Wall clock time and date at job start Mon Mar 8 2021 05:32:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35963 * 116.99552 * 2 1 4 4 C 1.39385 * 120.11842 * 180.02562 * 3 2 1 5 5 O 1.34846 * 133.24386 * 0.40539 * 4 3 2 6 6 C 1.34867 * 110.85280 * 180.08879 * 5 4 3 7 7 C 1.47026 * 125.13573 * 179.81277 * 6 5 4 8 8 N 1.32414 * 126.70908 * 359.69659 * 7 6 5 9 9 C 1.34106 * 105.53045 * 179.73784 * 8 7 6 10 10 C 1.50701 * 126.15787 * 180.02562 * 9 8 7 11 11 Si 1.86298 * 109.46839 * 90.00307 * 10 9 8 12 12 C 1.86303 * 109.47644 * 59.99878 * 11 10 9 13 13 C 1.86298 * 109.47092 * 180.02562 * 11 10 9 14 14 C 1.86301 * 109.46928 * 299.99717 * 11 10 9 15 15 N 1.30078 * 107.68181 * 359.97438 * 9 8 7 16 16 O 1.21277 * 110.55050 * 0.02562 * 15 9 8 17 17 C 1.35805 * 109.73094 * 359.54908 * 6 5 4 18 18 C 1.40584 * 119.14767 * 180.02562 * 4 3 2 19 19 C 1.39742 * 120.12887 * 0.03812 * 18 4 3 20 20 C 1.50699 * 120.09297 * 179.97438 * 19 18 4 21 21 O 1.42898 * 109.47658 * 74.99820 * 20 19 18 22 22 Si 1.86301 * 109.46955 * 194.99792 * 20 19 18 23 23 H 1.48503 * 109.47489 * 59.99704 * 22 20 19 24 24 H 1.48499 * 109.47162 * 179.97438 * 22 20 19 25 25 H 1.48505 * 109.46897 * 299.99674 * 22 20 19 26 26 C 1.36666 * 119.81397 * 359.94919 * 19 18 4 27 27 C 1.38314 * 120.12169 * 0.02562 * 3 2 1 28 28 H 1.08998 * 109.47154 * 60.00614 * 1 2 3 29 29 H 1.09004 * 109.47127 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47519 * 300.00031 * 1 2 3 31 31 H 1.09006 * 109.47064 * 209.99533 * 10 9 8 32 32 H 1.08991 * 109.47213 * 329.99667 * 10 9 8 33 33 H 1.09002 * 109.46883 * 59.99573 * 12 11 10 34 34 H 1.08993 * 109.47180 * 179.97438 * 12 11 10 35 35 H 1.09006 * 109.46622 * 299.99999 * 12 11 10 36 36 H 1.08997 * 109.47527 * 59.99361 * 13 11 10 37 37 H 1.09002 * 109.47380 * 179.97438 * 13 11 10 38 38 H 1.09002 * 109.47290 * 300.00126 * 13 11 10 39 39 H 1.08993 * 109.47337 * 60.00636 * 14 11 10 40 40 H 1.09002 * 109.47015 * 180.02562 * 14 11 10 41 41 H 1.08999 * 109.47483 * 299.99907 * 14 11 10 42 42 H 1.08000 * 126.95352 * 180.23354 * 17 6 5 43 43 H 1.09002 * 109.47500 * 314.99229 * 20 19 18 44 44 H 0.96699 * 114.00277 * 179.97438 * 21 20 19 45 45 H 1.07998 * 119.76179 * 179.97438 * 26 19 18 46 46 H 1.07997 * 119.66507 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4380 1.2874 -0.0005 5 8 4.4139 0.3570 -0.0081 6 6 5.6311 0.9378 -0.0028 7 6 6.9126 0.2172 -0.0046 8 7 7.0822 -1.0960 -0.0058 9 6 8.4096 -1.2867 -0.0131 10 6 9.1168 -2.6175 -0.0178 11 14 9.3988 -3.1645 -1.7762 12 6 10.4459 -1.9017 -2.6593 13 6 10.2723 -4.8100 -1.7821 14 6 7.7594 -3.3293 -2.6457 15 7 8.9769 -0.1161 -0.0165 16 8 8.1406 0.7622 -0.0115 17 6 5.4943 2.2890 -0.0016 18 6 4.0548 2.5507 0.0000 19 6 3.2765 3.7113 0.0019 20 6 3.9385 5.0651 0.0031 21 8 4.4603 5.3414 -1.2982 22 14 2.6875 6.3677 0.4600 23 1 2.1452 6.0807 1.8123 24 1 3.3400 7.7017 0.4618 25 1 1.5801 6.3591 -0.5294 26 6 1.9132 3.6152 0.0022 27 6 1.2953 2.3730 0.0005 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8899 31 1 10.0760 -2.5210 0.4909 32 1 8.5042 -3.3562 0.4988 33 1 11.4050 -1.8053 -2.1505 34 1 10.6112 -2.2221 -3.6878 35 1 9.9343 -0.9392 -2.6558 36 1 9.6594 -5.5487 -1.2656 37 1 10.4369 -5.1304 -2.8109 38 1 11.2314 -4.7141 -1.2732 39 1 7.2479 -2.3669 -2.6423 40 1 7.9243 -3.6499 -3.6744 41 1 7.1467 -4.0682 -2.1292 42 1 6.2875 3.0219 -0.0013 43 1 4.7514 5.0715 0.7293 44 1 4.9011 6.1990 -1.3713 45 1 1.3125 4.5127 0.0040 46 1 0.2170 2.3124 0.0005 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_270196_16471444_8783124.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:32:00 Heat of formation + Delta-G solvation = 2.295623 kcal Electronic energy + Delta-G solvation = -29884.091376 eV Core-core repulsion = 25675.398291 eV Total energy + Delta-G solvation = -4208.693085 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 362.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -46.56219 -43.66680 -40.66433 -38.99600 -37.19939 -37.07127 -34.78414 -33.30768 -31.99566 -30.89013 -30.07029 -29.20802 -28.65333 -28.45965 -28.38790 -26.35764 -25.50050 -24.56546 -23.62853 -22.20078 -21.62034 -19.60392 -19.23177 -18.80395 -18.62094 -18.50809 -17.74950 -17.49195 -16.79879 -16.47793 -16.36884 -15.77744 -15.28252 -14.86328 -14.84348 -14.76917 -14.47230 -14.31445 -14.22314 -14.00845 -13.99321 -13.81741 -13.70777 -13.49200 -13.41021 -13.28831 -13.24565 -13.13934 -13.07877 -12.89445 -12.65536 -12.46855 -12.18786 -12.08794 -12.08299 -12.03378 -11.74861 -10.94093 -10.90327 -10.84112 -10.51001 -10.39509 -9.63777 -8.94998 -0.87414 0.10462 0.19431 0.61229 0.85754 1.05589 1.36998 1.42498 1.46535 1.72934 1.80334 1.82749 1.83131 2.02820 2.27362 2.38087 2.46865 2.53556 2.98108 3.25410 3.48536 3.54197 3.66947 3.85486 3.94036 3.97207 4.06602 4.11519 4.14421 4.28228 4.37542 4.42058 4.49129 4.52101 4.67871 4.68592 4.73356 4.74070 4.77008 4.80215 4.81389 4.83256 4.86635 5.02900 5.05347 5.24079 5.35340 5.43266 5.52463 5.59926 5.66903 6.22374 6.53110 7.08191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.308 6.308 3 C 0.154 3.846 4 C 0.049 3.951 5 O -0.153 6.153 6 C 0.096 3.904 7 C 0.245 3.755 8 N -0.448 5.448 9 C 0.201 3.799 10 C -0.341 4.341 11 Si 1.025 2.975 12 C -0.449 4.449 13 C -0.445 4.445 14 C -0.447 4.447 15 N -0.376 5.376 16 O 0.101 5.899 17 C -0.117 4.117 18 C -0.075 4.075 19 C -0.054 4.054 20 C -0.080 4.080 21 O -0.541 6.541 22 Si 0.945 3.055 23 H -0.247 1.247 24 H -0.253 1.253 25 H -0.246 1.246 26 C -0.094 4.094 27 C -0.175 4.175 28 H 0.061 0.939 29 H 0.106 0.894 30 H 0.061 0.939 31 H 0.109 0.891 32 H 0.113 0.887 33 H 0.072 0.928 34 H 0.073 0.927 35 H 0.065 0.935 36 H 0.072 0.928 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.066 0.934 40 H 0.071 0.929 41 H 0.073 0.927 42 H 0.178 0.822 43 H 0.078 0.922 44 H 0.381 0.619 45 H 0.137 0.863 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.459 2.370 0.646 3.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.221 6.221 3 C 0.108 3.892 4 C 0.001 3.999 5 O -0.053 6.053 6 C 0.046 3.954 7 C 0.027 3.973 8 N -0.183 5.183 9 C -0.071 4.071 10 C -0.423 4.423 11 Si 1.219 2.781 12 C -0.557 4.557 13 C -0.553 4.553 14 C -0.555 4.555 15 N -0.082 5.082 16 O 0.040 5.960 17 C -0.140 4.140 18 C -0.076 4.076 19 C -0.054 4.054 20 C -0.190 4.190 21 O -0.347 6.347 22 Si 0.767 3.233 23 H -0.170 1.170 24 H -0.177 1.177 25 H -0.170 1.170 26 C -0.112 4.112 27 C -0.194 4.194 28 H 0.080 0.920 29 H 0.124 0.876 30 H 0.079 0.921 31 H 0.127 0.873 32 H 0.132 0.868 33 H 0.091 0.909 34 H 0.092 0.908 35 H 0.084 0.916 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.085 0.915 40 H 0.090 0.910 41 H 0.092 0.908 42 H 0.196 0.804 43 H 0.096 0.904 44 H 0.228 0.772 45 H 0.154 0.846 46 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -2.520 1.551 0.807 3.067 hybrid contribution 0.177 0.517 0.132 0.562 sum -2.343 2.068 0.939 3.263 Atomic orbital electron populations 1.23205 0.77277 1.04834 1.01793 1.86207 1.22188 1.25506 1.88235 1.17710 0.86363 0.85961 0.99165 1.18694 0.87337 0.86565 1.07341 1.84108 1.11483 1.33910 1.75849 1.17263 0.80696 0.88766 1.08695 1.24284 0.87131 0.86815 0.99030 1.72351 1.15285 1.11750 1.18920 1.25227 0.86618 0.96030 0.99183 1.24970 1.02823 0.91560 1.22972 0.79097 0.67824 0.67638 0.63573 1.26124 1.09677 1.11652 1.08222 1.26039 1.08008 1.16291 1.04981 1.26096 1.16659 1.04885 1.07861 1.74657 1.12867 0.98589 1.22112 1.85502 1.11733 1.32984 1.65802 1.22701 0.95452 0.93363 1.02472 1.19238 0.92253 0.92010 1.04121 1.18326 0.92265 0.92186 1.02671 1.24696 1.04924 1.00138 0.89235 1.86540 1.77877 1.41783 1.28532 0.85780 0.79081 0.77401 0.81066 1.16980 1.17733 1.16956 1.20525 0.93452 0.97859 0.99318 1.20955 1.00434 0.90346 1.07649 0.92040 0.87587 0.92055 0.87278 0.86811 0.90917 0.90829 0.91590 0.90847 0.90665 0.90928 0.91484 0.91029 0.90797 0.80426 0.90400 0.77167 0.84569 0.83289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.77 10.50 -19.62 -0.21 -0.97 16 3 C 0.15 0.39 6.70 -39.13 -0.26 0.13 16 4 C 0.05 0.19 7.35 -38.27 -0.28 -0.09 16 5 O -0.15 -0.77 10.60 2.63 0.03 -0.75 16 6 C 0.10 0.32 7.15 -36.89 -0.26 0.06 16 7 C 0.24 0.93 8.27 -14.05 -0.12 0.81 16 8 N -0.45 -2.11 11.59 -10.23 -0.12 -2.23 16 9 C 0.20 0.67 6.55 -156.61 -1.03 -0.35 16 10 C -0.34 -0.05 5.09 36.01 0.18 0.13 16 11 Si 1.02 -1.25 12.39 -169.99 -2.11 -3.36 16 12 C -0.45 -0.09 8.65 101.05 0.87 0.79 16 13 C -0.44 0.68 8.65 101.05 0.87 1.56 16 14 C -0.45 -0.29 8.65 101.05 0.87 0.58 16 15 N -0.38 -1.48 12.14 31.26 0.38 -1.10 16 16 O 0.10 0.33 11.34 16.25 0.18 0.52 16 17 C -0.12 -0.17 10.93 -37.21 -0.41 -0.58 16 18 C -0.08 -0.18 6.16 -105.21 -0.65 -0.83 16 19 C -0.05 -0.06 5.30 -104.63 -0.55 -0.62 16 20 C -0.08 0.09 2.70 36.01 0.10 0.19 16 21 O -0.54 0.35 12.86 -35.23 -0.45 -0.10 16 22 Si 0.94 -1.61 25.50 -169.99 -4.33 -5.94 16 23 H -0.25 0.26 7.11 56.52 0.40 0.66 16 24 H -0.25 0.37 7.11 56.52 0.40 0.77 16 25 H -0.25 0.20 6.74 56.52 0.38 0.59 16 26 C -0.09 -0.03 8.62 -39.96 -0.34 -0.37 16 27 C -0.17 -0.03 9.03 -39.37 -0.36 -0.38 16 28 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 29 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 30 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 31 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H 0.11 -0.08 7.96 -51.93 -0.41 -0.50 16 33 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 34 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 35 H 0.06 0.11 7.96 -51.93 -0.41 -0.31 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 39 H 0.07 0.16 7.96 -51.93 -0.41 -0.26 16 40 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 41 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 42 H 0.18 -0.25 8.06 -52.49 -0.42 -0.67 16 43 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 44 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 45 H 0.14 -0.22 4.84 -52.49 -0.25 -0.47 16 46 H 0.15 -0.41 6.26 -52.49 -0.33 -0.74 16 LS Contribution 394.41 15.07 5.94 5.94 Total: 0.00 -8.21 394.41 -6.65 -14.86 By element: Atomic # 1 Polarization: -3.22 SS G_CDS: -5.60 Total: -8.82 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -0.36 Total: 1.96 kcal Atomic # 7 Polarization: -3.60 SS G_CDS: 0.26 Total: -3.34 kcal Atomic # 8 Polarization: -0.85 SS G_CDS: -0.45 Total: -1.30 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: -6.44 Total: -9.30 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -8.21 -6.65 -14.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_270196_16471444_8783124.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.155 kcal (2) G-P(sol) polarization free energy of solvation -8.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds