3198 0.4210 7 1 3.6209 3.3706 0.2123 8 7 5.1936 2.0830 0.8783 9 6 5.8831 3.0717 1.4810 10 8 5.3663 4.1612 1.6459 11 6 7.2556 2.8350 1.9381 12 6 8.0556 3.7553 2.5548 13 6 9.2977 3.2644 2.8808 14 6 10.3427 4.1024 3.5711 15 6 9.5130 1.9896 2.5351 16 6 10.7972 1.2420 2.7854 17 8 11.8935 2.1585 2.7652 18 14 11.0370 -0.0425 1.4575 19 16 8.1391 1.3236 1.7736 20 6 3.3755 1.3718 -0.7045 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3633 0.5139 0.8899 23 1 -0.3633 0.5139 -0.8901 24 1 3.1168 0.7771 1.8418 25 1 2.2132 2.3503 1.9397 26 1 5.6054 1.2146 0.7471 27 1 7.7422 4.7665 2.7678 28 1 10.9512 4.6124 2.8243 29 1 9.8543 4.8405 4.2076 30 1 10.9784 3.4607 4.1810 31 1 10.7497 0.7538 3.7588 32 1 11.9965 2.6301 1.9273 33 1 12.3006 -0.7864 1.6927 34 1 9.8878 -0.9829 1.4472 35 1 3.3382 1.8456 -1.6854 36 1 3.9105 0.4220 -0.7133 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_6739946.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:06 Heat of formation + Delta-G solvation = -50.429539 kcal Electronic energy + Delta-G solvation = -19847.802709 eV Core-core repulsion = 16619.431163 eV Total energy + Delta-G solvation = -3228.371546 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.091 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.38817 -40.25855 -39.56912 -37.45134 -37.15029 -34.40183 -32.05706 -30.21404 -27.95057 -26.93603 -26.71584 -25.02512 -23.90949 -21.89074 -21.17600 -20.11849 -19.35610 -18.36557 -17.50866 -17.34720 -16.84427 -16.53028 -16.42420 -16.22766 -15.89738 -15.58775 -15.20622 -14.89031 -14.57117 -14.44657 -13.95844 -13.57370 -13.50153 -13.47451 -13.10876 -12.96802 -12.79822 -12.45108 -12.31606 -12.20421 -12.14675 -11.88832 -11.77125 -11.26366 -10.67642 -10.51081 -10.26936 -9.69961 -9.44142 -5.07022 -0.69803 0.25144 0.67919 1.09610 1.31090 1.54217 1.89014 1.90385 2.01558 2.90342 3.36138 3.36847 3.49163 3.59589 3.69559 3.76629 3.86019 4.08595 4.25179 4.27891 4.44084 4.49457 4.53773 4.58937 4.67079 4.68080 4.79932 4.83484 4.89959 4.90701 4.92006 4.98703 5.01551 5.35469 5.38665 5.48045 6.22226 6.28584 6.66819 6.94644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.063 3.937 4 H 0.107 0.893 5 C -0.169 4.169 6 C 0.121 3.879 7 H 0.112 0.888 8 N -0.704 5.704 9 C 0.591 3.409 10 O -0.569 6.569 11 C -0.285 4.285 12 C -0.053 4.053 13 C -0.099 4.099 14 C -0.092 4.092 15 C -0.233 4.233 16 C -0.030 4.030 17 O -0.539 6.539 18 Si 0.729 3.271 19 S 0.232 5.768 20 C -0.133 4.133 21 H 0.092 0.908 22 H 0.046 0.954 23 H 0.054 0.946 24 H 0.089 0.911 25 H 0.072 0.928 26 H 0.410 0.590 27 H 0.148 0.852 28 H 0.085 0.915 29 H 0.060 0.940 30 H 0.080 0.920 31 H 0.122 0.878 32 H 0.396 0.604 33 H -0.273 1.273 34 H -0.256 1.256 35 H 0.096 0.904 36 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.722 -2.102 -3.670 4.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.005 3.995 4 H 0.124 0.876 5 C -0.208 4.208 6 C 0.017 3.983 7 H 0.130 0.870 8 N -0.354 5.354 9 C 0.379 3.621 10 O -0.450 6.450 11 C -0.405 4.405 12 C -0.087 4.087 13 C -0.112 4.112 14 C -0.150 4.150 15 C -0.353 4.353 16 C -0.143 4.143 17 O -0.347 6.347 18 Si 0.632 3.368 19 S 0.501 5.499 20 C -0.171 4.171 21 H 0.111 0.889 22 H 0.065 0.935 23 H 0.072 0.928 24 H 0.108 0.892 25 H 0.091 0.909 26 H 0.247 0.753 27 H 0.165 0.835 28 H 0.104 0.896 29 H 0.079 0.921 30 H 0.099 0.901 31 H 0.139 0.861 32 H 0.246 0.754 33 H -0.198 1.198 34 H -0.181 1.181 35 H 0.115 0.885 36 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 0.257 -4.032 -3.781 5.533 hybrid contribution -0.054 1.489 1.380 2.031 sum 0.203 -2.542 -2.402 3.503 Atomic orbital electron populations 1.22964 0.79780 1.03721 1.00835 1.87902 1.21224 1.27720 1.94643 1.23539 0.94272 0.85714 0.95989 0.87563 1.24009 0.97558 1.01093 0.98171 1.22277 0.79623 1.00587 0.95858 0.87002 1.45728 1.15184 1.14750 1.59754 1.17212 0.84088 0.83945 0.76855 1.90820 1.70566 1.25699 1.57909 1.24547 0.99414 1.01030 1.15485 1.20823 0.92296 1.00319 0.95299 1.18780 0.95993 0.94434 1.01950 1.20631 0.95891 0.98375 1.00145 1.24692 1.02923 0.99882 1.07797 1.24590 0.82098 0.98244 1.09355 1.86508 1.47217 1.58601 1.42349 0.93975 0.79867 0.77767 0.85219 1.82867 1.02881 1.10193 1.53996 1.23579 0.94995 1.00105 0.98448 0.88911 0.93500 0.92779 0.89224 0.90944 0.75323 0.83452 0.89608 0.92132 0.90148 0.86060 0.75352 1.19831 1.18118 0.88499 0.88007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.40 -1.00 10.72 -148.98 -1.60 -2.59 16 3 C 0.06 -0.06 4.31 31.12 0.13 0.07 16 4 H 0.11 -0.40 7.87 -2.38 -0.02 -0.42 16 5 C -0.17 -0.12 7.71 31.12 0.24 0.12 16 6 C 0.12 0.07 4.22 45.52 0.19 0.26 16 7 H 0.11 0.33 7.50 -2.39 -0.02 0.31 16 8 N -0.70 -1.01 5.36 -444.09 -2.38 -3.39 16 9 C 0.59 4.29 7.78 86.42 0.67 4.96 16 10 O -0.57 -8.50 16.46 -4.35 -0.07 -8.57 16 11 C -0.28 -1.14 6.45 24.08 0.16 -0.98 16 12 C -0.05 -0.22 9.80 21.72 0.21 0.00 16 13 C -0.10 -0.08 5.75 -21.05 -0.12 -0.20 16 14 C -0.09 0.15 8.67 71.23 0.62 0.76 16 15 C -0.23 0.29 5.53 24.68 0.14 0.42 16 16 C -0.03 0.10 2.76 71.23 0.20 0.30 16 17 O -0.54 2.02 9.85 -148.98 -1.47 0.56 16 18 Si 0.73 -3.35 31.32 68.60 2.15 -1.20 16 19 S 0.23 -0.37 19.79 -56.49 -1.12 -1.49 16 20 C -0.13 0.39 7.66 31.12 0.24 0.63 16 21 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 22 H 0.05 -0.14 8.14 -2.39 -0.02 -0.15 16 23 H 0.05 -0.23 8.14 -2.38 -0.02 -0.25 16 24 H 0.09 0.16 8.14 -2.39 -0.02 0.14 16 25 H 0.07 0.12 8.14 -2.38 -0.02 0.10 16 26 H 0.41 -1.26 7.83 -92.71 -0.73 -1.99 16 27 H 0.15 0.71 8.06 -2.91 -0.02 0.69 16 28 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 29 H 0.06 -0.07 8.13 -2.38 -0.02 -0.09 16 30 H 0.08 -0.03 6.41 -2.39 -0.02 -0.04 16 31 H 0.12 -0.33 7.96 -2.39 -0.02 -0.35 16 32 H 0.40 -4.27 8.66 -74.06 -0.64 -4.91 16 33 H -0.27 -0.54 7.11 99.48 0.71 0.16 16 34 H -0.26 0.38 7.09 99.48 0.71 1.08 16 35 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.10 -0.36 8.11 -2.38 -0.02 -0.38 16 Total: 0.00 -15.70 316.71 -0.80 -16.51 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -0.22 Total: -7.35 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: 3.90 Total: 7.53 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -2.38 Total: -3.39 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -3.14 Total: -10.61 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.15 Total: -1.20 kcal Atomic # 16 Polarization: -0.37 SS G_CDS: -1.12 Total: -1.49 kcal Total: -15.70 -0.80 -16.51 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_6739946.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.923 kcal (2) G-P(sol) polarization free energy of solvation -15.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds