Wall clock time and date at job start Mon Mar 8 2021 04:36:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47605 * 2 1 4 4 C 1.50700 * 109.46923 * 120.00336 * 2 1 3 5 5 C 1.38608 * 120.72512 * 64.99250 * 4 2 1 6 6 N 1.32278 * 119.19924 * 180.02562 * 5 4 2 7 7 C 1.32490 * 120.74223 * 0.02562 * 6 5 4 8 8 N 1.38404 * 119.21801 * 180.02562 * 7 6 5 9 9 C 1.46503 * 119.99718 * 180.02562 * 8 7 6 10 10 H 1.08997 * 112.85338 * 23.79968 * 9 8 7 11 11 C 1.53777 * 113.61206 * 154.99927 * 9 8 7 12 12 C 1.53782 * 87.08372 * 89.19575 * 11 9 8 13 13 H 1.08996 * 113.61349 * 270.80018 * 12 11 9 14 14 C 1.50696 * 113.61434 * 139.97892 * 12 11 9 15 15 C 1.38246 * 119.99153 * 121.53459 * 14 12 11 16 16 C 1.38220 * 120.00976 * 180.25733 * 15 14 12 17 17 C 1.38318 * 119.99127 * 359.50747 * 16 15 14 18 18 Br 1.89101 * 120.01169 * 180.23698 * 17 16 15 19 19 C 1.38329 * 119.98140 * 0.51114 * 17 16 15 20 20 C 1.38219 * 119.98665 * 359.72333 * 19 17 16 21 21 C 1.53784 * 87.17184 * 25.39180 * 12 11 9 22 22 N 1.32500 * 121.56238 * 0.26915 * 7 6 5 23 23 C 1.32276 * 120.74110 * 359.44802 * 22 7 6 24 24 H 0.96696 * 113.99640 * 300.00558 * 1 2 3 25 25 H 1.08998 * 109.47127 * 239.99356 * 2 1 3 26 26 H 1.48500 * 109.99961 * 178.67875 * 3 2 1 27 27 H 1.48495 * 110.00012 * 300.00101 * 3 2 1 28 28 H 1.07997 * 120.39554 * 0.05187 * 5 4 2 29 29 H 0.96997 * 120.00234 * 359.97438 * 8 7 6 30 30 H 1.09000 * 113.61771 * 334.64927 * 11 9 8 31 31 H 1.09004 * 113.69307 * 203.75566 * 11 9 8 32 32 H 1.08002 * 119.98964 * 359.97130 * 15 14 12 33 33 H 1.08004 * 120.00109 * 179.74659 * 16 15 14 34 34 H 1.08001 * 120.00621 * 179.74486 * 19 17 16 35 35 H 1.08005 * 119.99467 * 179.97438 * 20 19 17 36 36 H 1.09000 * 113.61700 * 89.15368 * 21 12 11 37 37 H 1.08998 * 113.61357 * 220.06059 * 21 12 11 38 38 H 1.08006 * 120.40230 * 180.29522 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4141 6 7 2.1468 -2.6566 2.5056 7 6 2.8223 -1.9723 3.4170 8 7 3.2837 -2.6248 4.5471 9 6 4.0321 -1.8845 5.5661 10 1 3.8191 -0.8156 5.5546 11 6 3.9525 -2.5136 6.9670 12 6 5.1924 -3.3376 6.5816 13 1 4.9539 -4.2870 6.1021 14 6 6.1929 -3.4815 7.6992 15 6 6.5517 -4.7390 8.1479 16 6 7.4653 -4.8712 9.1766 17 6 8.0284 -3.7456 9.7503 18 35 9.2835 -3.9261 11.1532 19 6 7.6688 -2.4876 9.3013 20 6 6.7515 -2.3561 8.2759 21 6 5.5356 -2.2149 5.5883 22 7 3.0626 -0.6771 3.2746 23 6 2.6410 -0.0249 2.2038 24 1 -0.3932 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 3.5348 1.7701 0.0322 27 1 1.5617 2.4678 -1.2084 28 1 1.1424 -2.6265 0.6746 29 1 3.1109 -3.5719 4.6648 30 1 3.0587 -3.1173 7.1245 31 1 4.1330 -1.8056 7.7760 32 1 6.1145 -5.6179 7.6976 33 1 7.7424 -5.8536 9.5298 34 1 8.1051 -1.6083 9.7518 35 1 6.4703 -1.3739 7.9255 36 1 6.1500 -1.4240 6.0186 37 1 5.9181 -2.5778 4.6343 38 1 2.8440 1.0299 2.0911 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10390342_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:14 Heat of formation + Delta-G solvation = 87.232516 kcal Electronic energy + Delta-G solvation = -22640.842603 eV Core-core repulsion = 19111.304423 eV Total energy + Delta-G solvation = -3529.538180 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.037 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.18460 -41.29856 -39.43514 -38.03922 -35.63668 -34.71725 -33.33908 -32.16582 -31.94497 -30.27929 -26.96445 -26.82660 -26.10783 -25.40323 -23.97641 -23.27387 -22.42806 -20.38371 -19.62053 -18.59854 -18.05487 -17.94860 -16.81760 -16.62800 -16.37934 -16.19837 -16.00226 -15.80145 -15.64382 -15.14134 -14.81753 -14.61014 -14.55908 -14.38787 -14.09455 -13.74928 -13.59438 -13.20074 -12.95346 -12.50547 -12.30080 -12.23385 -11.97390 -11.86743 -11.78956 -11.55297 -11.37041 -11.23063 -11.20046 -10.59807 -10.08052 -10.04055 -9.55686 -9.14819 -5.13379 0.00021 0.04008 0.13440 0.25299 0.66591 1.20167 1.54493 1.71458 1.90819 2.49384 2.78565 3.08238 3.32577 3.38240 3.50523 3.54705 3.60233 3.68351 3.71749 3.73400 3.82443 3.85577 4.05121 4.16309 4.25278 4.33242 4.47067 4.50672 4.57494 4.63513 4.66491 4.71160 4.82262 4.87725 4.93429 4.98489 5.16571 5.17063 5.27565 5.49394 5.74188 5.76509 5.97881 6.36113 6.49243 7.26010 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.294 4.294 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.136 3.864 10 H 0.112 0.888 11 C -0.136 4.136 12 C -0.077 4.077 13 H 0.099 0.901 14 C -0.055 4.055 15 C -0.111 4.111 16 C -0.088 4.088 17 C -0.095 4.095 18 Br -0.051 7.051 19 C -0.087 4.087 20 C -0.111 4.111 21 C -0.145 4.145 22 N -0.560 5.560 23 C 0.200 3.800 24 H 0.379 0.621 25 H 0.116 0.884 26 H -0.255 1.255 27 H -0.251 1.251 28 H 0.170 0.830 29 H 0.415 0.585 30 H 0.078 0.922 31 H 0.101 0.899 32 H 0.131 0.869 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.097 0.903 37 H 0.074 0.926 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.660 2.033 0.701 2.717 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.159 4.159 3 Si 0.582 3.418 4 C -0.302 4.302 5 C 0.055 3.945 6 N -0.290 5.290 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.030 3.970 10 H 0.130 0.870 11 C -0.174 4.174 12 C -0.096 4.096 13 H 0.118 0.882 14 C -0.055 4.055 15 C -0.129 4.129 16 C -0.108 4.108 17 C -0.174 4.174 18 Br 0.035 6.965 19 C -0.107 4.107 20 C -0.130 4.130 21 C -0.183 4.183 22 N -0.282 5.282 23 C 0.033 3.967 24 H 0.226 0.774 25 H 0.133 0.867 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.187 0.813 29 H 0.253 0.747 30 H 0.097 0.903 31 H 0.120 0.880 32 H 0.149 0.851 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.115 0.885 37 H 0.093 0.907 38 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -0.173 1.866 1.245 2.250 hybrid contribution -0.417 -0.675 -1.141 1.390 sum -0.590 1.191 0.104 1.333 Atomic orbital electron populations 1.86515 1.17121 1.81636 1.49277 1.24703 0.85116 1.09635 0.96408 0.95018 0.81094 0.77742 0.87990 1.21722 1.08979 0.97851 1.01640 1.22843 0.89116 0.90979 0.91529 1.67978 1.16615 1.39998 1.04451 1.19338 0.86932 0.85507 0.86859 1.43811 1.58053 1.11821 1.17662 1.21876 0.91054 0.97578 0.86505 0.87009 1.23464 0.97807 0.99530 0.96637 1.21662 0.94372 0.99184 0.94336 0.88246 1.19842 0.96391 0.93088 0.96204 1.21103 0.97681 0.97378 0.96786 1.21151 0.96037 0.97820 0.95756 1.21857 1.00539 0.96358 0.98676 1.96780 1.55894 1.98438 1.45423 1.21143 0.97109 0.95972 0.96497 1.21031 0.96904 0.98913 0.96160 1.23646 0.96911 0.98209 0.99577 1.67900 1.26895 1.08268 1.25150 1.22775 0.88120 0.99213 0.86638 0.77360 0.86710 1.17974 1.17512 0.81260 0.74731 0.90291 0.88039 0.85137 0.84934 0.84876 0.84915 0.88468 0.90717 0.81646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.55 12.85 -35.23 -0.45 0.10 16 2 C -0.05 0.07 2.83 36.01 0.10 0.17 16 3 Si 0.68 -1.52 29.88 -169.99 -5.08 -6.60 16 4 C -0.29 0.16 5.36 -104.35 -0.56 -0.40 16 5 C 0.22 0.14 10.99 -17.22 -0.19 -0.05 16 6 N -0.57 -1.27 10.46 -13.93 -0.15 -1.41 16 7 C 0.57 1.03 8.43 -322.81 -2.72 -1.69 16 8 N -0.68 0.25 5.41 -54.91 -0.30 -0.04 16 9 C 0.14 -0.23 4.34 -67.02 -0.29 -0.52 16 10 H 0.11 -0.11 7.36 -51.93 -0.38 -0.49 16 11 C -0.14 0.39 7.29 -25.92 -0.19 0.20 16 12 C -0.08 0.18 3.86 -90.96 -0.35 -0.17 16 13 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 14 C -0.05 0.06 5.29 -104.62 -0.55 -0.50 16 15 C -0.11 0.06 9.71 -39.59 -0.38 -0.32 16 16 C -0.09 -0.03 9.79 -39.56 -0.39 -0.41 16 17 C -0.09 -0.09 6.22 -39.52 -0.25 -0.34 16 18 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 19 C -0.09 0.00 9.79 -39.55 -0.39 -0.39 16 20 C -0.11 0.11 8.53 -39.59 -0.34 -0.22 16 21 C -0.14 0.28 7.27 -25.82 -0.19 0.09 16 22 N -0.56 -0.83 9.13 -13.93 -0.13 -0.96 16 23 C 0.20 -0.07 9.92 -17.22 -0.17 -0.24 16 24 H 0.38 -1.77 8.70 45.56 0.40 -1.37 16 25 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 26 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 27 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 28 H 0.17 -0.18 8.06 -52.49 -0.42 -0.60 16 29 H 0.41 -0.56 8.82 -40.82 -0.36 -0.92 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.10 -0.33 7.64 -51.93 -0.40 -0.72 16 32 H 0.13 -0.29 8.05 -52.49 -0.42 -0.72 16 33 H 0.13 -0.10 8.06 -52.48 -0.42 -0.52 16 34 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 35 H 0.13 -0.38 6.73 -52.48 -0.35 -0.73 16 36 H 0.10 -0.25 6.40 -51.93 -0.33 -0.58 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.17 -0.50 5.07 -52.48 -0.27 -0.77 16 LS Contribution 340.53 15.07 5.13 5.13 Total: 0.00 -6.44 340.53 -14.38 -20.81 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -4.26 Total: -9.88 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -6.85 Total: -4.79 kcal Atomic # 7 Polarization: -1.84 SS G_CDS: -0.57 Total: -2.41 kcal Atomic # 8 Polarization: 0.55 SS G_CDS: -0.45 Total: 0.10 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.08 Total: -6.60 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -6.44 -14.38 -20.81 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10390342_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.047 kcal (2) G-P(sol) polarization free energy of solvation -6.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.814 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds