Wall clock time and date at job start Mon Mar 8 2021 04:36:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86297 * 109.46956 * 2 1 4 4 C 1.50700 * 109.46939 * 240.00268 * 2 1 3 5 5 C 1.33323 * 125.95232 * 299.71580 * 4 2 1 6 6 N 1.32115 * 114.58155 * 180.26254 * 5 4 2 7 7 C 1.29684 * 116.86695 * 0.02562 * 6 5 4 8 8 N 1.38608 * 124.95078 * 179.97438 * 7 6 5 9 9 C 1.46499 * 120.00285 * 0.02562 * 8 7 6 10 10 H 1.09003 * 112.85164 * 336.19725 * 9 8 7 11 11 C 1.53787 * 113.61518 * 107.49616 * 9 8 7 12 12 C 1.53782 * 87.07720 * 89.12178 * 11 9 8 13 13 H 1.08995 * 113.61093 * 270.87767 * 12 11 9 14 14 C 1.50707 * 113.61167 * 139.98368 * 12 11 9 15 15 C 1.38237 * 119.98935 * 322.22032 * 14 12 11 16 16 C 1.38221 * 120.00891 * 179.77148 * 15 14 12 17 17 C 1.38322 * 119.98664 * 0.50496 * 16 15 14 18 18 Br 1.89104 * 120.00923 * 179.76721 * 17 16 15 19 19 C 1.38323 * 119.98271 * 359.75222 * 17 16 15 20 20 C 1.38223 * 119.98873 * 359.97438 * 19 17 16 21 21 C 1.53774 * 87.08392 * 25.43473 * 12 11 9 22 22 S 1.70962 * 110.10209 * 0.02562 * 7 6 5 23 23 H 0.96703 * 113.99607 * 300.00409 * 1 2 3 24 24 H 1.08994 * 109.47173 * 120.00301 * 2 1 3 25 25 H 1.48500 * 110.00514 * 300.00161 * 3 2 1 26 26 H 1.48504 * 110.00298 * 61.32266 * 3 2 1 27 27 H 1.08004 * 122.70982 * 0.22675 * 5 4 2 28 28 H 0.97003 * 120.00312 * 179.97438 * 8 7 6 29 29 H 1.09001 * 113.61346 * 203.66699 * 11 9 8 30 30 H 1.08996 * 113.61323 * 334.57104 * 11 9 8 31 31 H 1.07997 * 119.99594 * 0.02844 * 15 14 12 32 32 H 1.07997 * 120.00650 * 180.23638 * 16 15 14 33 33 H 1.08000 * 120.00642 * 179.97438 * 19 17 16 34 34 H 1.08002 * 119.99196 * 180.02562 * 20 19 17 35 35 H 1.09003 * 113.61585 * 220.02054 * 21 12 11 36 36 H 1.08997 * 113.69703 * 89.12313 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6878 -1.9802 -1.5554 6 7 2.2458 -2.3749 -2.6861 7 6 2.9495 -1.4965 -3.3302 8 7 3.6064 -1.7291 -4.5285 9 6 3.5333 -3.0491 -5.1597 10 1 3.3135 -3.8463 -4.4496 11 6 2.6500 -3.0820 -6.4182 12 6 3.9107 -2.7111 -7.2169 13 1 4.0683 -1.6366 -7.3097 14 6 4.0271 -3.4368 -8.5326 15 6 3.6345 -4.7587 -8.6296 16 6 3.7366 -5.4233 -9.8373 17 6 4.2415 -4.7686 -10.9462 18 35 4.3876 -5.6792 -12.5970 19 6 4.6392 -3.4475 -10.8473 20 6 4.5314 -2.7820 -9.6406 21 6 4.7238 -3.3574 -6.0830 22 16 2.9503 -0.0102 -2.4855 23 1 -0.3933 0.4418 0.7651 24 1 1.7924 -0.5138 0.8899 25 1 1.5615 2.4680 -1.2084 26 1 1.5880 2.4586 1.2243 27 1 1.0838 -2.6338 -0.9435 28 1 4.1139 -1.0177 -4.9495 29 1 2.2605 -4.0728 -6.6525 30 1 1.8811 -2.3096 -6.4324 31 1 3.2440 -5.2710 -7.7628 32 1 3.4263 -6.4549 -9.9139 33 1 5.0338 -2.9360 -11.7128 34 1 4.8415 -1.7503 -9.5634 35 1 5.6292 -2.8072 -5.8264 36 1 4.9021 -4.4233 -6.2243 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10390342_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:21 Heat of formation + Delta-G solvation = 79.920880 kcal Electronic energy + Delta-G solvation = -21049.999637 eV Core-core repulsion = 17674.722558 eV Total energy + Delta-G solvation = -3375.277079 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.998 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.53297 -40.52237 -39.32881 -37.91575 -35.42044 -33.17670 -32.11874 -31.36345 -30.30451 -26.92444 -26.72096 -25.97291 -24.45616 -23.87240 -22.60824 -21.16290 -20.13363 -19.24662 -18.61670 -18.14232 -17.40343 -16.85809 -16.42173 -16.24816 -16.00874 -15.77105 -15.51585 -15.14287 -14.88001 -14.57821 -14.51294 -14.31314 -13.99179 -13.70085 -13.58419 -12.97317 -12.84847 -12.50558 -12.41544 -12.30950 -12.21096 -11.96653 -11.52009 -11.35081 -11.22509 -11.09551 -10.67138 -10.25850 -10.13096 -10.07499 -9.54851 -8.71450 -5.08755 -0.03164 0.00934 0.06982 0.25754 0.67116 0.70379 1.22377 1.52164 1.89271 2.05059 2.10191 2.49969 3.29719 3.33302 3.49408 3.56321 3.67693 3.72501 3.82956 3.86033 3.95791 4.06232 4.25656 4.34060 4.39469 4.50941 4.58882 4.64383 4.67754 4.78624 4.81781 4.89037 4.93498 4.97052 5.16381 5.17593 5.25006 5.49699 5.74755 5.86891 6.04908 6.39101 7.03929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.018 4.018 3 Si 0.650 3.350 4 C -0.260 4.260 5 C 0.118 3.882 6 N -0.547 5.547 7 C 0.325 3.675 8 N -0.676 5.676 9 C 0.137 3.863 10 H 0.109 0.891 11 C -0.145 4.145 12 C -0.077 4.077 13 H 0.099 0.901 14 C -0.055 4.055 15 C -0.111 4.111 16 C -0.087 4.087 17 C -0.095 4.095 18 Br -0.051 7.051 19 C -0.088 4.088 20 C -0.111 4.111 21 C -0.136 4.136 22 S 0.097 5.903 23 H 0.381 0.619 24 H 0.084 0.916 25 H -0.239 1.239 26 H -0.241 1.241 27 H 0.175 0.825 28 H 0.414 0.586 29 H 0.097 0.903 30 H 0.075 0.925 31 H 0.133 0.867 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.131 0.869 35 H 0.078 0.922 36 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.083 1.801 2.406 4.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.131 4.131 3 Si 0.549 3.451 4 C -0.382 4.382 5 C -0.033 4.033 6 N -0.272 5.272 7 C -0.045 4.045 8 N -0.315 5.315 9 C 0.029 3.971 10 H 0.127 0.873 11 C -0.184 4.184 12 C -0.096 4.096 13 H 0.117 0.883 14 C -0.055 4.055 15 C -0.130 4.130 16 C -0.107 4.107 17 C -0.174 4.174 18 Br 0.035 6.965 19 C -0.108 4.108 20 C -0.130 4.130 21 C -0.174 4.174 22 S 0.346 5.654 23 H 0.229 0.771 24 H 0.102 0.898 25 H -0.163 1.163 26 H -0.165 1.165 27 H 0.192 0.808 28 H 0.252 0.748 29 H 0.115 0.885 30 H 0.094 0.906 31 H 0.151 0.849 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.149 0.851 35 H 0.097 0.903 36 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 3.403 2.277 0.780 4.168 hybrid contribution -1.459 -0.215 1.043 1.806 sum 1.944 2.062 1.823 3.369 Atomic orbital electron populations 1.86617 1.17727 1.79965 1.49883 1.23706 0.84113 1.09730 0.95561 0.95266 0.91675 0.75468 0.82672 1.24319 1.12559 0.97944 1.03408 1.21292 0.96981 0.93223 0.91779 1.66462 1.16856 1.33617 1.10281 1.23666 0.95243 0.93461 0.92124 1.43666 1.54477 1.13854 1.19496 1.21877 0.96317 0.84941 0.93947 0.87323 1.23627 0.96531 1.03236 0.95042 1.21662 0.97826 0.99501 0.90562 0.88261 1.19832 0.96867 0.93981 0.94844 1.21039 1.00239 0.94243 0.97479 1.21144 0.97767 1.00280 0.91511 1.21858 1.06701 0.96124 0.92741 1.96780 1.97333 1.76772 1.25649 1.21150 0.98370 0.92646 0.98609 1.21090 0.99738 1.00242 0.91889 1.23466 0.97328 1.02516 0.94095 1.83937 1.50910 1.13236 1.17276 0.77077 0.89790 1.16309 1.16459 0.80767 0.74828 0.88516 0.90580 0.84918 0.84881 0.84933 0.85141 0.90285 0.88087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.55 12.85 -35.23 -0.45 -1.01 16 2 C -0.02 0.00 2.98 36.01 0.11 0.11 16 3 Si 0.65 -0.42 31.05 -169.99 -5.28 -5.70 16 4 C -0.26 -0.43 5.78 -36.02 -0.21 -0.63 16 5 C 0.12 0.30 11.22 -19.15 -0.21 0.08 16 6 N -0.55 -1.73 9.83 -15.21 -0.15 -1.88 16 7 C 0.33 0.44 8.09 -87.68 -0.71 -0.27 16 8 N -0.68 0.79 5.42 -54.99 -0.30 0.49 16 9 C 0.14 -0.21 4.44 -67.11 -0.30 -0.51 16 10 H 0.11 0.00 7.66 -51.93 -0.40 -0.40 16 11 C -0.15 0.25 7.25 -25.91 -0.19 0.06 16 12 C -0.08 0.20 3.86 -90.96 -0.35 -0.15 16 13 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 14 C -0.05 0.06 5.29 -104.62 -0.55 -0.50 16 15 C -0.11 0.09 8.60 -39.59 -0.34 -0.25 16 16 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 17 C -0.09 -0.10 6.22 -39.52 -0.25 -0.35 16 18 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 19 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 20 C -0.11 0.08 9.71 -39.59 -0.38 -0.30 16 21 C -0.14 0.40 7.29 -25.92 -0.19 0.21 16 22 S 0.10 0.05 20.57 -107.50 -2.21 -2.16 16 23 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 24 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 25 H -0.24 -0.60 7.11 56.52 0.40 -0.20 16 26 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 27 H 0.18 0.21 8.06 -52.48 -0.42 -0.21 16 28 H 0.41 -1.37 8.83 -40.82 -0.36 -1.73 16 29 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 30 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.13 -0.33 6.67 -52.49 -0.35 -0.68 16 32 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 33 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 34 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 35 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 LS Contribution 338.45 15.07 5.10 5.10 Total: 0.00 -6.20 338.45 -13.94 -20.14 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -4.01 Total: -9.29 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -4.35 Total: -3.32 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.45 Total: -1.39 kcal Atomic # 8 Polarization: -0.55 SS G_CDS: -0.45 Total: -1.01 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.28 Total: -5.70 kcal Atomic # 16 Polarization: 0.05 SS G_CDS: -2.21 Total: -2.16 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -6.20 -13.94 -20.14 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10390342_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.059 kcal (2) G-P(sol) polarization free energy of solvation -6.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.139 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.921 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds