Wall clock time and date at job start Mon Mar 8 2021 04:36:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47059 * 2 1 4 4 C 1.50697 * 109.47362 * 240.00083 * 2 1 3 5 5 C 1.38017 * 120.33713 * 119.99271 * 4 2 1 6 6 N 1.31972 * 120.85816 * 180.02562 * 5 4 2 7 7 C 1.32396 * 121.62200 * 359.97438 * 6 5 4 8 8 N 1.39005 * 119.70681 * 179.97438 * 7 6 5 9 9 C 1.46504 * 119.99841 * 180.02562 * 8 7 6 10 10 H 1.08999 * 112.85136 * 336.19733 * 9 8 7 11 11 C 1.53779 * 113.61484 * 107.50129 * 9 8 7 12 12 C 1.53785 * 87.08093 * 89.11287 * 11 9 8 13 13 H 1.09002 * 113.61570 * 270.88522 * 12 11 9 14 14 C 1.50701 * 113.69000 * 139.98979 * 12 11 9 15 15 C 1.38240 * 119.99122 * 320.66830 * 14 12 11 16 16 C 1.38215 * 120.00834 * 179.72913 * 15 14 12 17 17 C 1.38330 * 119.99232 * 0.53842 * 16 15 14 18 18 Br 1.89096 * 120.01048 * 179.70796 * 17 16 15 19 19 C 1.38328 * 119.97598 * 359.72965 * 17 16 15 20 20 C 1.38213 * 119.99042 * 0.02562 * 19 17 16 21 21 C 1.53781 * 87.08241 * 25.43228 * 12 11 9 22 22 C 1.39147 * 120.58871 * 0.27624 * 7 6 5 23 23 C 1.38296 * 119.09363 * 359.47432 * 22 7 6 24 24 H 0.96697 * 114.00415 * 60.00058 * 1 2 3 25 25 H 1.09001 * 109.47263 * 119.99758 * 2 1 3 26 26 H 1.48501 * 110.00040 * 59.99724 * 3 2 1 27 27 H 1.48496 * 110.00389 * 181.31904 * 3 2 1 28 28 H 1.08000 * 119.57249 * 0.02895 * 5 4 2 29 29 H 0.96996 * 120.00206 * 359.97438 * 8 7 6 30 30 H 1.09003 * 113.61775 * 334.57164 * 11 9 8 31 31 H 1.08996 * 113.61960 * 203.65890 * 11 9 8 32 32 H 1.08000 * 119.99200 * 359.97158 * 15 14 12 33 33 H 1.08005 * 120.00691 * 180.29225 * 16 15 14 34 34 H 1.07999 * 120.00030 * 180.02562 * 19 17 16 35 35 H 1.08002 * 119.99307 * 179.97438 * 20 19 17 36 36 H 1.09005 * 113.61302 * 89.11252 * 21 12 11 37 37 H 1.08993 * 113.62030 * 220.02098 * 21 12 11 38 38 H 1.07997 * 120.44907 * 179.69993 * 22 7 6 39 39 H 1.07995 * 120.74833 * 180.26208 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7252 -0.0463 -2.1435 6 7 3.1704 -0.6582 -3.2247 7 6 2.8768 -1.9245 -3.4762 8 7 3.3668 -2.5296 -4.6278 9 6 3.0455 -3.9303 -4.9126 10 1 2.7934 -4.4974 -4.0166 11 6 2.0389 -4.1101 -6.0612 12 6 3.2477 -4.1385 -7.0114 13 1 3.5420 -3.1533 -7.3731 14 6 3.1252 -5.1554 -8.1168 15 6 2.5752 -6.3966 -7.8562 16 6 2.4575 -7.3275 -8.8710 17 6 2.9003 -7.0210 -10.1452 18 35 2.7471 -8.2972 -11.5322 19 6 3.4557 -5.7809 -10.4043 20 6 3.5683 -4.8488 -9.3899 21 6 4.0783 -4.6282 -5.8133 22 6 2.0771 -2.6532 -2.6012 23 6 1.6003 -2.0401 -1.4570 24 1 -0.3934 0.4417 -0.7650 25 1 1.7924 -0.5138 0.8900 26 1 1.5614 2.4679 1.2085 27 1 3.5345 1.7704 -0.0321 28 1 2.9854 0.9876 -1.9710 29 1 3.9208 -2.0242 -5.2431 30 1 1.3872 -3.2490 -6.2096 31 1 1.4935 -5.0529 -6.0203 32 1 2.2339 -6.6375 -6.8602 33 1 2.0235 -8.2955 -8.6684 34 1 3.8011 -5.5410 -11.3990 35 1 4.0023 -3.8807 -9.5921 36 1 4.0904 -5.7127 -5.7045 37 1 5.0729 -4.1855 -5.7613 38 1 1.8351 -3.6846 -2.8111 39 1 0.9810 -2.5817 -0.7575 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10390342_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:18 Heat of formation + Delta-G solvation = 70.896414 kcal Electronic energy + Delta-G solvation = -22497.863459 eV Core-core repulsion = 19033.042804 eV Total energy + Delta-G solvation = -3464.820656 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.042 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -41.78764 -41.05436 -39.44270 -37.86571 -35.49103 -33.51415 -33.12488 -32.15274 -31.29452 -30.20794 -26.93902 -26.73863 -25.70497 -24.72568 -23.98955 -22.91314 -22.22894 -20.26237 -19.08366 -18.45029 -17.94408 -17.44181 -16.76303 -16.53236 -16.36003 -16.15365 -15.93829 -15.72550 -15.34455 -14.93916 -14.79783 -14.57477 -14.45636 -14.19500 -14.04977 -13.72119 -13.64376 -13.36391 -12.97527 -12.56338 -12.36191 -12.27524 -12.00193 -11.98688 -11.54975 -11.42128 -11.24969 -11.11761 -10.74649 -10.40417 -10.39727 -10.10675 -9.57923 -8.74756 -5.04027 -0.02225 0.22033 0.22870 0.40698 0.64581 1.30423 1.62291 1.94485 1.97891 2.46528 2.82427 3.23283 3.44381 3.45920 3.49151 3.57182 3.67295 3.75994 3.76357 3.82759 3.92192 4.01861 4.05489 4.21083 4.27326 4.32086 4.36796 4.50360 4.52471 4.60386 4.62217 4.71084 4.76133 4.83057 4.88670 4.95736 5.01225 5.13874 5.15129 5.30258 5.45632 5.51011 5.71603 5.96598 6.47472 6.58290 7.12815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.235 4.235 5 C 0.156 3.844 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.129 3.871 10 H 0.100 0.900 11 C -0.148 4.148 12 C -0.075 4.075 13 H 0.101 0.899 14 C -0.055 4.055 15 C -0.112 4.112 16 C -0.088 4.088 17 C -0.095 4.095 18 Br -0.050 7.050 19 C -0.087 4.087 20 C -0.110 4.110 21 C -0.136 4.136 22 C -0.238 4.238 23 C -0.006 4.006 24 H 0.379 0.621 25 H 0.112 0.888 26 H -0.253 1.253 27 H -0.256 1.256 28 H 0.155 0.845 29 H 0.407 0.593 30 H 0.078 0.922 31 H 0.096 0.904 32 H 0.132 0.868 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.135 0.865 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.580 0.136 -0.721 0.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.240 4.240 5 C -0.002 4.002 6 N -0.256 5.256 7 C 0.174 3.826 8 N -0.337 5.337 9 C 0.022 3.978 10 H 0.118 0.882 11 C -0.187 4.187 12 C -0.093 4.093 13 H 0.119 0.881 14 C -0.056 4.056 15 C -0.131 4.131 16 C -0.107 4.107 17 C -0.174 4.174 18 Br 0.035 6.965 19 C -0.107 4.107 20 C -0.129 4.129 21 C -0.174 4.174 22 C -0.262 4.262 23 C -0.031 4.031 24 H 0.226 0.774 25 H 0.129 0.871 26 H -0.178 1.178 27 H -0.181 1.181 28 H 0.172 0.828 29 H 0.243 0.757 30 H 0.097 0.903 31 H 0.115 0.885 32 H 0.150 0.850 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.149 0.851 36 H 0.119 0.881 37 H 0.098 0.902 38 H 0.152 0.848 39 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.411 0.199 -0.872 0.984 hybrid contribution -0.125 -0.655 0.621 0.911 sum 0.286 -0.456 -0.251 0.594 Atomic orbital electron populations 1.86489 1.17327 1.81671 1.49283 1.24780 0.85021 1.09668 0.96957 0.94852 0.81082 0.78148 0.87521 1.21004 1.05840 0.96696 1.00454 1.22211 0.91517 0.98559 0.87891 1.67128 1.27240 1.09079 1.22143 1.18357 0.89164 0.88462 0.86592 1.44147 1.55983 1.11066 1.22468 1.21866 0.96414 0.81730 0.97776 0.88191 1.23672 0.96520 1.03503 0.95045 1.21614 0.97840 0.97752 0.92101 0.88122 1.19836 0.96780 0.94602 0.94365 1.21010 0.99842 0.92936 0.99263 1.21140 0.98361 1.00120 0.91110 1.21864 1.06258 0.95327 0.93959 1.96784 1.97330 1.55069 1.47295 1.21159 0.97651 0.91764 1.00156 1.21104 1.00018 0.99615 0.92150 1.23451 0.98509 1.01575 0.93868 1.21504 1.05412 1.01859 0.97464 1.21198 0.93845 0.93197 0.94899 0.77420 0.87063 1.17800 1.18101 0.82836 0.75714 0.90321 0.88538 0.85010 0.84887 0.84903 0.85099 0.88149 0.90194 0.84760 0.84609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.00 12.78 -35.23 -0.45 -0.45 16 2 C -0.05 0.02 2.84 36.00 0.10 0.12 16 3 Si 0.68 -0.76 29.82 -169.99 -5.07 -5.83 16 4 C -0.23 -0.07 5.40 -104.46 -0.56 -0.63 16 5 C 0.16 0.13 9.84 -17.57 -0.17 -0.04 16 6 N -0.54 -1.22 10.39 -12.44 -0.13 -1.35 16 7 C 0.41 0.42 7.65 -155.02 -1.19 -0.76 16 8 N -0.70 0.78 5.44 -53.13 -0.29 0.49 16 9 C 0.13 -0.38 4.11 -67.11 -0.28 -0.65 16 10 H 0.10 -0.34 6.11 -51.93 -0.32 -0.66 16 11 C -0.15 0.45 7.26 -25.92 -0.19 0.27 16 12 C -0.07 0.22 3.85 -90.96 -0.35 -0.13 16 13 H 0.10 -0.31 8.09 -51.93 -0.42 -0.73 16 14 C -0.06 0.08 5.29 -104.62 -0.55 -0.47 16 15 C -0.11 0.16 8.53 -39.59 -0.34 -0.18 16 16 C -0.09 0.02 9.79 -39.56 -0.39 -0.36 16 17 C -0.09 -0.07 6.22 -39.51 -0.25 -0.31 16 18 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 19 C -0.09 0.00 9.79 -39.56 -0.39 -0.39 16 20 C -0.11 0.10 9.71 -39.59 -0.38 -0.29 16 21 C -0.14 0.46 7.29 -25.92 -0.19 0.27 16 22 C -0.24 -0.02 9.28 -39.22 -0.36 -0.39 16 23 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 24 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 25 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 26 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 27 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 28 H 0.15 -0.17 4.88 -52.49 -0.26 -0.42 16 29 H 0.41 -0.59 8.82 -40.82 -0.36 -0.95 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 31 H 0.10 -0.36 6.41 -51.93 -0.33 -0.70 16 32 H 0.13 -0.45 6.73 -52.49 -0.35 -0.81 16 33 H 0.13 -0.18 8.06 -52.48 -0.42 -0.61 16 34 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 35 H 0.13 -0.33 8.05 -52.49 -0.42 -0.75 16 36 H 0.10 -0.38 7.62 -51.93 -0.40 -0.77 16 37 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.13 -0.24 6.04 -52.49 -0.32 -0.56 16 39 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 LS Contribution 342.82 15.07 5.17 5.17 Total: 0.00 -5.93 342.82 -13.43 -19.36 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -4.50 Total: -10.71 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -5.87 Total: -4.34 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.42 Total: -0.85 kcal Atomic # 8 Polarization: 0.00 SS G_CDS: -0.45 Total: -0.45 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.07 Total: -5.83 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -5.93 -13.43 -19.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10390342_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.261 kcal (2) G-P(sol) polarization free energy of solvation -5.931 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.365 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.896 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds