Wall clock time and date at job start Mon Mar 8 2021 04:12:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42904 * 113.99889 * 2 1 4 4 H 1.09008 * 112.90497 * 341.24920 * 3 2 1 5 5 C 1.53775 * 113.61613 * 112.50424 * 3 2 1 6 6 C 1.53779 * 87.08438 * 139.98302 * 5 3 2 7 7 H 1.09002 * 113.61731 * 89.11293 * 6 5 3 8 8 N 1.46500 * 113.68825 * 220.00754 * 6 5 3 9 9 C 1.34778 * 119.99919 * 254.05902 * 8 6 5 10 10 O 1.21624 * 120.00204 * 0.02562 * 9 8 6 11 11 C 1.47266 * 119.99961 * 180.02562 * 9 8 6 12 12 C 1.36768 * 126.93947 * 179.71569 * 11 9 8 13 13 C 1.50696 * 125.80589 * 359.97083 * 12 11 9 14 14 N 1.34663 * 108.39282 * 179.83432 * 12 11 9 15 15 C 1.36449 * 110.29609 * 0.44210 * 14 12 11 16 16 C 1.50701 * 125.56921 * 179.74983 * 15 14 12 17 17 O 1.42899 * 109.47180 * 244.97346 * 16 15 14 18 18 Si 1.86308 * 109.47139 * 4.97584 * 16 15 14 19 19 C 1.34478 * 108.85670 * 359.72684 * 15 14 12 20 20 C 1.53777 * 113.61633 * 210.00190 * 3 2 1 21 21 H 1.08999 * 109.47180 * 300.00093 * 1 2 3 22 22 H 1.09002 * 109.47128 * 60.00058 * 1 2 3 23 23 H 1.09007 * 109.46983 * 180.02562 * 1 2 3 24 24 H 1.08993 * 113.61636 * 25.42666 * 5 3 2 25 25 H 1.09008 * 113.61006 * 254.52908 * 5 3 2 26 26 H 0.96998 * 119.99853 * 74.06469 * 8 6 5 27 27 H 1.09008 * 109.47125 * 90.00008 * 13 12 11 28 28 H 1.08996 * 109.47297 * 210.00490 * 13 12 11 29 29 H 1.09008 * 109.47000 * 330.00789 * 13 12 11 30 30 H 0.97005 * 124.85057 * 180.18814 * 14 12 11 31 31 H 1.09004 * 109.47219 * 124.97094 * 16 15 14 32 32 H 0.96702 * 113.99687 * 179.97438 * 17 16 15 33 33 H 1.48506 * 109.99855 * 178.68262 * 18 16 15 34 34 H 1.48500 * 109.99694 * 299.99809 * 18 16 15 35 35 H 1.08003 * 126.82982 * 180.02562 * 19 15 14 36 36 H 1.08997 * 113.61941 * 105.46445 * 20 3 2 37 37 H 1.09005 * 113.61136 * 334.56610 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3141 2.0798 -0.3228 5 6 2.7534 1.6489 1.3017 6 6 3.8226 2.3183 0.4222 7 1 3.6221 3.3695 0.2148 8 7 5.1940 2.0801 0.8790 9 6 5.8842 3.0676 1.4830 10 8 5.3684 4.1565 1.6492 11 6 7.2630 2.8283 1.9417 12 6 8.0899 3.7239 2.5620 13 6 7.7472 5.1515 2.9018 14 7 9.2615 3.1121 2.8203 15 6 9.2315 1.8236 2.3722 16 6 10.3610 0.8318 2.4791 17 8 10.8220 0.4920 1.1699 18 14 11.7588 1.5852 3.4536 19 6 8.0290 1.5834 1.8201 20 6 3.3754 1.3720 -0.7045 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 3.1165 0.7742 1.8410 25 1 2.2139 2.3478 1.9411 26 1 5.6053 1.2116 0.7467 27 1 7.3072 5.1922 3.8983 28 1 8.6527 5.7577 2.8794 29 1 7.0336 5.5370 2.1736 30 1 10.0197 3.5291 3.2586 31 1 10.0086 -0.0671 2.9849 32 1 11.5508 -0.1436 1.1622 33 1 12.8663 0.6057 3.5933 34 1 12.2482 2.8117 2.7743 35 1 7.6939 0.6577 1.3759 36 1 3.3383 1.8471 -1.6848 37 1 3.9087 0.4214 -0.7138 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9984030_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:12:22 Heat of formation + Delta-G solvation = -40.227715 kcal Electronic energy + Delta-G solvation = -20175.279326 eV Core-core repulsion = 16920.998147 eV Total energy + Delta-G solvation = -3254.281179 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.48100 -40.96393 -39.50611 -37.87459 -37.20123 -34.22329 -32.90060 -31.98463 -29.02014 -27.80550 -26.75342 -26.06345 -24.70522 -22.92014 -21.50749 -21.21635 -20.31843 -18.69201 -18.30422 -18.01814 -17.17002 -16.77409 -16.33479 -16.21312 -15.99950 -15.76510 -15.28379 -15.09383 -14.80547 -14.55529 -14.41064 -14.06548 -13.70372 -13.47529 -13.45441 -13.38164 -12.92627 -12.72423 -12.54564 -12.17263 -12.11015 -12.08562 -11.82912 -10.94178 -10.54228 -10.46313 -10.12133 -9.81029 -9.16097 -5.06286 0.68064 1.10444 1.24721 1.46043 1.79663 1.99981 2.34010 2.49759 2.98591 3.40585 3.46882 3.57336 3.70136 3.83670 3.87829 3.89431 4.08885 4.20979 4.34267 4.43829 4.51155 4.54024 4.56014 4.72624 4.73570 4.74121 4.76238 4.86325 4.95729 4.98539 5.02006 5.08434 5.26521 5.57636 5.68633 5.85705 6.27119 6.38290 6.57081 6.64352 7.32567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.397 6.397 3 C 0.063 3.937 4 H 0.105 0.895 5 C -0.165 4.165 6 C 0.124 3.876 7 H 0.106 0.894 8 N -0.706 5.706 9 C 0.589 3.411 10 O -0.585 6.585 11 C -0.267 4.267 12 C 0.119 3.881 13 C -0.096 4.096 14 N -0.537 5.537 15 C 0.013 3.987 16 C -0.053 4.053 17 O -0.555 6.555 18 Si 0.752 3.248 19 C -0.138 4.138 20 C -0.135 4.135 21 H 0.047 0.953 22 H 0.052 0.948 23 H 0.093 0.907 24 H 0.089 0.911 25 H 0.071 0.929 26 H 0.411 0.589 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.082 0.918 30 H 0.425 0.575 31 H 0.111 0.889 32 H 0.399 0.601 33 H -0.275 1.275 34 H -0.291 1.291 35 H 0.158 0.842 36 H 0.090 0.910 37 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.746 -2.500 2.724 4.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.316 6.316 3 C 0.005 3.995 4 H 0.123 0.877 5 C -0.204 4.204 6 C 0.019 3.981 7 H 0.124 0.876 8 N -0.356 5.356 9 C 0.380 3.620 10 O -0.467 6.467 11 C -0.277 4.277 12 C 0.000 4.000 13 C -0.153 4.153 14 N -0.137 5.137 15 C -0.095 4.095 16 C -0.162 4.162 17 O -0.365 6.365 18 Si 0.655 3.345 19 C -0.162 4.162 20 C -0.173 4.173 21 H 0.066 0.934 22 H 0.071 0.929 23 H 0.111 0.889 24 H 0.107 0.893 25 H 0.090 0.910 26 H 0.248 0.752 27 H 0.108 0.892 28 H 0.106 0.894 29 H 0.100 0.900 30 H 0.266 0.734 31 H 0.129 0.871 32 H 0.250 0.750 33 H -0.200 1.200 34 H -0.218 1.218 35 H 0.175 0.825 36 H 0.109 0.891 37 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.998 -1.270 2.723 3.608 hybrid contribution 0.678 -0.847 -0.852 1.380 sum 2.676 -2.117 1.870 3.891 Atomic orbital electron populations 1.22960 0.79828 1.03699 1.00802 1.87904 1.21202 1.27793 1.94671 1.23550 0.94136 0.85575 0.96259 0.87744 1.23968 0.97530 1.01031 0.97914 1.22134 0.80525 0.99993 0.95443 0.87587 1.45610 1.14521 1.15335 1.60105 1.17601 0.84749 0.83411 0.76233 1.90712 1.71350 1.25653 1.58955 1.20195 0.95435 0.96567 1.15473 1.20594 0.85586 0.95861 0.98002 1.20625 1.03226 0.87603 1.03834 1.41668 1.14029 1.10244 1.47750 1.19467 0.97234 0.85797 1.06978 1.24285 1.01345 1.00501 0.90085 1.86566 1.56233 1.67149 1.26589 0.94594 0.76539 0.78271 0.85108 1.21967 0.92931 0.97790 1.03524 1.23567 0.95180 1.00181 0.98407 0.93431 0.92909 0.88893 0.89289 0.91042 0.75250 0.89188 0.89352 0.89957 0.73398 0.87102 0.74975 1.20037 1.21808 0.82466 0.89142 0.88298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 10.85 113.37 1.23 1.21 16 2 O -0.40 -1.64 10.71 -148.98 -1.60 -3.23 16 3 C 0.06 0.06 4.31 31.12 0.13 0.19 16 4 H 0.10 -0.19 7.87 -2.38 -0.02 -0.21 16 5 C -0.17 -0.40 7.71 31.12 0.24 -0.16 16 6 C 0.12 0.37 4.22 45.52 0.19 0.56 16 7 H 0.11 0.59 7.50 -2.39 -0.02 0.57 16 8 N -0.71 -2.84 5.36 -443.45 -2.38 -5.22 16 9 C 0.59 5.63 7.81 86.62 0.68 6.31 16 10 O -0.58 -9.01 14.43 -4.11 -0.06 -9.07 16 11 C -0.27 -1.85 6.29 -19.04 -0.12 -1.97 16 12 C 0.12 0.50 7.17 41.78 0.30 0.80 16 13 C -0.10 -0.15 9.88 71.23 0.70 0.55 16 14 N -0.54 -0.06 5.41 -171.08 -0.93 -0.98 16 15 C 0.01 0.02 6.13 40.98 0.25 0.27 16 16 C -0.05 0.18 2.97 71.24 0.21 0.39 16 17 O -0.55 0.20 12.86 -148.98 -1.92 -1.72 16 18 Si 0.75 -4.15 30.96 68.60 2.12 -2.02 16 19 C -0.14 -0.48 10.45 23.62 0.25 -0.23 16 20 C -0.14 0.03 7.66 31.12 0.24 0.26 16 21 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 22 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 23 H 0.09 -0.23 8.14 -2.38 -0.02 -0.25 16 24 H 0.09 0.31 8.14 -2.39 -0.02 0.29 16 25 H 0.07 0.22 8.14 -2.38 -0.02 0.20 16 26 H 0.41 -0.05 7.84 -92.71 -0.73 -0.77 16 27 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 28 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 29 H 0.08 0.55 6.47 -2.38 -0.02 0.53 16 30 H 0.42 -2.22 6.72 -92.70 -0.62 -2.84 16 31 H 0.11 -0.86 7.96 -2.38 -0.02 -0.88 16 32 H 0.40 -3.47 8.74 -74.06 -0.65 -4.11 16 33 H -0.27 0.35 7.11 99.48 0.71 1.05 16 34 H -0.29 -0.34 7.11 99.48 0.71 0.37 16 35 H 0.16 -0.02 7.70 -2.91 -0.02 -0.04 16 36 H 0.09 -0.17 8.14 -2.39 -0.02 -0.18 16 37 H 0.10 -0.05 8.11 -2.38 -0.02 -0.07 16 Total: 0.00 -19.76 313.43 -1.30 -21.06 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -0.85 Total: -6.99 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 4.30 Total: 8.19 kcal Atomic # 7 Polarization: -2.90 SS G_CDS: -3.30 Total: -6.20 kcal Atomic # 8 Polarization: -10.45 SS G_CDS: -3.57 Total: -14.02 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: 2.12 Total: -2.02 kcal Total: -19.76 -1.30 -21.06 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9984030_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.172 kcal (2) G-P(sol) polarization free energy of solvation -19.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.930 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds