Wall clock time and date at job start Mon Mar 8 2021 05:46:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.46774 * 2 1 4 4 C 1.50704 * 109.47473 * 240.00058 * 2 1 3 5 5 C 1.37976 * 120.32566 * 120.01738 * 4 2 1 6 6 N 1.32013 * 120.89878 * 179.70364 * 5 4 2 7 7 C 1.32343 * 121.64449 * 0.56934 * 6 5 4 8 8 N 1.39140 * 119.71566 * 179.71028 * 7 6 5 9 9 C 1.46506 * 120.00046 * 359.72948 * 8 7 6 10 10 H 1.08992 * 112.90684 * 336.24929 * 9 8 7 11 11 C 1.54049 * 113.61276 * 107.62018 * 9 8 7 12 12 C 1.53781 * 87.08031 * 89.07129 * 11 9 8 13 13 H 1.08999 * 113.61181 * 270.87794 * 12 11 9 14 14 C 1.50698 * 113.61565 * 139.97986 * 12 11 9 15 15 C 1.38215 * 119.97230 * 142.50631 * 14 12 11 16 16 C 1.38236 * 120.04872 * 179.97438 * 15 14 12 17 17 C 1.38393 * 119.99006 * 359.97438 * 16 15 14 18 18 F 1.35108 * 120.03406 * 180.02562 * 17 16 15 19 19 C 1.38594 * 119.93803 * 0.02562 * 17 16 15 20 20 Cl 1.73599 * 120.02311 * 180.02562 * 19 17 16 21 21 C 1.38263 * 119.96393 * 322.22204 * 14 12 11 22 22 C 1.53781 * 87.08070 * 25.42738 * 12 11 9 23 23 C 1.39339 * 120.56416 * 359.43421 * 7 6 5 24 24 F 1.35093 * 120.47246 * 180.25291 * 23 7 6 25 25 C 1.38449 * 119.05528 * 0.27904 * 23 7 6 26 26 H 0.96693 * 114.00485 * 299.99654 * 1 2 3 27 27 H 1.08997 * 109.47074 * 119.99792 * 2 1 3 28 28 H 1.48497 * 110.00430 * 299.99712 * 3 2 1 29 29 H 1.48502 * 110.00099 * 61.32095 * 3 2 1 30 30 H 1.07998 * 119.55698 * 359.97438 * 5 4 2 31 31 H 0.97002 * 120.00066 * 179.72733 * 8 7 6 32 32 H 1.09005 * 113.62125 * 334.52173 * 11 9 8 33 33 H 1.09003 * 113.61268 * 203.61961 * 11 9 8 34 34 H 1.08004 * 119.97253 * 359.96956 * 15 14 12 35 35 H 1.08010 * 120.00440 * 180.02562 * 16 15 14 36 36 H 1.07995 * 119.99889 * 359.97438 * 21 14 12 37 37 H 1.09002 * 113.61445 * 89.11830 * 22 12 11 38 38 H 1.09002 * 113.61408 * 219.93560 * 22 12 11 39 39 H 1.07999 * 120.75389 * 180.02562 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7254 -0.0464 -2.1429 6 7 3.1765 -0.6593 -3.2215 7 6 2.8795 -1.9234 -3.4772 8 7 3.3719 -2.5282 -4.6295 9 6 4.2104 -1.7641 -5.5567 10 1 4.0513 -0.6883 -5.4845 11 6 5.6952 -2.1738 -5.5265 12 6 5.3496 -3.2110 -6.6081 13 1 5.0367 -4.1742 -6.2051 14 6 6.4004 -3.3374 -7.6809 15 6 6.6943 -4.5770 -8.2170 16 6 7.6574 -4.6947 -9.2015 17 6 8.3277 -3.5706 -9.6514 18 9 9.2689 -3.6845 -10.6141 19 6 8.0326 -2.3278 -9.1136 20 17 8.8716 -0.9162 -9.6767 21 6 7.0653 -2.2123 -8.1322 22 6 4.1768 -2.2965 -6.9991 23 6 2.0826 -2.6555 -2.5994 24 9 1.7848 -3.9473 -2.8597 25 6 1.5999 -2.0401 -1.4570 26 1 -0.3934 0.4416 0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5878 2.4586 1.2243 30 1 2.9850 0.9876 -1.9701 31 1 3.1601 -3.4556 -4.8190 32 1 6.0069 -2.6167 -4.5806 33 1 6.3711 -1.3915 -5.8719 34 1 6.1710 -5.4543 -7.8663 35 1 7.8862 -5.6637 -9.6202 36 1 6.8313 -1.2436 -7.7162 37 1 4.4375 -1.5477 -7.7470 38 1 3.2631 -2.8384 -7.2433 39 1 0.9803 -2.5818 -0.7577 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10156536_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:46:12 Heat of formation + Delta-G solvation = -25.294802 kcal Electronic energy + Delta-G solvation = -27313.818917 eV Core-core repulsion = 22885.937356 eV Total energy + Delta-G solvation = -4427.881561 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.073 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -49.93392 -49.86958 -41.69943 -41.07138 -39.36266 -38.02657 -37.53182 -35.57073 -33.25336 -32.14552 -32.01610 -30.82102 -26.92976 -26.79632 -26.06890 -24.88319 -24.20807 -22.90516 -22.68927 -20.42054 -19.50827 -18.90384 -18.69971 -18.18048 -18.00467 -17.75066 -17.20305 -16.85963 -16.75618 -16.53487 -16.27345 -15.90976 -15.77908 -15.19840 -15.06269 -15.01639 -14.77974 -14.40168 -14.25511 -14.19514 -14.16971 -13.99607 -13.71451 -13.65465 -13.57354 -12.72577 -12.66668 -12.55921 -12.22284 -12.07087 -11.95648 -11.88544 -11.41023 -11.18951 -10.71597 -10.69435 -10.48699 -10.09996 -9.62089 -8.77799 -5.04573 -0.16263 -0.06313 -0.05758 0.13206 0.96916 1.18333 1.52192 1.88104 1.88925 2.24925 2.51720 3.01014 3.04686 3.14246 3.25972 3.34773 3.45833 3.54744 3.56163 3.60400 3.77733 3.84973 3.91156 3.94734 4.04183 4.12199 4.23921 4.36769 4.47535 4.54306 4.58353 4.68567 4.70277 4.76323 4.78452 4.83104 4.91993 4.93540 4.99440 5.04988 5.30808 5.42085 5.56171 5.94986 6.15339 6.35303 6.94512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.063 4.063 3 Si 0.679 3.321 4 C -0.161 4.161 5 C 0.151 3.849 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.700 5.700 9 C 0.134 3.866 10 H 0.112 0.888 11 C -0.146 4.146 12 C -0.074 4.074 13 H 0.102 0.898 14 C -0.068 4.068 15 C -0.082 4.082 16 C -0.139 4.139 17 C 0.105 3.895 18 F -0.126 7.126 19 C -0.071 4.071 20 Cl -0.047 7.047 21 C -0.081 4.081 22 C -0.139 4.139 23 C -0.019 4.019 24 F -0.134 7.134 25 C -0.037 4.037 26 H 0.382 0.618 27 H 0.079 0.921 28 H -0.251 1.251 29 H -0.258 1.258 30 H 0.164 0.836 31 H 0.412 0.588 32 H 0.077 0.923 33 H 0.096 0.904 34 H 0.139 0.861 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.100 0.900 38 H 0.078 0.922 39 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.270 -0.373 3.665 3.694 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.173 4.173 3 Si 0.579 3.421 4 C -0.166 4.166 5 C -0.007 4.007 6 N -0.225 5.225 7 C 0.154 3.846 8 N -0.332 5.332 9 C 0.028 3.972 10 H 0.130 0.870 11 C -0.184 4.184 12 C -0.092 4.092 13 H 0.120 0.880 14 C -0.069 4.069 15 C -0.100 4.100 16 C -0.157 4.157 17 C 0.085 3.915 18 F -0.105 7.105 19 C -0.099 4.099 20 Cl -0.017 7.017 21 C -0.099 4.099 22 C -0.177 4.177 23 C -0.046 4.046 24 F -0.113 7.113 25 C -0.063 4.063 26 H 0.230 0.770 27 H 0.097 0.903 28 H -0.175 1.175 29 H -0.183 1.183 30 H 0.181 0.819 31 H 0.250 0.750 32 H 0.096 0.904 33 H 0.114 0.886 34 H 0.157 0.843 35 H 0.164 0.836 36 H 0.163 0.837 37 H 0.118 0.882 38 H 0.097 0.903 39 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.349 0.796 2.292 2.451 hybrid contribution -1.486 -1.259 0.732 2.080 sum -1.137 -0.463 3.024 3.263 Atomic orbital electron populations 1.86585 1.17793 1.80183 1.49917 1.24568 0.84464 1.10814 0.97500 0.95205 0.91553 0.74420 0.80901 1.19837 1.03613 0.94240 0.98886 1.22278 0.91936 0.98974 0.87468 1.67310 1.26395 1.07381 1.21422 1.18369 0.90044 0.89122 0.87089 1.44194 1.54196 1.14332 1.20521 1.21851 0.89791 0.97470 0.88099 0.87045 1.23678 0.97243 0.98564 0.98956 1.21629 0.93994 0.99469 0.94148 0.87962 1.19710 0.97282 0.92395 0.97499 1.21057 0.96205 0.97748 0.95021 1.21187 0.97557 0.97910 0.99087 1.17471 0.90883 0.92958 0.90223 1.91566 1.61941 1.96653 1.60303 1.21019 1.00041 0.87861 1.00942 1.98414 1.76714 1.38239 1.88380 1.20836 0.94026 1.00118 0.94929 1.23492 0.98277 0.99365 0.96596 1.17960 1.06895 0.80936 0.98781 1.91488 1.92210 1.33588 1.93965 1.21258 0.95865 0.94370 0.94794 0.77027 0.90320 1.17497 1.18260 0.81923 0.75024 0.90444 0.88563 0.84293 0.83620 0.83745 0.88157 0.90316 0.83384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.02 12.75 -35.23 -0.45 -0.47 16 2 C -0.06 0.08 2.83 36.01 0.10 0.19 16 3 Si 0.68 -1.46 29.82 -169.99 -5.07 -6.53 16 4 C -0.16 -0.05 5.43 -104.47 -0.57 -0.61 16 5 C 0.15 0.04 9.84 -17.57 -0.17 -0.14 16 6 N -0.51 -0.71 9.13 -12.37 -0.11 -0.83 16 7 C 0.39 0.46 7.49 -154.86 -1.16 -0.70 16 8 N -0.70 0.60 5.42 -52.92 -0.29 0.31 16 9 C 0.13 -0.25 4.37 -66.97 -0.29 -0.54 16 10 H 0.11 -0.09 7.41 -51.93 -0.38 -0.48 16 11 C -0.15 0.36 7.26 -25.78 -0.19 0.17 16 12 C -0.07 0.22 3.86 -90.96 -0.35 -0.13 16 13 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 14 C -0.07 0.11 5.29 -104.62 -0.55 -0.44 16 15 C -0.08 0.14 9.71 -39.59 -0.38 -0.24 16 16 C -0.14 0.07 10.02 -39.53 -0.40 -0.33 16 17 C 0.10 0.16 7.28 -39.39 -0.29 -0.12 16 18 F -0.13 -0.40 16.84 2.25 0.04 -0.36 16 19 C -0.07 -0.08 6.33 -39.44 -0.25 -0.33 16 20 Cl -0.05 -0.09 28.62 -51.86 -1.48 -1.57 16 21 C -0.08 0.06 8.38 -39.56 -0.33 -0.27 16 22 C -0.14 0.41 7.28 -25.92 -0.19 0.22 16 23 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 24 F -0.13 -0.25 16.65 2.25 0.04 -0.21 16 25 C -0.04 -0.03 9.75 -39.26 -0.38 -0.42 16 26 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 27 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 29 H -0.26 0.00 7.11 56.52 0.40 0.41 16 30 H 0.16 -0.33 4.88 -52.49 -0.26 -0.59 16 31 H 0.41 -0.81 8.17 -40.82 -0.33 -1.15 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 34 H 0.14 -0.53 8.05 -52.48 -0.42 -0.96 16 35 H 0.15 -0.32 8.06 -52.48 -0.42 -0.74 16 36 H 0.14 -0.33 6.67 -52.49 -0.35 -0.68 16 37 H 0.10 -0.31 7.71 -51.93 -0.40 -0.71 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.15 -0.02 8.06 -52.49 -0.42 -0.44 16 LS Contribution 352.31 15.07 5.31 5.31 Total: 0.00 -6.33 352.31 -11.51 -17.84 By element: Atomic # 1 Polarization: -5.68 SS G_CDS: -3.80 Total: -9.48 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -5.69 Total: -4.00 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.40 Total: -0.51 kcal Atomic # 8 Polarization: -0.02 SS G_CDS: -0.45 Total: -0.47 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.08 Total: -0.57 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.07 Total: -6.53 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.48 Total: -1.57 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -6.33 -11.51 -17.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10156536_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.459 kcal (2) G-P(sol) polarization free energy of solvation -6.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds