Wall clock time and date at job start Mon Mar 8 2021 04:12:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42904 * 113.99889 * 2 1 4 4 H 1.09008 * 112.90497 * 341.24920 * 3 2 1 5 5 C 1.53775 * 113.61613 * 112.50424 * 3 2 1 6 6 C 1.53779 * 87.08438 * 139.98302 * 5 3 2 7 7 H 1.09002 * 113.61731 * 89.11293 * 6 5 3 8 8 N 1.46500 * 113.68825 * 220.00754 * 6 5 3 9 9 C 1.34778 * 119.99919 * 254.05902 * 8 6 5 10 10 O 1.21624 * 120.00204 * 0.02562 * 9 8 6 11 11 C 1.47266 * 119.99961 * 180.02562 * 9 8 6 12 12 C 1.36768 * 126.93947 * 179.71569 * 11 9 8 13 13 C 1.50696 * 125.80589 * 359.97083 * 12 11 9 14 14 N 1.34663 * 108.39282 * 179.83432 * 12 11 9 15 15 C 1.36449 * 110.29609 * 0.44210 * 14 12 11 16 16 C 1.50701 * 125.56921 * 179.74983 * 15 14 12 17 17 O 1.42899 * 109.47180 * 244.97346 * 16 15 14 18 18 Si 1.86308 * 109.47139 * 4.97584 * 16 15 14 19 19 C 1.34478 * 108.85670 * 359.72684 * 15 14 12 20 20 C 1.53777 * 113.61633 * 210.00190 * 3 2 1 21 21 H 1.08999 * 109.47180 * 300.00093 * 1 2 3 22 22 H 1.09002 * 109.47128 * 60.00058 * 1 2 3 23 23 H 1.09007 * 109.46983 * 180.02562 * 1 2 3 24 24 H 1.08993 * 113.61636 * 25.42666 * 5 3 2 25 25 H 1.09008 * 113.61006 * 254.52908 * 5 3 2 26 26 H 0.96998 * 119.99853 * 74.06469 * 8 6 5 27 27 H 1.09008 * 109.47125 * 90.00008 * 13 12 11 28 28 H 1.08996 * 109.47297 * 210.00490 * 13 12 11 29 29 H 1.09008 * 109.47000 * 330.00789 * 13 12 11 30 30 H 0.97005 * 124.85057 * 180.18814 * 14 12 11 31 31 H 1.09004 * 109.47219 * 124.97094 * 16 15 14 32 32 H 0.96702 * 113.99687 * 179.97438 * 17 16 15 33 33 H 1.48506 * 109.99855 * 178.68262 * 18 16 15 34 34 H 1.48500 * 109.99694 * 299.99809 * 18 16 15 35 35 H 1.08003 * 126.82982 * 180.02562 * 19 15 14 36 36 H 1.08997 * 113.61941 * 105.46445 * 20 3 2 37 37 H 1.09005 * 113.61136 * 334.56610 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3141 2.0798 -0.3228 5 6 2.7534 1.6489 1.3017 6 6 3.8226 2.3183 0.4222 7 1 3.6221 3.3695 0.2148 8 7 5.1940 2.0801 0.8790 9 6 5.8842 3.0676 1.4830 10 8 5.3684 4.1565 1.6492 11 6 7.2630 2.8283 1.9417 12 6 8.0899 3.7239 2.5620 13 6 7.7472 5.1515 2.9018 14 7 9.2615 3.1121 2.8203 15 6 9.2315 1.8236 2.3722 16 6 10.3610 0.8318 2.4791 17 8 10.8220 0.4920 1.1699 18 14 11.7588 1.5852 3.4536 19 6 8.0290 1.5834 1.8201 20 6 3.3754 1.3720 -0.7045 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 3.1165 0.7742 1.8410 25 1 2.2139 2.3478 1.9411 26 1 5.6053 1.2116 0.7467 27 1 7.3072 5.1922 3.8983 28 1 8.6527 5.7577 2.8794 29 1 7.0336 5.5370 2.1736 30 1 10.0197 3.5291 3.2586 31 1 10.0086 -0.0671 2.9849 32 1 11.5508 -0.1436 1.1622 33 1 12.8663 0.6057 3.5933 34 1 12.2482 2.8117 2.7743 35 1 7.6939 0.6577 1.3759 36 1 3.3383 1.8471 -1.6848 37 1 3.9087 0.4214 -0.7138 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9984030_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:23 Heat of formation + Delta-G solvation = -38.479010 kcal Electronic energy + Delta-G solvation = -20175.203496 eV Core-core repulsion = 16920.998147 eV Total energy + Delta-G solvation = -3254.205349 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -42.41324 -40.85053 -39.32183 -37.93778 -37.09357 -34.04309 -32.84998 -31.90228 -29.03216 -27.81513 -26.70141 -25.98575 -24.66703 -22.81731 -21.45524 -21.08955 -20.20873 -18.76096 -18.23054 -17.96865 -17.07995 -16.68282 -16.24400 -16.16404 -15.95992 -15.73640 -15.22755 -14.99346 -14.74424 -14.52371 -14.25811 -14.09937 -13.64972 -13.44590 -13.42443 -13.31165 -12.94611 -12.70236 -12.52933 -12.17054 -12.06595 -12.04837 -11.78455 -10.80033 -10.51687 -10.41393 -9.93374 -9.71818 -9.08102 -5.24799 0.83617 0.98599 1.26999 1.31918 1.68152 2.00799 2.42053 2.70742 3.00411 3.27921 3.52510 3.62116 3.65509 3.89332 3.90270 3.91524 4.15017 4.22416 4.29934 4.36104 4.48904 4.51980 4.56976 4.74614 4.75207 4.78997 4.81219 4.81733 4.99632 5.03187 5.07310 5.16677 5.33397 5.69842 5.78041 5.93437 6.25607 6.28167 6.40243 6.78230 7.54138 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.168 4.168 6 C 0.128 3.872 7 H 0.118 0.882 8 N -0.715 5.715 9 C 0.596 3.404 10 O -0.549 6.549 11 C -0.242 4.242 12 C 0.126 3.874 13 C -0.099 4.099 14 N -0.545 5.545 15 C 0.018 3.982 16 C -0.043 4.043 17 O -0.531 6.531 18 Si 0.667 3.333 19 C -0.126 4.126 20 C -0.144 4.144 21 H 0.043 0.957 22 H 0.043 0.957 23 H 0.086 0.914 24 H 0.094 0.906 25 H 0.075 0.925 26 H 0.402 0.598 27 H 0.083 0.917 28 H 0.066 0.934 29 H 0.104 0.896 30 H 0.414 0.586 31 H 0.089 0.911 32 H 0.383 0.617 33 H -0.249 1.249 34 H -0.251 1.251 35 H 0.146 0.854 36 H 0.081 0.919 37 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.268 -1.808 2.477 3.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.004 3.996 4 H 0.110 0.890 5 C -0.207 4.207 6 C 0.022 3.978 7 H 0.136 0.864 8 N -0.365 5.365 9 C 0.386 3.614 10 O -0.429 6.429 11 C -0.251 4.251 12 C 0.007 3.993 13 C -0.156 4.156 14 N -0.144 5.144 15 C -0.090 4.090 16 C -0.153 4.153 17 O -0.339 6.339 18 Si 0.567 3.433 19 C -0.151 4.151 20 C -0.183 4.183 21 H 0.061 0.939 22 H 0.061 0.939 23 H 0.105 0.895 24 H 0.112 0.888 25 H 0.094 0.906 26 H 0.237 0.763 27 H 0.101 0.899 28 H 0.085 0.915 29 H 0.122 0.878 30 H 0.253 0.747 31 H 0.107 0.893 32 H 0.231 0.769 33 H -0.173 1.173 34 H -0.175 1.175 35 H 0.164 0.836 36 H 0.099 0.901 37 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.522 -0.530 2.476 2.954 hybrid contribution 0.802 -1.037 -0.758 1.514 sum 2.323 -1.567 1.718 3.287 Atomic orbital electron populations 1.22819 0.80865 1.02977 1.00104 1.87939 1.19912 1.26989 1.94579 1.23474 0.93732 0.85657 0.96689 0.89010 1.24015 0.97540 1.01439 0.97700 1.22135 0.80729 1.00287 0.94611 0.86422 1.45655 1.14475 1.15370 1.61013 1.17331 0.84199 0.83556 0.76359 1.90740 1.70497 1.24306 1.57312 1.20076 0.95526 0.95350 1.14190 1.20385 0.85210 0.95418 0.98277 1.20654 1.02733 0.87983 1.04238 1.41660 1.14148 1.10388 1.48196 1.19088 0.96808 0.85414 1.07701 1.24002 1.01301 0.99845 0.90184 1.86619 1.55182 1.66315 1.25766 0.95587 0.79063 0.81889 0.86806 1.21760 0.92646 0.97711 1.02954 1.23623 0.95643 1.00488 0.98503 0.93878 0.93858 0.89542 0.88777 0.90645 0.76324 0.89894 0.91530 0.87771 0.74746 0.89338 0.76873 1.17318 1.17534 0.83613 0.90050 0.88541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.78 10.71 -35.23 -0.38 -1.16 16 3 C 0.06 0.03 4.31 -25.92 -0.11 -0.09 16 4 H 0.09 -0.08 7.87 -51.92 -0.41 -0.49 16 5 C -0.17 -0.13 7.71 -25.92 -0.20 -0.33 16 6 C 0.13 0.13 4.22 -67.12 -0.28 -0.16 16 7 H 0.12 0.23 7.50 -51.93 -0.39 -0.16 16 8 N -0.71 -1.04 5.36 -54.14 -0.29 -1.33 16 9 C 0.60 2.37 7.81 -12.59 -0.10 2.27 16 10 O -0.55 -3.63 14.43 5.26 0.08 -3.55 16 11 C -0.24 -0.72 6.29 -103.35 -0.65 -1.37 16 12 C 0.13 0.23 7.17 -81.88 -0.59 -0.36 16 13 C -0.10 -0.04 9.88 36.00 0.36 0.31 16 14 N -0.54 -0.08 5.41 -5.42 -0.03 -0.10 16 15 C 0.02 0.01 6.13 -81.87 -0.50 -0.49 16 16 C -0.04 0.05 2.97 36.01 0.11 0.16 16 17 O -0.53 -0.09 12.86 -35.23 -0.45 -0.54 16 18 Si 0.67 -1.57 30.96 -169.99 -5.26 -6.83 16 19 C -0.13 -0.20 10.45 -37.50 -0.39 -0.60 16 20 C -0.14 0.02 7.66 -25.92 -0.20 -0.18 16 21 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 24 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 25 H 0.07 0.07 8.14 -51.92 -0.42 -0.35 16 26 H 0.40 -0.17 7.84 -40.82 -0.32 -0.49 16 27 H 0.08 -0.03 8.14 -51.92 -0.42 -0.45 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.10 0.25 6.47 -51.92 -0.34 -0.09 16 30 H 0.41 -0.97 6.72 -40.82 -0.27 -1.25 16 31 H 0.09 -0.26 7.96 -51.93 -0.41 -0.68 16 32 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 33 H -0.25 0.07 7.11 56.52 0.40 0.47 16 34 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 35 H 0.15 -0.01 7.70 -52.48 -0.40 -0.42 16 36 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 37 H 0.10 -0.02 8.11 -51.93 -0.42 -0.44 16 LS Contribution 313.43 15.07 4.72 4.72 Total: 0.00 -8.26 313.43 -8.22 -16.49 By element: Atomic # 1 Polarization: -2.81 SS G_CDS: -5.15 Total: -7.96 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -1.46 Total: 0.27 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.32 Total: -1.44 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -0.75 Total: -5.25 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.26 Total: -6.83 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -8.26 -8.22 -16.49 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.993 kcal (2) G-P(sol) polarization free energy of solvation -8.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds