Wall clock time and date at job start Mon Mar 8 2021 04:36:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47605 * 2 1 4 4 C 1.50700 * 109.46923 * 120.00336 * 2 1 3 5 5 C 1.38608 * 120.72512 * 64.99250 * 4 2 1 6 6 N 1.32278 * 119.19924 * 180.02562 * 5 4 2 7 7 C 1.32490 * 120.74223 * 0.02562 * 6 5 4 8 8 N 1.38404 * 119.21801 * 180.02562 * 7 6 5 9 9 C 1.46503 * 119.99718 * 180.02562 * 8 7 6 10 10 H 1.08997 * 112.85338 * 23.79968 * 9 8 7 11 11 C 1.53777 * 113.61206 * 154.99927 * 9 8 7 12 12 C 1.53782 * 87.08372 * 89.19575 * 11 9 8 13 13 H 1.08996 * 113.61349 * 270.80018 * 12 11 9 14 14 C 1.50696 * 113.61434 * 139.97892 * 12 11 9 15 15 C 1.38246 * 119.99153 * 121.53459 * 14 12 11 16 16 C 1.38220 * 120.00976 * 180.25733 * 15 14 12 17 17 C 1.38318 * 119.99127 * 359.50747 * 16 15 14 18 18 Br 1.89101 * 120.01169 * 180.23698 * 17 16 15 19 19 C 1.38329 * 119.98140 * 0.51114 * 17 16 15 20 20 C 1.38219 * 119.98665 * 359.72333 * 19 17 16 21 21 C 1.53784 * 87.17184 * 25.39180 * 12 11 9 22 22 N 1.32500 * 121.56238 * 0.26915 * 7 6 5 23 23 C 1.32276 * 120.74110 * 359.44802 * 22 7 6 24 24 H 0.96696 * 113.99640 * 300.00558 * 1 2 3 25 25 H 1.08998 * 109.47127 * 239.99356 * 2 1 3 26 26 H 1.48500 * 109.99961 * 178.67875 * 3 2 1 27 27 H 1.48495 * 110.00012 * 300.00101 * 3 2 1 28 28 H 1.07997 * 120.39554 * 0.05187 * 5 4 2 29 29 H 0.96997 * 120.00234 * 359.97438 * 8 7 6 30 30 H 1.09000 * 113.61771 * 334.64927 * 11 9 8 31 31 H 1.09004 * 113.69307 * 203.75566 * 11 9 8 32 32 H 1.08002 * 119.98964 * 359.97130 * 15 14 12 33 33 H 1.08004 * 120.00109 * 179.74659 * 16 15 14 34 34 H 1.08001 * 120.00621 * 179.74486 * 19 17 16 35 35 H 1.08005 * 119.99467 * 179.97438 * 20 19 17 36 36 H 1.09000 * 113.61700 * 89.15368 * 21 12 11 37 37 H 1.08998 * 113.61357 * 220.06059 * 21 12 11 38 38 H 1.08006 * 120.40230 * 180.29522 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4141 6 7 2.1468 -2.6566 2.5056 7 6 2.8223 -1.9723 3.4170 8 7 3.2837 -2.6248 4.5471 9 6 4.0321 -1.8845 5.5661 10 1 3.8191 -0.8156 5.5546 11 6 3.9525 -2.5136 6.9670 12 6 5.1924 -3.3376 6.5816 13 1 4.9539 -4.2870 6.1021 14 6 6.1929 -3.4815 7.6992 15 6 6.5517 -4.7390 8.1479 16 6 7.4653 -4.8712 9.1766 17 6 8.0284 -3.7456 9.7503 18 35 9.2835 -3.9261 11.1532 19 6 7.6688 -2.4876 9.3013 20 6 6.7515 -2.3561 8.2759 21 6 5.5356 -2.2149 5.5883 22 7 3.0626 -0.6771 3.2746 23 6 2.6410 -0.0249 2.2038 24 1 -0.3932 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 3.5348 1.7701 0.0322 27 1 1.5617 2.4678 -1.2084 28 1 1.1424 -2.6265 0.6746 29 1 3.1109 -3.5719 4.6648 30 1 3.0587 -3.1173 7.1245 31 1 4.1330 -1.8056 7.7760 32 1 6.1145 -5.6179 7.6976 33 1 7.7424 -5.8536 9.5298 34 1 8.1051 -1.6083 9.7518 35 1 6.4703 -1.3739 7.9255 36 1 6.1500 -1.4240 6.0186 37 1 5.9181 -2.5778 4.6343 38 1 2.8440 1.0299 2.0911 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10390342_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:13 Heat of formation + Delta-G solvation = 93.881607 kcal Electronic energy + Delta-G solvation = -22640.554276 eV Core-core repulsion = 19111.304423 eV Total energy + Delta-G solvation = -3529.249854 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.037 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.16052 -41.19275 -39.34735 -37.94373 -35.57013 -34.73143 -33.30762 -32.10009 -31.90123 -30.25085 -26.87838 -26.67242 -26.05033 -25.33689 -23.90266 -23.23750 -22.35168 -20.26431 -19.57103 -18.54045 -17.98104 -17.86312 -16.71074 -16.58357 -16.29051 -16.12936 -15.93993 -15.75153 -15.56591 -15.06421 -14.72481 -14.54195 -14.50245 -14.29010 -14.08119 -13.63795 -13.42276 -13.14390 -12.87848 -12.40760 -12.27098 -12.19975 -11.90192 -11.84531 -11.76573 -11.52600 -11.28889 -11.23321 -11.10236 -10.51984 -10.04044 -10.01886 -9.52408 -9.10099 -4.98571 0.03498 0.06395 0.13406 0.31607 0.64892 1.33210 1.65640 1.78598 2.00532 2.55884 2.78264 3.14792 3.47765 3.54884 3.62005 3.67619 3.70880 3.74481 3.80915 3.83839 3.94760 3.98048 4.20453 4.24333 4.35780 4.41841 4.56866 4.65032 4.70605 4.75147 4.79160 4.84799 4.93225 5.03159 5.05995 5.12395 5.22888 5.23890 5.36773 5.59018 5.80255 5.83175 6.05133 6.39519 6.79843 7.26554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.048 4.048 3 Si 0.769 3.231 4 C -0.288 4.288 5 C 0.211 3.789 6 N -0.591 5.591 7 C 0.555 3.445 8 N -0.675 5.675 9 C 0.136 3.864 10 H 0.106 0.894 11 C -0.126 4.126 12 C -0.071 4.071 13 H 0.104 0.896 14 C -0.056 4.056 15 C -0.117 4.117 16 C -0.100 4.100 17 C -0.111 4.111 18 Br -0.063 7.063 19 C -0.097 4.097 20 C -0.112 4.112 21 C -0.140 4.140 22 N -0.574 5.574 23 C 0.196 3.804 24 H 0.395 0.605 25 H 0.113 0.887 26 H -0.284 1.284 27 H -0.297 1.297 28 H 0.181 0.819 29 H 0.418 0.582 30 H 0.081 0.919 31 H 0.109 0.891 32 H 0.145 0.855 33 H 0.137 0.863 34 H 0.140 0.860 35 H 0.152 0.848 36 H 0.105 0.895 37 H 0.060 0.940 38 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.197 2.541 0.673 3.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.675 3.325 4 C -0.296 4.296 5 C 0.044 3.956 6 N -0.313 5.313 7 C 0.198 3.802 8 N -0.310 5.310 9 C 0.030 3.970 10 H 0.124 0.876 11 C -0.164 4.164 12 C -0.089 4.089 13 H 0.122 0.878 14 C -0.056 4.056 15 C -0.136 4.136 16 C -0.119 4.119 17 C -0.190 4.190 18 Br 0.022 6.978 19 C -0.117 4.117 20 C -0.130 4.130 21 C -0.179 4.179 22 N -0.296 5.296 23 C 0.028 3.972 24 H 0.245 0.755 25 H 0.130 0.870 26 H -0.211 1.211 27 H -0.225 1.225 28 H 0.198 0.802 29 H 0.256 0.744 30 H 0.100 0.900 31 H 0.128 0.872 32 H 0.163 0.837 33 H 0.155 0.845 34 H 0.158 0.842 35 H 0.169 0.831 36 H 0.123 0.877 37 H 0.079 0.921 38 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -0.726 2.359 1.246 2.764 hybrid contribution -0.277 -0.816 -1.209 1.485 sum -1.003 1.543 0.037 1.840 Atomic orbital electron populations 1.86483 1.17218 1.82078 1.50466 1.24806 0.85122 1.10150 0.95847 0.93978 0.77857 0.75101 0.85577 1.21771 1.08579 0.97433 1.01800 1.23131 0.89225 0.91748 0.91489 1.67988 1.17486 1.40663 1.05174 1.19606 0.87308 0.85901 0.87396 1.43896 1.57778 1.12015 1.17342 1.21898 0.91024 0.97253 0.86808 0.87600 1.23418 0.97566 0.99362 0.96029 1.21638 0.94181 0.99371 0.93747 0.87796 1.20019 0.96353 0.92976 0.96271 1.21336 0.97429 0.98262 0.96531 1.21301 0.96468 0.97943 0.96224 1.21981 1.00971 0.97097 0.98934 1.96753 1.56446 1.98480 1.46084 1.21326 0.97520 0.95921 0.96947 1.21264 0.96304 0.99868 0.95600 1.23623 0.96753 0.98543 0.99017 1.67950 1.27472 1.08246 1.25930 1.23199 0.87560 1.00231 0.86162 0.75532 0.86986 1.21072 1.22483 0.80239 0.74389 0.90042 0.87249 0.83689 0.84521 0.84183 0.83055 0.87687 0.92124 0.79352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.48 12.85 -148.98 -1.91 -0.43 16 2 C -0.05 0.17 2.83 71.24 0.20 0.37 16 3 Si 0.77 -3.75 29.88 68.60 2.05 -1.70 16 4 C -0.29 0.40 5.36 -19.69 -0.11 0.29 16 5 C 0.21 0.31 10.99 84.71 0.93 1.24 16 6 N -0.59 -2.89 10.46 -197.98 -2.07 -4.96 16 7 C 0.55 2.14 8.43 261.49 2.20 4.35 16 8 N -0.67 0.44 5.41 -327.64 -1.77 -1.33 16 9 C 0.14 -0.52 4.34 45.58 0.20 -0.32 16 10 H 0.11 -0.24 7.36 -2.39 -0.02 -0.25 16 11 C -0.13 0.83 7.29 31.12 0.23 1.06 16 12 C -0.07 0.39 3.86 -11.01 -0.04 0.35 16 13 H 0.10 -0.64 8.09 -2.39 -0.02 -0.66 16 14 C -0.06 0.15 5.29 -19.86 -0.11 0.05 16 15 C -0.12 0.17 9.71 22.27 0.22 0.39 16 16 C -0.10 -0.09 9.79 22.28 0.22 0.13 16 17 C -0.11 -0.27 6.22 22.31 0.14 -0.13 16 18 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.91 16 19 C -0.10 -0.01 9.79 22.29 0.22 0.21 16 20 C -0.11 0.31 8.53 22.27 0.19 0.50 16 21 C -0.14 0.61 7.27 31.18 0.23 0.84 16 22 N -0.57 -1.64 9.13 -197.98 -1.81 -3.45 16 23 C 0.20 -0.23 9.92 84.71 0.84 0.61 16 24 H 0.39 -4.05 8.70 -74.06 -0.64 -4.70 16 25 H 0.11 -0.33 7.96 -2.39 -0.02 -0.34 16 26 H -0.28 -0.01 7.11 99.48 0.71 0.70 16 27 H -0.30 -0.90 7.11 99.48 0.71 -0.19 16 28 H 0.18 -0.34 8.06 -2.91 -0.02 -0.36 16 29 H 0.42 -1.06 8.82 -92.71 -0.82 -1.88 16 30 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 31 H 0.11 -0.86 7.64 -2.38 -0.02 -0.87 16 32 H 0.15 -0.74 8.05 -2.91 -0.02 -0.76 16 33 H 0.14 -0.12 8.06 -2.91 -0.02 -0.14 16 34 H 0.14 -0.29 8.06 -2.91 -0.02 -0.32 16 35 H 0.15 -1.07 6.73 -2.91 -0.02 -1.09 16 36 H 0.10 -0.63 6.40 -2.39 -0.02 -0.64 16 37 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 38 H 0.19 -1.35 5.07 -2.91 -0.01 -1.36 16 Total: 0.00 -15.41 340.53 -0.95 -16.36 By element: Atomic # 1 Polarization: -13.21 SS G_CDS: -0.30 Total: -13.52 kcal Atomic # 6 Polarization: 4.38 SS G_CDS: 5.56 Total: 9.93 kcal Atomic # 7 Polarization: -4.09 SS G_CDS: -5.65 Total: -9.74 kcal Atomic # 8 Polarization: 1.48 SS G_CDS: -1.91 Total: -0.43 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.05 Total: -1.70 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.91 kcal Total: -15.41 -0.95 -16.36 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10390342_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.246 kcal (2) G-P(sol) polarization free energy of solvation -15.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.364 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.882 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds