Wall clock time and date at job start Mon Mar 8 2021 04:36:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35968 * 116.99988 * 2 1 4 4 C 1.39381 * 120.12214 * 179.97438 * 3 2 1 5 5 O 1.34838 * 133.24213 * 0.02562 * 4 3 2 6 6 C 1.34878 * 110.85253 * 179.97438 * 5 4 3 7 7 C 1.47035 * 125.13521 * 179.97438 * 6 5 4 8 8 N 1.32411 * 126.70625 * 359.69527 * 7 6 5 9 9 C 1.34112 * 105.52324 * 179.91168 * 8 7 6 10 10 C 1.50700 * 126.15771 * 180.12614 * 9 8 7 11 11 C 1.52997 * 109.47132 * 300.23752 * 10 9 8 12 12 C 1.52998 * 109.46950 * 60.23814 * 10 9 8 13 13 C 1.52997 * 109.47071 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46965 * 299.99614 * 13 12 10 15 15 H 1.09003 * 109.46955 * 179.97438 * 14 13 12 16 16 O 1.42895 * 109.47291 * 299.99895 * 14 13 12 17 17 C 1.52998 * 109.46911 * 60.00288 * 14 13 12 18 18 C 1.52997 * 109.47393 * 299.99849 * 17 14 13 19 19 N 1.30083 * 107.68168 * 0.34876 * 9 8 7 20 20 O 1.21274 * 110.55088 * 359.77776 * 19 9 8 21 21 C 1.35802 * 109.73140 * 0.02562 * 6 5 4 22 22 C 1.40587 * 119.14890 * 180.02562 * 4 3 2 23 23 C 1.39747 * 120.12524 * 0.02562 * 22 4 3 24 24 C 1.50702 * 120.08896 * 180.02562 * 23 22 4 25 25 O 1.42900 * 109.47102 * 284.99685 * 24 23 22 26 26 Si 1.86306 * 109.46698 * 165.00247 * 24 23 22 27 27 C 1.36661 * 119.81341 * 0.02562 * 23 22 4 28 28 C 1.38315 * 120.11600 * 0.02562 * 3 2 1 29 29 H 1.08998 * 109.47469 * 60.00002 * 1 2 3 30 30 H 1.09004 * 109.46846 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.46727 * 299.99383 * 1 2 3 32 32 H 1.09005 * 109.46962 * 59.99757 * 11 10 9 33 33 H 1.09003 * 109.47287 * 179.97438 * 11 10 9 34 34 H 1.08995 * 109.47226 * 300.00398 * 11 10 9 35 35 H 1.09001 * 109.47277 * 299.99735 * 12 10 9 36 36 H 1.08996 * 109.47357 * 59.99792 * 12 10 9 37 37 H 1.09008 * 109.47309 * 180.02562 * 13 12 10 38 38 H 1.08996 * 109.47332 * 59.99615 * 13 12 10 39 39 H 0.96691 * 114.00462 * 300.00070 * 16 14 13 40 40 H 1.09005 * 109.47038 * 179.97438 * 17 14 13 41 41 H 1.09009 * 109.47287 * 59.99723 * 17 14 13 42 42 H 1.09004 * 109.46851 * 300.00656 * 18 17 14 43 43 H 1.09000 * 109.47780 * 180.02562 * 18 17 14 44 44 H 1.07999 * 126.95602 * 180.02562 * 21 6 5 45 45 H 1.08995 * 109.46874 * 45.00238 * 24 23 22 46 46 H 0.96699 * 114.00201 * 300.00544 * 25 24 23 47 47 H 1.48497 * 109.99573 * 180.02562 * 26 24 23 48 48 H 1.48499 * 109.99711 * 301.31783 * 26 24 23 49 49 H 1.07999 * 119.75797 * 179.97438 * 27 23 22 50 50 H 1.07999 * 119.66612 * 359.69890 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4380 1.2874 0.0005 5 8 4.4139 0.3569 0.0007 6 6 5.6312 0.9378 0.0007 7 6 6.9127 0.2171 0.0014 8 7 7.0822 -1.0961 0.0077 9 6 8.4097 -1.2867 0.0036 10 6 9.1169 -2.6175 0.0052 11 6 8.7192 -3.4048 1.2553 12 6 8.7195 -3.4077 -1.2431 13 6 9.4369 -4.7590 -1.2411 14 6 10.9502 -4.5330 -1.2410 15 1 11.4613 -5.4957 -1.2392 16 8 11.3221 -3.7979 -2.4086 17 6 11.3476 -3.7427 0.0073 18 6 10.6302 -2.3914 0.0054 19 7 8.9770 -0.1161 0.0027 20 8 8.1407 0.7622 0.0014 21 6 5.4944 2.2890 0.0012 22 6 4.0549 2.5507 0.0011 23 6 3.2765 3.7113 0.0016 24 6 3.9386 5.0651 0.0016 25 8 4.4616 5.3396 1.3028 26 14 2.6871 6.3684 -0.4522 27 6 1.9133 3.6152 0.0021 28 6 1.2953 2.3730 0.0005 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8901 32 1 7.6412 -3.5662 1.2554 33 1 9.2304 -4.3675 1.2563 34 1 9.0023 -2.8418 2.1447 35 1 7.6415 -3.5692 -1.2430 36 1 9.0027 -2.8468 -2.1337 37 1 9.1541 -5.3219 -2.1308 38 1 9.1533 -5.3197 -0.3505 39 1 11.0998 -4.2402 -3.2392 40 1 12.4258 -3.5820 0.0076 41 1 11.0639 -4.3035 0.8980 42 1 10.9138 -1.8307 -0.8853 43 1 10.9136 -1.8282 0.8945 44 1 6.2876 3.0219 0.0009 45 1 4.7507 5.0723 -0.7254 46 1 3.7931 5.3488 2.0015 47 1 3.3277 7.7081 -0.4564 48 1 2.1123 6.0766 -1.7900 49 1 1.3126 4.5127 0.0030 50 1 0.2170 2.3124 -0.0040 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_270196_14034410_8783124.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:03 Heat of formation + Delta-G solvation = -6.234207 kcal Electronic energy + Delta-G solvation = -36205.409070 eV Core-core repulsion = 31363.031636 eV Total energy + Delta-G solvation = -4842.377434 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.161 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -46.61257 -43.71950 -40.86784 -40.72422 -39.13060 -37.60499 -37.05316 -36.13087 -34.55098 -33.21342 -32.00273 -31.92672 -31.65935 -30.62678 -28.69387 -27.91072 -26.42262 -25.61095 -25.51515 -24.03390 -23.78528 -23.07892 -22.10400 -21.69427 -20.04908 -19.47559 -19.21452 -18.94460 -18.70415 -17.96153 -17.71235 -17.59899 -17.50681 -17.01347 -16.57535 -16.52913 -16.22986 -16.05584 -15.82948 -15.64970 -15.01186 -14.84824 -14.64055 -14.42528 -14.39348 -14.12949 -14.03443 -13.73255 -13.61131 -13.47592 -13.41002 -13.25059 -13.07246 -12.90941 -12.76182 -12.66576 -12.56018 -12.40464 -12.18760 -12.15415 -12.11398 -11.93332 -11.87303 -11.76364 -11.30629 -11.06513 -10.75836 -10.71999 -10.49415 -9.70282 -9.00748 -5.10201 -0.91030 0.05525 0.15295 0.57392 0.93369 1.21724 1.53769 1.60216 1.93335 1.98611 2.22633 2.34579 2.35741 2.81780 3.22293 3.29707 3.44635 3.49533 3.56543 3.63522 3.70780 3.75038 3.78064 3.84405 3.97123 4.04399 4.05619 4.06821 4.10005 4.16841 4.23130 4.27899 4.37503 4.39293 4.46158 4.46955 4.49108 4.61367 4.69701 4.74864 4.78238 4.79324 4.81432 4.87488 4.98325 5.00140 5.01515 5.08595 5.15935 5.16567 5.25011 5.29983 5.30763 5.46813 5.62317 6.17354 6.53043 6.71333 7.04907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.154 3.846 4 C 0.048 3.952 5 O -0.154 6.154 6 C 0.098 3.902 7 C 0.242 3.758 8 N -0.444 5.444 9 C 0.193 3.807 10 C 0.033 3.967 11 C -0.145 4.145 12 C -0.100 4.100 13 C -0.153 4.153 14 C 0.102 3.898 15 H 0.058 0.942 16 O -0.563 6.563 17 C -0.113 4.113 18 C -0.103 4.103 19 N -0.366 5.366 20 O 0.104 5.896 21 C -0.119 4.119 22 C -0.076 4.076 23 C -0.099 4.099 24 C -0.065 4.065 25 O -0.536 6.536 26 Si 0.685 3.315 27 C -0.085 4.085 28 C -0.177 4.177 29 H 0.061 0.939 30 H 0.106 0.894 31 H 0.062 0.938 32 H 0.068 0.932 33 H 0.077 0.923 34 H 0.058 0.942 35 H 0.074 0.926 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.079 0.921 39 H 0.377 0.623 40 H 0.075 0.925 41 H 0.081 0.919 42 H 0.079 0.921 43 H 0.068 0.932 44 H 0.178 0.822 45 H 0.115 0.885 46 H 0.379 0.621 47 H -0.252 1.252 48 H -0.255 1.255 49 H 0.142 0.858 50 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.175 -0.415 1.216 6.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.222 6.222 3 C 0.108 3.892 4 C 0.000 4.000 5 O -0.054 6.054 6 C 0.048 3.952 7 C 0.025 3.975 8 N -0.178 5.178 9 C -0.080 4.080 10 C 0.031 3.969 11 C -0.203 4.203 12 C -0.139 4.139 13 C -0.190 4.190 14 C 0.043 3.957 15 H 0.076 0.924 16 O -0.369 6.369 17 C -0.150 4.150 18 C -0.141 4.141 19 N -0.069 5.069 20 O 0.041 5.959 21 C -0.142 4.142 22 C -0.078 4.078 23 C -0.100 4.100 24 C -0.176 4.176 25 O -0.341 6.341 26 Si 0.586 3.414 27 C -0.102 4.102 28 C -0.196 4.196 29 H 0.080 0.920 30 H 0.124 0.876 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.096 0.904 34 H 0.077 0.923 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.098 0.902 39 H 0.224 0.776 40 H 0.094 0.906 41 H 0.100 0.900 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.196 0.804 45 H 0.132 0.868 46 H 0.227 0.773 47 H -0.177 1.177 48 H -0.179 1.179 49 H 0.159 0.841 50 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.812 -0.188 0.771 4.877 hybrid contribution -0.183 -0.578 -0.618 0.866 sum -4.995 -0.766 0.153 5.056 Atomic orbital electron populations 1.23210 0.77210 1.04872 1.01810 1.86211 1.22242 1.25536 1.88196 1.17730 0.86337 0.86023 0.99087 1.18745 0.87381 0.86634 1.07272 1.84107 1.11506 1.33953 1.75828 1.17262 0.80653 0.88743 1.08574 1.24297 0.87133 0.86770 0.99316 1.72290 1.15320 1.11721 1.18436 1.25785 0.86589 0.96203 0.99460 1.19055 0.94319 0.85461 0.98071 1.21996 1.02754 1.00186 0.95331 1.21470 1.00708 0.95499 0.96201 1.22312 0.96049 0.97300 1.03358 1.21811 0.93256 0.94257 0.86352 0.92389 1.86534 1.84734 1.49745 1.15856 1.21609 1.01170 0.95988 0.96244 1.21461 0.91239 0.97830 1.03555 1.74680 1.12843 0.98643 1.20726 1.85522 1.11799 1.33016 1.65548 1.22743 0.95578 0.93390 1.02465 1.19269 0.92203 0.92069 1.04223 1.19469 0.92905 0.94380 1.03266 1.25048 1.05481 0.97692 0.89357 1.86534 1.38194 1.93367 1.16019 0.94975 0.83067 0.77832 0.85519 1.20408 0.93085 0.97292 0.99436 1.20998 1.00494 0.90409 1.07657 0.92048 0.87599 0.91964 0.91274 0.90443 0.92253 0.90761 0.91046 0.91016 0.90211 0.77610 0.90587 0.90038 0.90236 0.91317 0.80428 0.86781 0.77337 1.17698 1.17914 0.84082 0.83213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.55 10.50 -19.64 -0.21 -0.76 16 3 C 0.15 0.24 6.70 -39.13 -0.26 -0.02 16 4 C 0.05 0.16 7.35 -38.27 -0.28 -0.13 16 5 O -0.15 -0.74 10.60 2.62 0.03 -0.71 16 6 C 0.10 0.34 7.15 -36.89 -0.26 0.07 16 7 C 0.24 1.02 8.27 -14.05 -0.12 0.91 16 8 N -0.44 -2.30 11.59 -10.23 -0.12 -2.42 16 9 C 0.19 0.84 6.39 -156.60 -1.00 -0.16 16 10 C 0.03 0.07 0.74 -155.66 -0.11 -0.05 16 11 C -0.14 -0.11 7.76 37.16 0.29 0.18 16 12 C -0.10 -0.13 4.57 -26.73 -0.12 -0.25 16 13 C -0.15 0.13 5.36 -26.73 -0.14 -0.01 16 14 C 0.10 -0.03 3.77 -26.73 -0.10 -0.14 16 15 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 16 O -0.56 -0.54 11.97 -35.23 -0.42 -0.96 16 17 C -0.11 -0.02 5.39 -26.73 -0.14 -0.16 16 18 C -0.10 -0.19 4.08 -26.73 -0.11 -0.30 16 19 N -0.37 -1.82 11.45 31.26 0.36 -1.46 16 20 O 0.10 0.42 11.34 16.25 0.18 0.61 16 21 C -0.12 -0.20 10.93 -37.21 -0.41 -0.60 16 22 C -0.08 -0.14 6.16 -105.20 -0.65 -0.79 16 23 C -0.10 0.02 5.26 -104.63 -0.55 -0.53 16 24 C -0.07 0.06 2.70 36.01 0.10 0.16 16 25 O -0.54 0.30 12.88 -35.23 -0.45 -0.15 16 26 Si 0.69 -1.42 29.93 -169.99 -5.09 -6.50 16 27 C -0.08 0.16 8.62 -39.97 -0.34 -0.18 16 28 C -0.18 0.24 9.03 -39.37 -0.36 -0.11 16 29 H 0.06 -0.25 7.66 -51.93 -0.40 -0.64 16 30 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 32 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 33 H 0.08 -0.08 4.81 -51.93 -0.25 -0.33 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 35 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 36 H 0.07 0.18 7.68 -51.93 -0.40 -0.22 16 37 H 0.07 -0.12 8.14 -51.92 -0.42 -0.55 16 38 H 0.08 -0.13 6.43 -51.93 -0.33 -0.46 16 39 H 0.38 -0.97 9.08 45.56 0.41 -0.56 16 40 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.08 -0.11 6.43 -51.92 -0.33 -0.44 16 42 H 0.08 0.30 7.68 -51.93 -0.40 -0.09 16 43 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 44 H 0.18 -0.07 8.06 -52.49 -0.42 -0.50 16 45 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 46 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 47 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 48 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 49 H 0.14 -0.69 5.08 -52.49 -0.27 -0.96 16 50 H 0.15 -0.64 6.26 -52.49 -0.33 -0.97 16 LS Contribution 403.14 15.07 6.08 6.08 Total: 0.00 -9.27 403.14 -8.94 -18.20 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -5.71 Total: -10.72 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -3.59 Total: -1.19 kcal Atomic # 7 Polarization: -4.12 SS G_CDS: 0.24 Total: -3.88 kcal Atomic # 8 Polarization: -1.11 SS G_CDS: -0.87 Total: -1.98 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.09 Total: -6.50 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.27 -8.94 -18.20 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_270196_14034410_8783124.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.970 kcal (2) G-P(sol) polarization free energy of solvation -9.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.205 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds