Wall clock time and date at job start Mon Mar 8 2021 05:46:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86309 * 109.46734 * 2 1 4 4 C 1.50691 * 109.47325 * 240.00148 * 2 1 3 5 5 C 1.38022 * 120.33859 * 119.99537 * 4 2 1 6 6 N 1.31974 * 120.86146 * 180.02562 * 5 4 2 7 7 C 1.32403 * 121.61742 * 0.02562 * 6 5 4 8 8 N 1.39003 * 119.69938 * 180.02562 * 7 6 5 9 9 C 1.46496 * 119.99437 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74661 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99902 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08997 * 113.61223 * 270.84552 * 12 11 9 14 14 C 1.50698 * 113.61342 * 140.02323 * 12 11 9 15 15 C 1.38227 * 119.96786 * 120.00125 * 14 12 11 16 16 C 1.38237 * 120.04899 * 179.97438 * 15 14 12 17 17 C 1.38406 * 119.98611 * 0.02562 * 16 15 14 18 18 F 1.35100 * 120.03003 * 179.97438 * 17 16 15 19 19 C 1.38595 * 119.94104 * 359.97438 * 17 16 15 20 20 Cl 1.73593 * 120.02398 * 180.02562 * 19 17 16 21 21 C 1.38261 * 119.97302 * 299.72654 * 14 12 11 22 22 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 23 23 C 1.39133 * 120.59116 * 0.27800 * 7 6 5 24 24 C 1.38307 * 119.09365 * 359.43319 * 23 7 6 25 25 H 0.96693 * 113.99987 * 60.00451 * 1 2 3 26 26 H 1.09000 * 109.47038 * 119.99719 * 2 1 3 27 27 H 1.48500 * 109.99980 * 60.00098 * 3 2 1 28 28 H 1.48493 * 109.99681 * 181.31952 * 3 2 1 29 29 H 1.08004 * 119.57188 * 0.02562 * 5 4 2 30 30 H 0.97001 * 120.00446 * 359.97438 * 8 7 6 31 31 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 32 32 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 33 33 H 1.07993 * 119.97390 * 0.02562 * 15 14 12 34 34 H 1.07994 * 120.00771 * 179.97438 * 16 15 14 35 35 H 1.08001 * 119.98950 * 0.02562 * 21 14 12 36 36 H 1.08997 * 113.61668 * 89.11298 * 22 12 11 37 37 H 1.08998 * 113.61674 * 219.93807 * 22 12 11 38 38 H 1.07997 * 120.45610 * 179.70263 * 23 7 6 39 39 H 1.08007 * 120.74386 * 180.26572 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7253 -0.0462 -2.1435 6 7 3.1705 -0.6581 -3.2248 7 6 2.8760 -1.9242 -3.4767 8 7 3.3669 -2.5295 -4.6277 9 6 3.0447 -3.9298 -4.9132 10 1 2.1301 -4.2632 -4.4229 11 6 3.1062 -4.2836 -6.4086 12 6 4.5917 -4.6163 -6.1908 13 1 5.2551 -3.7624 -6.3282 14 6 5.0518 -5.8413 -6.9383 15 6 6.0657 -5.7399 -7.8723 16 6 6.4895 -6.8626 -8.5586 17 6 5.8979 -8.0890 -8.3108 18 9 6.3110 -9.1867 -8.9814 19 6 4.8813 -8.1901 -7.3742 20 17 4.1383 -9.7275 -7.0613 21 6 4.4634 -7.0665 -6.6852 22 6 4.2342 -4.8880 -4.7200 23 6 2.0754 -2.6525 -2.6025 24 6 1.5993 -2.0395 -1.4577 25 1 -0.3933 0.4416 -0.7650 26 1 1.7924 -0.5138 0.8900 27 1 1.5614 2.4680 1.2085 28 1 3.5345 1.7704 -0.0321 29 1 2.9856 0.9877 -1.9709 30 1 3.9222 -2.0245 -5.2423 31 1 2.9418 -3.4301 -7.0663 32 1 2.5000 -5.1485 -6.6779 33 1 6.5277 -4.7830 -8.0654 34 1 7.2814 -6.7825 -9.2884 35 1 3.6740 -7.1452 -5.9522 36 1 3.9360 -5.9184 -4.5262 37 1 4.9810 -4.5237 -4.0146 38 1 1.8327 -3.6836 -2.8126 39 1 0.9792 -2.5811 -0.7586 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10156536_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:46:03 Heat of formation + Delta-G solvation = 18.405866 kcal Electronic energy + Delta-G solvation = -24817.197300 eV Core-core repulsion = 20860.664719 eV Total energy + Delta-G solvation = -3956.532582 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.083 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -49.97641 -41.82004 -41.08336 -39.43104 -37.89549 -37.56679 -35.40252 -33.41833 -32.16381 -31.99110 -30.81019 -26.98118 -26.87371 -25.84620 -24.81372 -24.34323 -23.10084 -22.45403 -20.39844 -19.22712 -18.80167 -18.46203 -17.79979 -17.48229 -17.23879 -16.80103 -16.54805 -16.28534 -16.12742 -16.05435 -15.48625 -15.31088 -15.11571 -14.85520 -14.48560 -14.34329 -14.15668 -14.11929 -14.03119 -13.73608 -13.65656 -13.36249 -12.72698 -12.68228 -12.39729 -12.28297 -12.02120 -11.99056 -11.90815 -11.49351 -11.16825 -10.75528 -10.40926 -10.40184 -10.15058 -9.67114 -8.76253 -5.04619 -0.21063 -0.11236 0.21232 0.39730 0.92123 1.29832 1.61721 1.92598 1.97415 2.19774 2.81153 2.96423 3.17475 3.34012 3.42127 3.46822 3.48929 3.56011 3.66575 3.75461 3.82737 3.88927 3.93749 4.03190 4.05387 4.23375 4.31329 4.40877 4.47050 4.51289 4.57332 4.67848 4.69942 4.72733 4.74517 4.81570 4.86845 4.96919 5.00453 5.24634 5.30204 5.48927 5.51479 5.95022 6.45874 6.57790 7.11559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.053 4.053 3 Si 0.682 3.318 4 C -0.234 4.234 5 C 0.155 3.845 6 N -0.539 5.539 7 C 0.409 3.591 8 N -0.705 5.705 9 C 0.129 3.871 10 H 0.102 0.898 11 C -0.136 4.136 12 C -0.071 4.071 13 H 0.104 0.896 14 C -0.070 4.070 15 C -0.081 4.081 16 C -0.138 4.138 17 C 0.106 3.894 18 F -0.126 7.126 19 C -0.071 4.071 20 Cl -0.046 7.046 21 C -0.081 4.081 22 C -0.151 4.151 23 C -0.238 4.238 24 C -0.006 4.006 25 H 0.379 0.621 26 H 0.112 0.888 27 H -0.253 1.253 28 H -0.256 1.256 29 H 0.155 0.845 30 H 0.407 0.593 31 H 0.081 0.919 32 H 0.100 0.900 33 H 0.140 0.860 34 H 0.147 0.853 35 H 0.144 0.856 36 H 0.096 0.904 37 H 0.079 0.921 38 H 0.135 0.865 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.954 2.384 -1.714 3.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.239 4.239 5 C -0.002 4.002 6 N -0.256 5.256 7 C 0.174 3.826 8 N -0.337 5.337 9 C 0.022 3.978 10 H 0.120 0.880 11 C -0.174 4.174 12 C -0.089 4.089 13 H 0.122 0.878 14 C -0.070 4.070 15 C -0.099 4.099 16 C -0.157 4.157 17 C 0.085 3.915 18 F -0.104 7.104 19 C -0.099 4.099 20 Cl -0.017 7.017 21 C -0.100 4.100 22 C -0.190 4.190 23 C -0.262 4.262 24 C -0.031 4.031 25 H 0.226 0.774 26 H 0.129 0.871 27 H -0.178 1.178 28 H -0.181 1.181 29 H 0.172 0.828 30 H 0.243 0.757 31 H 0.100 0.900 32 H 0.119 0.881 33 H 0.158 0.842 34 H 0.164 0.836 35 H 0.162 0.838 36 H 0.114 0.886 37 H 0.098 0.902 38 H 0.153 0.847 39 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.028 2.747 -1.343 3.058 hybrid contribution -0.030 -1.353 0.306 1.387 sum -0.001 1.395 -1.038 1.738 Atomic orbital electron populations 1.86492 1.17320 1.81673 1.49278 1.24782 0.85025 1.09670 0.96963 0.94859 0.81070 0.78128 0.87526 1.21005 1.05831 0.96658 1.00451 1.22214 0.91535 0.98564 0.87881 1.67132 1.27223 1.09094 1.22122 1.18349 0.89098 0.88437 0.86702 1.44129 1.55967 1.10903 1.22664 1.21887 0.98346 0.80721 0.96803 0.88048 1.23462 0.95358 1.02827 0.95785 1.21581 0.96949 0.95247 0.95171 0.87766 1.19702 0.96095 0.94167 0.97049 1.21065 0.95727 0.98579 0.94564 1.21200 1.01695 0.90622 1.02186 1.17479 0.95835 0.84157 0.93981 1.91567 1.89015 1.51599 1.78234 1.21018 0.98564 0.89558 1.00763 1.98416 1.81060 1.27447 1.94801 1.20817 1.00212 0.89953 0.98994 1.23733 0.98935 1.00507 0.95829 1.21504 1.05263 1.02033 0.97407 1.21205 0.93855 0.93178 0.94910 0.77421 0.87063 1.17810 1.18103 0.82833 0.75701 0.90001 0.88120 0.84231 0.83569 0.83839 0.88565 0.90220 0.84746 0.84604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.07 12.78 -35.23 -0.45 -0.38 16 2 C -0.05 0.03 2.84 36.00 0.10 0.13 16 3 Si 0.68 -0.85 29.82 -169.99 -5.07 -5.92 16 4 C -0.23 -0.02 5.40 -104.47 -0.56 -0.58 16 5 C 0.16 0.10 9.84 -17.57 -0.17 -0.08 16 6 N -0.54 -1.05 10.39 -12.44 -0.13 -1.18 16 7 C 0.41 0.27 7.65 -155.02 -1.19 -0.91 16 8 N -0.70 1.15 5.44 -53.05 -0.29 0.86 16 9 C 0.13 -0.44 4.13 -67.02 -0.28 -0.72 16 10 H 0.10 -0.39 6.09 -51.93 -0.32 -0.71 16 11 C -0.14 0.56 7.29 -25.92 -0.19 0.37 16 12 C -0.07 0.26 3.86 -90.96 -0.35 -0.09 16 13 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 14 C -0.07 0.16 5.29 -104.62 -0.55 -0.40 16 15 C -0.08 0.17 9.71 -39.59 -0.38 -0.21 16 16 C -0.14 0.12 10.03 -39.52 -0.40 -0.28 16 17 C 0.11 0.13 7.28 -39.39 -0.29 -0.16 16 18 F -0.13 -0.36 16.84 2.25 0.04 -0.32 16 19 C -0.07 -0.05 6.33 -39.44 -0.25 -0.30 16 20 Cl -0.05 -0.07 28.62 -51.86 -1.48 -1.55 16 21 C -0.08 0.11 8.41 -39.56 -0.33 -0.22 16 22 C -0.15 0.53 7.26 -25.82 -0.19 0.34 16 23 C -0.24 0.04 9.29 -39.22 -0.36 -0.32 16 24 C -0.01 0.00 9.76 -39.32 -0.38 -0.38 16 25 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 26 H 0.11 -0.01 7.96 -51.93 -0.41 -0.43 16 27 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 28 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 29 H 0.16 -0.20 4.88 -52.48 -0.26 -0.46 16 30 H 0.41 -0.84 8.83 -40.82 -0.36 -1.20 16 31 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.10 -0.44 7.73 -51.93 -0.40 -0.84 16 33 H 0.14 -0.59 8.05 -52.49 -0.42 -1.01 16 34 H 0.15 -0.36 8.06 -52.49 -0.42 -0.79 16 35 H 0.14 -0.44 6.65 -52.49 -0.35 -0.79 16 36 H 0.10 -0.39 6.30 -51.93 -0.33 -0.72 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 38 H 0.13 -0.27 6.03 -52.49 -0.32 -0.59 16 39 H 0.14 -0.13 8.06 -52.48 -0.42 -0.55 16 LS Contribution 344.15 15.07 5.19 5.19 Total: 0.00 -6.37 344.15 -12.05 -18.42 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -4.08 Total: -11.29 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -5.77 Total: -3.82 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.42 Total: -0.32 kcal Atomic # 8 Polarization: 0.07 SS G_CDS: -0.45 Total: -0.38 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.07 Total: -5.92 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.48 Total: -1.55 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -6.37 -12.05 -18.42 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10156536_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.826 kcal (2) G-P(sol) polarization free energy of solvation -6.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds