Wall clock time and date at job start Mon Mar 8 2021 04:12:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42901 * 114.00172 * 2 1 4 4 H 1.09004 * 112.84754 * 341.19532 * 3 2 1 5 5 C 1.53778 * 113.61482 * 112.49678 * 3 2 1 6 6 C 1.53787 * 87.07748 * 139.98232 * 5 3 2 7 7 H 1.09004 * 113.68926 * 89.12980 * 6 5 3 8 8 N 1.46497 * 113.61503 * 220.01813 * 6 5 3 9 9 C 1.34778 * 120.00617 * 252.49991 * 8 6 5 10 10 O 1.21604 * 119.99120 * 0.02562 * 9 8 6 11 11 C 1.47518 * 120.00741 * 180.02562 * 9 8 6 12 12 C 1.36593 * 125.77473 * 180.02562 * 11 9 8 13 13 N 1.34818 * 106.84021 * 179.97438 * 12 11 9 14 14 C 1.46499 * 126.59197 * 179.97438 * 13 12 11 15 15 C 1.53000 * 109.46840 * 125.00117 * 14 13 12 16 16 O 1.42903 * 109.46726 * 179.97438 * 15 14 13 17 17 C 1.35925 * 116.99722 * 179.97438 * 16 15 14 18 18 C 1.38813 * 120.06174 * 179.97438 * 17 16 15 19 19 Cl 1.73605 * 120.03540 * 0.02746 * 18 17 16 20 20 C 1.38257 * 119.92998 * 180.02562 * 18 17 16 21 21 C 1.38248 * 120.03509 * 0.02562 * 20 18 17 22 22 C 1.50700 * 119.93623 * 180.02562 * 21 20 18 23 23 O 1.42907 * 109.47276 * 64.99826 * 22 21 20 24 24 Si 1.86305 * 109.47093 * 184.99756 * 22 21 20 25 25 C 1.38275 * 120.12333 * 359.97438 * 21 20 18 26 26 C 1.38153 * 120.07812 * 359.72864 * 25 21 20 27 27 N 1.40213 * 106.80957 * 0.22500 * 13 12 11 28 28 N 1.28764 * 108.36659 * 359.61276 * 27 13 12 29 29 C 1.53780 * 113.61471 * 210.00106 * 3 2 1 30 30 H 1.08997 * 109.47278 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.46927 * 299.99994 * 1 2 3 32 32 H 1.08998 * 109.46988 * 60.00167 * 1 2 3 33 33 H 1.08999 * 113.61448 * 25.44038 * 5 3 2 34 34 H 1.08997 * 113.62204 * 254.53107 * 5 3 2 35 35 H 0.96997 * 119.99780 * 72.49912 * 8 6 5 36 36 H 1.08004 * 126.57710 * 0.03194 * 12 11 9 37 37 H 1.09002 * 109.47391 * 4.99787 * 14 13 12 38 38 H 1.09001 * 109.46813 * 244.99843 * 14 13 12 39 39 H 1.09001 * 109.47194 * 299.99493 * 15 14 13 40 40 H 1.08992 * 109.47399 * 59.99666 * 15 14 13 41 41 H 1.07998 * 119.98331 * 179.97438 * 20 18 17 42 42 H 1.09002 * 109.47194 * 305.00029 * 22 21 20 43 43 H 0.96697 * 113.99479 * 179.97438 * 23 22 21 44 44 H 1.48499 * 110.00002 * 178.67736 * 24 22 21 45 45 H 1.48497 * 110.00179 * 300.00117 * 24 22 21 46 46 H 1.08002 * 119.96206 * 180.02562 * 25 21 20 47 47 H 1.07994 * 120.02252 * 180.29805 * 26 25 21 48 48 H 1.09001 * 113.61342 * 105.47238 * 29 3 2 49 49 H 1.08992 * 113.68929 * 334.57241 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7534 1.6489 1.3018 6 6 3.8227 2.3181 0.4222 7 1 3.6235 3.3694 0.2142 8 7 5.1934 2.0786 0.8804 9 6 5.8951 3.0746 1.4568 10 8 5.3901 4.1718 1.5970 11 6 7.2756 2.8336 1.9177 12 6 8.0900 3.7532 2.5150 13 7 9.2566 3.1302 2.7766 14 6 10.4372 3.7187 3.4139 15 6 10.8343 2.8767 4.6281 16 8 11.9862 3.4504 5.2494 17 6 12.4716 2.8196 6.3512 18 6 13.5885 3.3220 7.0046 19 17 14.3671 4.7576 6.4159 20 6 14.0802 2.6779 8.1248 21 6 13.4605 1.5344 8.5934 22 6 13.9980 0.8344 9.8149 23 8 13.8565 1.6866 10.9533 24 14 13.0455 -0.7417 10.0970 25 6 12.3478 1.0323 7.9439 26 6 11.8486 1.6755 6.8277 27 7 9.1248 1.8124 2.3161 28 7 7.9444 1.6717 1.8213 29 6 3.3756 1.3719 -0.7045 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 3.1166 0.7741 1.8410 34 1 2.2140 2.3477 1.9412 35 1 5.5960 1.2032 0.7688 36 1 7.8458 4.7817 2.7362 37 1 10.2080 4.7347 3.7355 38 1 11.2618 3.7405 2.7014 39 1 10.0096 2.8549 5.3406 40 1 11.0634 1.8608 4.3065 41 1 14.9494 3.0678 8.6336 42 1 15.0520 0.6002 9.6652 43 1 14.1823 1.2995 11.7773 44 1 13.5868 -1.4575 11.2802 45 1 11.6069 -0.4360 10.3025 46 1 11.8654 0.1390 8.3124 47 1 10.9767 1.2853 6.3240 48 1 3.3384 1.8471 -1.6848 49 1 3.9098 0.4219 -0.7146 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:11 Heat of formation + Delta-G solvation = 10.236620 kcal Electronic energy + Delta-G solvation = -34209.799445 eV Core-core repulsion = 29168.855339 eV Total energy + Delta-G solvation = -5040.944106 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.128 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -43.36647 -41.51168 -41.12139 -39.70028 -39.39683 -37.79939 -37.26671 -37.23818 -36.17398 -34.19207 -32.59405 -32.05231 -31.98462 -30.66731 -27.81943 -26.79885 -26.73204 -25.87947 -25.68944 -24.07993 -23.70729 -22.83914 -22.32748 -21.52280 -21.03035 -19.80003 -18.90540 -18.59446 -18.23018 -17.87819 -17.55351 -17.29023 -17.05174 -16.97617 -16.86968 -16.33118 -16.15214 -15.96577 -15.80547 -15.67814 -15.60850 -15.21005 -15.05707 -14.97615 -14.85299 -14.64121 -14.07840 -13.92364 -13.81082 -13.51046 -13.47393 -13.39388 -13.17305 -12.78818 -12.74951 -12.58838 -12.53488 -12.24120 -12.15993 -12.13134 -12.04904 -11.98420 -11.85206 -11.70518 -11.49196 -11.27703 -10.53346 -10.51971 -10.46467 -10.07030 -10.03589 -9.35465 -4.94352 -0.04897 0.01125 0.06195 0.51508 0.71587 1.04660 1.30458 1.58244 1.92719 1.94704 2.01972 2.13492 2.33486 2.91446 3.11030 3.21267 3.31932 3.43967 3.48817 3.54789 3.61748 3.68400 3.72734 3.81430 3.84495 3.87354 3.89857 3.97865 4.04333 4.07777 4.24013 4.30613 4.40264 4.43048 4.51064 4.53188 4.56446 4.61490 4.67139 4.73411 4.73939 4.81105 4.86866 4.95638 4.95756 4.96389 5.04196 5.21394 5.25032 5.43254 5.44010 5.99557 6.26854 6.34324 6.57015 6.78768 7.04533 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.398 6.398 3 C 0.062 3.938 4 H 0.108 0.892 5 C -0.167 4.167 6 C 0.123 3.877 7 H 0.117 0.883 8 N -0.696 5.696 9 C 0.608 3.392 10 O -0.566 6.566 11 C -0.124 4.124 12 C 0.119 3.881 13 N -0.350 5.350 14 C 0.124 3.876 15 C 0.045 3.955 16 O -0.304 6.304 17 C 0.137 3.863 18 C -0.081 4.081 19 Cl -0.060 7.060 20 C -0.053 4.053 21 C -0.105 4.105 22 C -0.081 4.081 23 O -0.558 6.558 24 Si 0.762 3.238 25 C -0.072 4.072 26 C -0.188 4.188 27 N -0.080 5.080 28 N -0.216 5.216 29 C -0.137 4.137 30 H 0.091 0.909 31 H 0.048 0.952 32 H 0.053 0.947 33 H 0.087 0.913 34 H 0.076 0.924 35 H 0.415 0.585 36 H 0.238 0.762 37 H 0.149 0.851 38 H 0.124 0.876 39 H 0.081 0.919 40 H 0.085 0.915 41 H 0.146 0.854 42 H 0.099 0.901 43 H 0.396 0.604 44 H -0.286 1.286 45 H -0.295 1.295 46 H 0.152 0.848 47 H 0.161 0.839 48 H 0.094 0.906 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.378 -1.976 -0.167 2.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.317 6.317 3 C 0.004 3.996 4 H 0.126 0.874 5 C -0.206 4.206 6 C 0.018 3.982 7 H 0.135 0.865 8 N -0.346 5.346 9 C 0.393 3.607 10 O -0.444 6.444 11 C -0.264 4.264 12 C -0.038 4.038 13 N -0.136 5.136 14 C 0.003 3.997 15 C -0.031 4.031 16 O -0.217 6.217 17 C 0.091 3.909 18 C -0.108 4.108 19 Cl -0.031 7.031 20 C -0.072 4.072 21 C -0.106 4.106 22 C -0.190 4.190 23 O -0.369 6.369 24 Si 0.668 3.332 25 C -0.090 4.090 26 C -0.207 4.207 27 N -0.061 5.061 28 N -0.090 5.090 29 C -0.175 4.175 30 H 0.110 0.890 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.106 0.894 34 H 0.095 0.905 35 H 0.252 0.748 36 H 0.254 0.746 37 H 0.167 0.833 38 H 0.142 0.858 39 H 0.099 0.901 40 H 0.103 0.897 41 H 0.163 0.837 42 H 0.117 0.883 43 H 0.247 0.753 44 H -0.213 1.213 45 H -0.223 1.223 46 H 0.169 0.831 47 H 0.178 0.822 48 H 0.112 0.888 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.259 -2.468 -0.266 2.496 hybrid contribution -0.004 1.301 1.307 1.844 sum 0.255 -1.167 1.041 1.584 Atomic orbital electron populations 1.22961 0.79793 1.03672 1.00858 1.87912 1.21237 1.27905 1.94667 1.23571 0.94189 0.85644 0.96198 0.87420 1.23984 0.97458 1.01112 0.98019 1.22289 0.79717 1.00608 0.95552 0.86505 1.45698 1.14726 1.14411 1.59787 1.16904 0.82986 0.84025 0.76763 1.90814 1.70754 1.24722 1.58129 1.21458 0.98464 0.91838 1.14614 1.23910 0.83931 1.01477 0.94471 1.50351 1.12408 1.09981 1.40823 1.21918 0.85182 0.98154 0.94421 1.22994 0.87329 0.98312 0.94464 1.85998 1.44807 1.51610 1.39249 1.18660 0.92583 0.92268 0.87409 1.20331 0.97172 0.94048 0.99288 1.98381 1.79879 1.36718 1.88117 1.20887 0.99880 0.93744 0.92667 1.19328 0.97213 0.96928 0.97129 1.24952 1.06828 1.02086 0.85122 1.86549 1.86638 1.44380 1.19306 0.94183 0.75944 0.76527 0.86594 1.21147 0.93979 0.99468 0.94405 1.21384 1.03265 0.96117 0.99944 1.81991 1.11941 0.95719 1.16413 1.74626 1.00269 1.22094 1.12020 1.23585 0.95156 1.00179 0.98570 0.89027 0.93371 0.92809 0.89445 0.90538 0.74772 0.74589 0.83341 0.85759 0.90084 0.89676 0.83653 0.88318 0.75316 1.21325 1.22270 0.83064 0.82202 0.88766 0.88507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.31 10.71 -148.98 -1.60 -2.91 16 3 C 0.06 -0.04 4.31 31.12 0.13 0.10 16 4 H 0.11 -0.42 7.87 -2.39 -0.02 -0.44 16 5 C -0.17 -0.07 7.71 31.12 0.24 0.17 16 6 C 0.12 0.04 4.24 45.52 0.19 0.23 16 7 H 0.12 0.18 7.46 -2.38 -0.02 0.16 16 8 N -0.70 -1.30 5.35 -443.19 -2.37 -3.67 16 9 C 0.61 3.18 7.82 86.69 0.68 3.85 16 10 O -0.57 -5.73 16.46 -4.04 -0.07 -5.80 16 11 C -0.12 -0.36 6.99 40.81 0.29 -0.07 16 12 C 0.12 -0.35 11.27 83.85 0.95 0.60 16 13 N -0.35 1.20 3.69 -347.09 -1.28 -0.09 16 14 C 0.12 -1.11 6.91 86.38 0.60 -0.52 16 15 C 0.05 -0.29 4.95 71.98 0.36 0.07 16 16 O -0.30 0.41 9.60 -92.71 -0.89 -0.48 16 17 C 0.14 0.14 6.68 22.52 0.15 0.29 16 18 C -0.08 -0.26 6.33 22.41 0.14 -0.12 16 19 Cl -0.06 -0.24 28.50 -2.72 -0.08 -0.32 16 20 C -0.05 -0.11 9.46 22.28 0.21 0.10 16 21 C -0.11 -0.04 5.38 -19.85 -0.11 -0.14 16 22 C -0.08 0.21 2.79 71.24 0.20 0.40 16 23 O -0.56 -0.32 12.81 -148.98 -1.91 -2.23 16 24 Si 0.76 -2.97 29.85 68.60 2.05 -0.93 16 25 C -0.07 0.11 8.66 22.26 0.19 0.30 16 26 C -0.19 0.34 9.04 22.36 0.20 0.54 16 27 N -0.08 -0.25 13.65 37.02 0.51 0.25 16 28 N -0.22 -1.05 12.04 -50.00 -0.60 -1.65 16 29 C -0.14 0.25 7.66 31.12 0.24 0.49 16 30 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.05 -0.14 8.14 -2.38 -0.02 -0.16 16 32 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.09 0.19 8.14 -2.39 -0.02 0.17 16 34 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 35 H 0.42 0.00 8.41 -92.71 -0.78 -0.78 16 36 H 0.24 -2.27 8.06 -2.91 -0.02 -2.29 16 37 H 0.15 -2.10 8.08 -2.39 -0.02 -2.12 16 38 H 0.12 -1.25 8.14 -2.39 -0.02 -1.27 16 39 H 0.08 -0.60 7.65 -2.39 -0.02 -0.61 16 40 H 0.09 -0.50 7.68 -2.39 -0.02 -0.52 16 41 H 0.15 0.12 8.06 -2.91 -0.02 0.09 16 42 H 0.10 -0.64 7.96 -2.39 -0.02 -0.66 16 43 H 0.40 -2.88 8.74 -74.06 -0.65 -3.53 16 44 H -0.29 -0.18 7.11 99.48 0.71 0.52 16 45 H -0.30 -0.85 7.04 99.48 0.70 -0.15 16 46 H 0.15 -0.80 4.86 -2.91 -0.01 -0.81 16 47 H 0.16 -0.99 6.30 -2.91 -0.02 -1.01 16 48 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 49 H 0.10 -0.12 8.12 -2.39 -0.02 -0.14 16 Total: 0.00 -24.04 434.12 -0.72 -24.76 By element: Atomic # 1 Polarization: -14.07 SS G_CDS: -0.37 Total: -14.43 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: 5.89 Total: 7.49 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -3.75 Total: -5.16 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -4.46 Total: -11.42 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.05 Total: -0.93 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -0.08 Total: -0.32 kcal Total: -24.04 -0.72 -24.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.999 kcal (2) G-P(sol) polarization free energy of solvation -24.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.762 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds