Wall clock time and date at job start Mon Mar 8 2021 04:12:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42900 * 114.00356 * 2 1 4 4 H 1.09000 * 112.90779 * 341.24924 * 3 2 1 5 5 C 1.53779 * 113.61340 * 112.50076 * 3 2 1 6 6 C 1.53779 * 87.08287 * 139.98137 * 5 3 2 7 7 H 1.09003 * 113.69217 * 89.12246 * 6 5 3 8 8 N 1.46498 * 113.61523 * 220.01667 * 6 5 3 9 9 C 1.34774 * 119.99849 * 252.49470 * 8 6 5 10 10 O 1.21630 * 120.00464 * 0.02562 * 9 8 6 11 11 C 1.47194 * 119.99609 * 180.02562 * 9 8 6 12 12 C 1.36007 * 123.46146 * 0.02562 * 11 9 8 13 13 S 1.70452 * 110.81546 * 179.70519 * 12 11 9 14 14 C 1.75509 * 92.44289 * 0.35892 * 13 12 11 15 15 C 1.50694 * 124.70756 * 179.90503 * 14 13 12 16 16 O 1.42901 * 109.47118 * 244.69536 * 15 14 13 17 17 Si 1.86298 * 109.47775 * 4.69781 * 15 14 13 18 18 C 1.32763 * 110.57716 * 359.63965 * 14 13 12 19 19 C 1.53782 * 113.61433 * 209.99714 * 3 2 1 20 20 H 1.09004 * 109.46806 * 60.00059 * 1 2 3 21 21 H 1.08999 * 109.47392 * 179.97438 * 1 2 3 22 22 H 1.08998 * 109.47392 * 300.00199 * 1 2 3 23 23 H 1.08998 * 113.61613 * 25.43015 * 5 3 2 24 24 H 1.09005 * 113.61414 * 254.53265 * 5 3 2 25 25 H 0.97001 * 120.00009 * 72.49988 * 8 6 5 26 26 H 1.07998 * 124.59484 * 0.02562 * 12 11 9 27 27 H 1.09004 * 109.47407 * 124.69893 * 15 14 13 28 28 H 0.96708 * 114.00246 * 180.02562 * 16 15 14 29 29 H 1.48506 * 109.99834 * 300.00486 * 17 15 14 30 30 H 1.48502 * 110.00011 * 61.31751 * 17 15 14 31 31 H 1.07998 * 123.45939 * 180.24565 * 18 14 13 32 32 H 1.09001 * 113.61335 * 105.47076 * 19 3 2 33 33 H 1.09002 * 113.69021 * 334.57614 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3144 2.0798 -0.3227 5 6 2.7535 1.6488 1.3018 6 6 3.8228 2.3180 0.4223 7 1 3.6237 3.3693 0.2143 8 7 5.1935 2.0784 0.8805 9 6 5.8951 3.0743 1.4569 10 8 5.3902 4.1720 1.5972 11 6 7.2725 2.8337 1.9168 12 6 7.9054 1.6360 1.7949 13 16 9.4872 1.7200 2.4243 14 6 9.2986 3.4054 2.8760 15 6 10.3621 4.2391 3.5430 16 8 9.9228 4.6151 4.8498 17 14 11.9344 3.2489 3.6774 18 6 8.0910 3.8454 2.5434 19 6 3.3757 1.3717 -0.7045 20 1 -0.3633 0.5139 -0.8900 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3634 0.5138 0.8899 23 1 3.1166 0.7739 1.8411 24 1 2.2141 2.3476 1.9412 25 1 5.5962 1.2030 0.7690 26 1 7.4670 0.7530 1.3540 27 1 10.5466 5.1350 2.9500 28 1 10.5590 5.1552 5.3384 29 1 11.6962 2.0247 4.4836 30 1 12.4189 2.8788 2.3233 31 1 7.7550 4.8559 2.7233 32 1 3.3386 1.8469 -1.6847 33 1 3.9099 0.4217 -0.7145 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_6894386.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:09 Heat of formation + Delta-G solvation = -46.410063 kcal Electronic energy + Delta-G solvation = -17947.992640 eV Core-core repulsion = 14875.333010 eV Total energy + Delta-G solvation = -3072.659630 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.076 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.32465 -40.01231 -38.62635 -37.36931 -37.00932 -34.26185 -31.80078 -27.93467 -26.96725 -26.83654 -26.27106 -24.15806 -21.84611 -21.21567 -20.31703 -18.77241 -18.48199 -18.17994 -17.88739 -16.85356 -16.35244 -16.28472 -16.05843 -15.71559 -15.51364 -15.09461 -14.63370 -14.31103 -13.95323 -13.86174 -13.71217 -13.55346 -13.37584 -12.82350 -12.67179 -12.32879 -12.19924 -12.17750 -12.06531 -11.89538 -10.87888 -10.51846 -10.49168 -10.10417 -9.97249 -9.51399 -5.31248 -0.37522 0.35915 0.70974 0.90245 1.12715 1.51161 1.82085 2.05041 2.35013 2.86833 3.26208 3.38163 3.48797 3.62956 3.76078 3.79513 3.84670 3.98329 4.23656 4.26958 4.33412 4.42066 4.43465 4.64306 4.65502 4.70659 4.73465 4.86715 4.92392 4.98205 5.06523 5.21229 5.46981 6.18726 6.45006 6.51562 7.20514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.169 4.169 6 C 0.125 3.875 7 H 0.121 0.879 8 N -0.714 5.714 9 C 0.581 3.419 10 O -0.531 6.531 11 C -0.155 4.155 12 C -0.202 4.202 13 S 0.176 5.824 14 C -0.198 4.198 15 C -0.035 4.035 16 O -0.542 6.542 17 Si 0.671 3.329 18 C -0.049 4.049 19 C -0.144 4.144 20 H 0.044 0.956 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.094 0.906 24 H 0.077 0.923 25 H 0.401 0.599 26 H 0.172 0.828 27 H 0.085 0.915 28 H 0.385 0.615 29 H -0.234 1.234 30 H -0.239 1.239 31 H 0.159 0.841 32 H 0.083 0.917 33 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.847 -0.789 -0.581 3.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.112 0.888 5 C -0.208 4.208 6 C 0.020 3.980 7 H 0.139 0.861 8 N -0.365 5.365 9 C 0.367 3.633 10 O -0.408 6.408 11 C -0.174 4.174 12 C -0.340 4.340 13 S 0.442 5.558 14 C -0.314 4.314 15 C -0.148 4.148 16 O -0.349 6.349 17 Si 0.570 3.430 18 C -0.078 4.078 19 C -0.182 4.182 20 H 0.062 0.938 21 H 0.105 0.895 22 H 0.062 0.938 23 H 0.113 0.887 24 H 0.096 0.904 25 H 0.236 0.764 26 H 0.190 0.810 27 H 0.103 0.897 28 H 0.233 0.767 29 H -0.157 1.157 30 H -0.162 1.162 31 H 0.176 0.824 32 H 0.101 0.899 33 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 3.647 -2.330 -0.714 4.386 hybrid contribution -1.773 0.811 -0.417 1.994 sum 1.874 -1.519 -1.131 2.664 Atomic orbital electron populations 1.22833 0.80713 1.03070 1.00177 1.87937 1.20048 1.26859 1.94562 1.23450 0.93720 0.85820 0.96446 0.88845 1.24026 0.97449 1.01464 0.97835 1.22233 0.80206 1.00657 0.94887 0.86089 1.45742 1.14849 1.14096 1.61795 1.17603 0.84413 0.84195 0.77063 1.90813 1.70720 1.23710 1.55567 1.20236 0.96030 0.93757 1.07344 1.25810 1.00597 1.01721 1.05867 1.83187 1.10546 1.07130 1.54916 1.23419 0.99963 0.97802 1.10206 1.23997 1.02334 1.02017 0.86417 1.86527 1.47601 1.74506 1.26290 0.94717 0.81422 0.82496 0.84414 1.21039 0.90926 1.00439 0.95380 1.23631 0.95730 1.00357 0.98507 0.93784 0.89461 0.93815 0.88734 0.90444 0.76427 0.81020 0.89726 0.76690 1.15711 1.16230 0.82399 0.89856 0.88534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.63 10.71 -35.23 -0.38 -1.01 16 3 C 0.06 0.00 4.31 -25.92 -0.11 -0.11 16 4 H 0.09 -0.12 7.87 -51.93 -0.41 -0.53 16 5 C -0.17 -0.07 7.71 -25.92 -0.20 -0.27 16 6 C 0.13 0.06 4.24 -67.12 -0.28 -0.23 16 7 H 0.12 0.18 7.46 -51.93 -0.39 -0.20 16 8 N -0.71 -0.49 5.32 -54.16 -0.29 -0.78 16 9 C 0.58 2.18 7.79 -12.62 -0.10 2.08 16 10 O -0.53 -3.91 16.40 5.25 0.09 -3.82 16 11 C -0.16 -0.42 5.98 -104.63 -0.63 -1.05 16 12 C -0.20 -0.09 10.38 29.93 0.31 0.22 16 13 S 0.18 0.20 20.20 -107.50 -2.17 -1.98 16 14 C -0.20 -0.43 5.69 -36.19 -0.21 -0.64 16 15 C -0.03 0.01 2.93 36.00 0.11 0.11 16 16 O -0.54 -0.09 12.86 -35.23 -0.45 -0.55 16 17 Si 0.67 -1.08 30.92 -169.99 -5.26 -6.33 16 18 C -0.05 -0.16 9.95 -39.02 -0.39 -0.55 16 19 C -0.14 0.12 7.66 -25.92 -0.20 -0.08 16 20 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 21 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 0.08 8.14 -51.93 -0.42 -0.34 16 24 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 25 H 0.40 -0.74 7.22 -40.82 -0.29 -1.03 16 26 H 0.17 -0.47 7.01 -52.49 -0.37 -0.84 16 27 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.38 -1.96 8.74 45.56 0.40 -1.56 16 29 H -0.23 -0.28 7.11 56.52 0.40 0.12 16 30 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 31 H 0.16 0.57 8.06 -52.49 -0.42 0.14 16 32 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.10 -0.10 8.12 -51.93 -0.42 -0.53 16 LS Contribution 299.41 15.07 4.51 4.51 Total: 0.00 -8.24 299.41 -8.60 -16.84 By element: Atomic # 1 Polarization: -3.41 SS G_CDS: -4.05 Total: -7.46 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -0.60 Total: 0.57 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.29 Total: -0.78 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: -0.74 Total: -5.38 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.26 Total: -6.33 kcal Atomic # 16 Polarization: 0.20 SS G_CDS: -2.17 Total: -1.98 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -8.24 -8.60 -16.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_6894386.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.567 kcal (2) G-P(sol) polarization free energy of solvation -8.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.843 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds