Wall clock time and date at job start Mon Mar 8 2021 04:12:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42895 * 113.99876 * 2 1 4 4 H 1.08999 * 112.84958 * 341.19816 * 3 2 1 5 5 C 1.53781 * 113.69234 * 112.46423 * 3 2 1 6 6 C 1.54049 * 87.08031 * 139.98721 * 5 3 2 7 7 H 1.09000 * 113.61076 * 89.06984 * 6 5 3 8 8 N 1.46494 * 113.69866 * 220.05561 * 6 5 3 9 9 C 1.34779 * 119.99525 * 252.42298 * 8 6 5 10 10 O 1.21281 * 120.00328 * 359.97438 * 9 8 6 11 11 C 1.50706 * 119.99749 * 179.97438 * 9 8 6 12 12 N 1.46492 * 109.47193 * 179.97438 * 11 9 8 13 13 C 1.36838 * 125.06465 * 265.02303 * 12 11 9 14 14 C 1.34235 * 109.93779 * 179.97438 * 13 12 11 15 15 C 1.50704 * 126.49939 * 179.97438 * 14 13 12 16 16 O 1.42908 * 109.46623 * 105.03076 * 15 14 13 17 17 Si 1.86302 * 109.46998 * 345.03686 * 15 14 13 18 18 C 1.46491 * 107.00304 * 0.02562 * 14 13 12 19 19 C 1.39585 * 134.04118 * 179.97438 * 18 14 13 20 20 C 1.36669 * 119.76709 * 179.23642 * 19 18 14 21 21 C 1.38795 * 120.52163 * 0.66210 * 20 19 18 22 22 C 1.37785 * 120.66933 * 359.57521 * 21 20 19 23 23 C 1.37689 * 125.06270 * 84.72228 * 12 11 9 24 24 C 1.53781 * 113.61457 * 209.99995 * 3 2 1 25 25 H 1.08999 * 109.47260 * 299.99442 * 1 2 3 26 26 H 1.09002 * 109.47321 * 60.00253 * 1 2 3 27 27 H 1.09011 * 109.46954 * 180.02562 * 1 2 3 28 28 H 1.09005 * 113.61471 * 254.54303 * 5 3 2 29 29 H 1.08996 * 113.61178 * 25.35646 * 5 3 2 30 30 H 0.97000 * 120.00537 * 72.42383 * 8 6 5 31 31 H 1.09001 * 109.46833 * 300.00001 * 11 9 8 32 32 H 1.09005 * 109.47003 * 59.99764 * 11 9 8 33 33 H 1.08001 * 125.02860 * 0.02960 * 13 12 11 34 34 H 1.09000 * 109.47608 * 225.02641 * 15 14 13 35 35 H 0.96700 * 114.00009 * 300.00604 * 16 15 14 36 36 H 1.48506 * 109.99657 * 179.97438 * 17 15 14 37 37 H 1.48494 * 109.99722 * 301.31104 * 17 15 14 38 38 H 1.08012 * 120.11710 * 359.97438 * 19 18 14 39 39 H 1.07998 * 119.73555 * 180.25913 * 20 19 18 40 40 H 1.07996 * 119.66308 * 179.55706 * 21 20 19 41 41 H 1.07993 * 120.11549 * 179.97438 * 22 21 20 42 42 H 1.09002 * 113.61445 * 334.48406 * 24 3 2 43 43 H 1.09002 * 113.61408 * 105.30136 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0788 -0.3237 5 6 2.7531 1.6511 1.3013 6 6 3.8238 2.3210 0.4194 7 1 3.6222 3.3715 0.2100 8 7 5.1955 2.0834 0.8758 9 6 5.8972 3.0812 1.4489 10 8 5.3934 4.1758 1.5863 11 6 7.3081 2.8367 1.9190 12 7 7.8494 4.0677 2.5001 13 6 8.6100 4.9858 1.8286 14 6 8.9413 5.9944 2.6501 15 6 9.7709 7.2021 2.2975 16 8 8.9195 8.3420 2.1633 17 14 10.6587 6.8973 0.6883 18 6 8.3447 5.6979 3.9548 19 6 8.3338 6.3517 5.1880 20 6 7.6522 5.8059 6.2393 21 6 6.9817 4.5993 6.0946 22 6 6.9836 3.9346 4.8877 23 6 7.6637 4.4760 3.8019 24 6 3.3755 1.3719 -0.7045 25 1 -0.3634 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0278 0.0005 28 1 2.2131 2.3504 1.9398 29 1 3.1155 0.7771 1.8425 30 1 5.5986 1.2081 0.7656 31 1 7.3087 2.0482 2.6715 32 1 7.9252 2.5326 1.0734 33 1 8.9000 4.9106 0.7910 34 1 10.5007 7.3847 3.0863 35 1 8.2438 8.2497 1.4777 36 1 11.4799 8.0814 0.3291 37 1 11.5233 5.6957 0.8050 38 1 8.8522 7.2917 5.3076 39 1 7.6406 6.3143 7.1921 40 1 6.4535 4.1770 6.9366 41 1 6.4593 2.9960 4.7852 42 1 3.9094 0.4216 -0.7125 43 1 3.3378 1.8445 -1.6860 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:20 Heat of formation + Delta-G solvation = -8.946447 kcal Electronic energy + Delta-G solvation = -26187.164377 eV Core-core repulsion = 22394.023616 eV Total energy + Delta-G solvation = -3793.140762 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.47800 -41.22388 -39.83461 -37.98551 -37.58876 -37.23007 -34.47558 -33.83323 -31.34814 -30.11180 -29.06839 -27.86641 -26.90456 -25.98833 -24.75281 -23.56434 -22.56183 -21.74667 -21.17171 -20.54160 -18.60481 -18.52878 -18.16612 -17.60283 -17.18821 -16.88336 -16.49215 -16.34770 -16.20712 -15.95271 -15.80255 -15.39488 -15.22722 -14.98531 -14.68391 -14.57717 -14.30600 -13.95068 -13.84688 -13.63568 -13.52528 -13.24181 -12.90334 -12.59823 -12.43955 -12.32697 -12.25952 -12.10319 -12.00193 -11.97983 -11.66716 -11.08241 -10.58877 -10.41073 -10.21023 -10.20043 -9.01577 -8.51971 -5.00616 0.28584 0.80119 1.36670 1.39456 1.41760 1.68727 1.74254 2.04138 2.08392 2.78801 3.12334 3.26889 3.37228 3.48840 3.51049 3.66365 3.68037 3.73838 3.77410 3.82486 3.86836 4.09478 4.17054 4.31995 4.35212 4.37652 4.38224 4.55897 4.57296 4.58567 4.68148 4.72041 4.78100 4.80138 4.83562 4.90258 4.91273 4.99459 5.26095 5.31568 5.65367 5.81580 5.87021 5.90708 6.11461 6.16812 6.32162 6.37566 6.78997 6.99231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.169 4.169 6 C 0.125 3.875 7 H 0.120 0.880 8 N -0.716 5.716 9 C 0.493 3.507 10 O -0.513 6.513 11 C 0.091 3.909 12 N -0.466 5.466 13 C 0.068 3.932 14 C -0.198 4.198 15 C -0.029 4.029 16 O -0.542 6.542 17 Si 0.683 3.317 18 C -0.087 4.087 19 C -0.066 4.066 20 C -0.146 4.146 21 C -0.097 4.097 22 C -0.128 4.128 23 C 0.109 3.891 24 C -0.143 4.143 25 H 0.043 0.957 26 H 0.044 0.956 27 H 0.087 0.913 28 H 0.076 0.924 29 H 0.094 0.906 30 H 0.404 0.596 31 H 0.118 0.882 32 H 0.124 0.876 33 H 0.171 0.829 34 H 0.110 0.890 35 H 0.377 0.623 36 H -0.254 1.254 37 H -0.256 1.256 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.114 0.886 42 H 0.097 0.903 43 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.968 -5.412 -3.847 6.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.208 4.208 6 C 0.020 3.980 7 H 0.137 0.863 8 N -0.368 5.368 9 C 0.277 3.723 10 O -0.387 6.387 11 C -0.035 4.035 12 N -0.150 5.150 13 C -0.056 4.056 14 C -0.205 4.205 15 C -0.141 4.141 16 O -0.347 6.347 17 Si 0.584 3.416 18 C -0.091 4.091 19 C -0.085 4.085 20 C -0.165 4.165 21 C -0.116 4.116 22 C -0.148 4.148 23 C 0.004 3.996 24 C -0.181 4.181 25 H 0.062 0.938 26 H 0.063 0.937 27 H 0.106 0.894 28 H 0.094 0.906 29 H 0.113 0.887 30 H 0.239 0.761 31 H 0.136 0.864 32 H 0.142 0.858 33 H 0.188 0.812 34 H 0.127 0.873 35 H 0.224 0.776 36 H -0.179 1.179 37 H -0.180 1.180 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.143 0.857 41 H 0.132 0.868 42 H 0.116 0.884 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.160 -4.883 -3.829 6.312 hybrid contribution -0.232 -0.461 0.562 0.762 sum -1.391 -5.344 -3.267 6.416 Atomic orbital electron populations 1.22840 0.80646 1.03122 1.00196 1.87935 1.20097 1.26789 1.94555 1.23437 0.93775 0.85873 0.96408 0.88922 1.24063 0.97460 1.01390 0.97846 1.22263 0.80216 1.00554 0.94964 0.86256 1.45863 1.14858 1.14149 1.61973 1.21047 0.88147 0.85018 0.78125 1.90810 1.70436 1.23669 1.53739 1.21600 0.93036 0.87217 1.01687 1.43206 1.44438 1.19051 1.08260 1.21508 0.96813 0.89903 0.97397 1.20645 1.07883 0.98687 0.93318 1.24333 0.95891 0.84455 1.09402 1.86491 1.48939 1.37670 1.61619 0.95247 0.83628 0.80626 0.82080 1.18947 1.01390 0.94839 0.93930 1.20311 0.98224 0.98989 0.90935 1.20672 0.99973 0.96769 0.99059 1.20823 0.99186 0.95257 0.96345 1.19955 1.02320 1.01054 0.91479 1.18165 1.00862 0.95682 0.84843 1.23621 0.95729 1.00323 0.98461 0.93822 0.93748 0.89412 0.90573 0.88717 0.76129 0.86445 0.85837 0.81201 0.87259 0.77561 1.17899 1.18041 0.85979 0.85943 0.85742 0.86758 0.88428 0.89890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.22 10.72 -35.23 -0.38 -0.60 16 3 C 0.06 -0.08 4.31 -25.92 -0.11 -0.19 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.17 0.20 7.73 -25.78 -0.20 0.00 16 6 C 0.13 -0.21 4.25 -66.98 -0.28 -0.50 16 7 H 0.12 -0.02 7.47 -51.93 -0.39 -0.41 16 8 N -0.72 1.98 5.36 -52.88 -0.28 1.70 16 9 C 0.49 -0.15 7.90 -10.98 -0.09 -0.24 16 10 O -0.51 -2.37 16.02 5.56 0.09 -2.28 16 11 C 0.09 -0.23 6.48 -5.20 -0.03 -0.27 16 12 N -0.47 -0.56 2.27 -115.71 -0.26 -0.83 16 13 C 0.07 0.05 9.89 -16.73 -0.17 -0.12 16 14 C -0.20 -0.50 5.58 -102.71 -0.57 -1.07 16 15 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 16 O -0.54 -1.31 12.88 -35.23 -0.45 -1.77 16 17 Si 0.68 -0.30 30.75 -169.99 -5.23 -5.53 16 18 C -0.09 -0.39 6.35 -105.14 -0.67 -1.05 16 19 C -0.07 -0.27 10.05 -39.65 -0.40 -0.66 16 20 C -0.15 -0.43 9.97 -39.94 -0.40 -0.83 16 21 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 22 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 23 C 0.11 0.39 6.80 -83.98 -0.57 -0.18 16 24 C -0.14 0.37 7.65 -25.92 -0.20 0.17 16 25 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 26 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.09 -0.19 8.14 -51.92 -0.42 -0.61 16 28 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.40 -2.28 8.73 -40.82 -0.36 -2.63 16 31 H 0.12 -0.52 8.14 -51.93 -0.42 -0.95 16 32 H 0.12 -0.74 8.12 -51.93 -0.42 -1.16 16 33 H 0.17 -0.50 6.35 -52.49 -0.33 -0.84 16 34 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 35 H 0.38 -0.40 8.70 45.56 0.40 -0.01 16 36 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 37 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 38 H 0.12 0.38 8.06 -52.48 -0.42 -0.04 16 39 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 40 H 0.12 0.04 8.06 -52.49 -0.42 -0.39 16 41 H 0.11 0.10 8.06 -52.49 -0.42 -0.32 16 42 H 0.10 -0.28 8.12 -51.93 -0.42 -0.70 16 43 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 365.61 15.07 5.51 5.51 Total: 0.00 -10.67 365.61 -10.47 -21.15 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -6.19 Total: -12.14 kcal Atomic # 6 Polarization: -1.94 SS G_CDS: -3.27 Total: -5.21 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -0.55 Total: 0.87 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.74 Total: -4.65 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -5.23 Total: -5.53 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -10.67 -10.47 -21.15 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.200 kcal (2) G-P(sol) polarization free energy of solvation -10.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.526 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds