Wall clock time and date at job start Mon Mar 8 2021 04:36:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.33324 * 125.95786 * 2 1 4 4 C 1.50710 * 122.70533 * 0.02562 * 3 2 1 5 5 O 1.42891 * 109.46903 * 329.99919 * 4 3 2 6 6 Si 1.86296 * 109.46803 * 210.00106 * 4 3 2 7 7 N 1.32116 * 114.58745 * 180.02562 * 3 2 1 8 8 C 1.29692 * 116.86182 * 359.97438 * 7 3 2 9 9 N 1.38614 * 124.94821 * 179.97438 * 8 7 3 10 10 C 1.46499 * 119.99895 * 180.02562 * 9 8 7 11 11 H 1.09004 * 112.91032 * 23.74899 * 10 9 8 12 12 C 1.53784 * 113.61434 * 154.99890 * 10 9 8 13 13 C 1.53787 * 87.07923 * 89.11404 * 12 10 9 14 14 H 1.09000 * 113.61529 * 270.88430 * 13 12 10 15 15 C 1.50702 * 113.60869 * 139.98154 * 13 12 10 16 16 C 1.38238 * 119.99160 * 299.71916 * 15 13 12 17 17 C 1.38217 * 120.00855 * 179.76814 * 16 15 13 18 18 C 1.38325 * 119.98981 * 0.51552 * 17 16 15 19 19 Br 1.89099 * 120.01023 * 179.76330 * 18 17 16 20 20 C 1.38323 * 119.97986 * 359.74139 * 18 17 16 21 21 C 1.38213 * 119.98952 * 0.02562 * 20 18 17 22 22 C 1.53779 * 113.61357 * 252.49491 * 10 9 8 23 23 S 1.70964 * 110.10112 * 0.24355 * 8 7 3 24 24 H 1.08997 * 109.47131 * 90.00124 * 1 2 3 25 25 H 1.09004 * 109.47233 * 210.00078 * 1 2 3 26 26 H 1.09004 * 109.47058 * 329.99677 * 1 2 3 27 27 H 1.08998 * 109.47014 * 90.00384 * 4 3 2 28 28 H 0.96695 * 113.99882 * 180.02562 * 5 4 3 29 29 H 1.48501 * 110.00395 * 298.67884 * 6 4 3 30 30 H 1.48501 * 110.00347 * 59.99915 * 6 4 3 31 31 H 0.97000 * 119.99831 * 0.02562 * 9 8 7 32 32 H 1.09004 * 113.61451 * 334.56890 * 12 10 9 33 33 H 1.08994 * 113.61477 * 203.66192 * 12 10 9 34 34 H 1.08003 * 119.99301 * 0.03200 * 16 15 13 35 35 H 1.08006 * 120.00724 * 180.27939 * 17 16 15 36 36 H 1.08003 * 120.00515 * 180.02562 * 20 18 17 37 37 H 1.08008 * 119.99616 * 180.02562 * 21 20 18 38 38 H 1.09006 * 113.61307 * 156.33848 * 22 10 9 39 39 H 1.09007 * 113.61642 * 25.43606 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.4812 2.5023 -0.6726 6 14 2.9321 3.6150 -0.8778 7 7 3.5850 0.8187 -0.0005 8 6 3.9314 -0.4311 -0.0005 9 7 5.2384 -0.8928 -0.0015 10 6 5.5064 -2.3331 -0.0019 11 1 4.6803 -2.9183 -0.4057 12 6 6.8742 -2.7050 -0.5984 13 6 7.4481 -2.5445 0.8193 14 1 7.7795 -1.5307 1.0440 15 6 8.4730 -3.5896 1.1774 16 6 8.1240 -4.9272 1.1803 17 6 9.0650 -5.8865 1.5041 18 6 10.3533 -5.5071 1.8355 19 35 11.6394 -6.8185 2.2850 20 6 10.7006 -4.1682 1.8376 21 6 9.7603 -3.2100 1.5091 22 6 6.0368 -2.8613 1.3415 23 16 2.5412 -1.4261 -0.0065 24 1 -0.3633 0.0000 -1.0276 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3633 0.8900 0.5139 27 1 1.6097 2.8212 1.0284 28 1 0.0690 3.3762 -0.7107 29 1 4.2370 3.6284 -0.1692 30 1 3.1204 3.1647 -2.2803 31 1 5.9755 -0.2623 -0.0019 32 1 7.2547 -1.9712 -1.3091 33 1 6.9227 -3.7262 -0.9761 34 1 7.1171 -5.2230 0.9255 35 1 8.7935 -6.9318 1.5020 36 1 11.7065 -3.8715 2.0959 37 1 10.0315 -2.1645 1.5103 38 1 5.8564 -3.9254 1.4941 39 1 5.7412 -2.2538 2.1969 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10390342_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:24 Heat of formation + Delta-G solvation = 74.731714 kcal Electronic energy + Delta-G solvation = -23122.078617 eV Core-core repulsion = 19591.038900 eV Total energy + Delta-G solvation = -3531.039717 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.014 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.63236 -40.88024 -39.54220 -37.68248 -35.57570 -33.38260 -32.41299 -32.14774 -30.44546 -29.14991 -27.02253 -26.17268 -25.48401 -24.36751 -23.92333 -22.71994 -20.79395 -20.19740 -19.10097 -18.39203 -17.94757 -17.28628 -16.92066 -16.46854 -16.29613 -16.21867 -15.70284 -15.56720 -15.11428 -14.88564 -14.67648 -14.47009 -14.10495 -14.05730 -13.86735 -13.73311 -13.58626 -13.34743 -13.05150 -12.84808 -12.59877 -12.29894 -12.06814 -12.04555 -11.78305 -11.54964 -11.44788 -11.26691 -11.09918 -10.61811 -10.29127 -10.13190 -9.98168 -9.60781 -8.62252 -4.82261 -0.05328 0.04575 0.16636 0.20170 0.62531 0.79039 1.38720 1.72095 1.89033 1.94810 2.36193 2.43507 3.09201 3.12816 3.33494 3.41488 3.59968 3.70087 3.80195 3.93325 3.96279 4.12147 4.18697 4.23509 4.28085 4.39688 4.43496 4.43963 4.51637 4.58416 4.68013 4.75548 4.84227 4.86793 4.89327 4.94627 5.10471 5.12133 5.16703 5.37751 5.41999 5.59238 5.68868 6.20642 6.62214 6.90077 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.225 4.225 3 C 0.098 3.902 4 C -0.036 4.036 5 O -0.544 6.544 6 Si 0.712 3.288 7 N -0.548 5.548 8 C 0.320 3.680 9 N -0.678 5.678 10 C 0.125 3.875 11 H 0.099 0.901 12 C -0.132 4.132 13 C -0.075 4.075 14 H 0.101 0.899 15 C -0.056 4.056 16 C -0.112 4.112 17 C -0.087 4.087 18 C -0.094 4.094 19 Br -0.049 7.049 20 C -0.087 4.087 21 C -0.109 4.109 22 C -0.148 4.148 23 S 0.105 5.895 24 H 0.073 0.927 25 H 0.057 0.943 26 H 0.088 0.912 27 H 0.081 0.919 28 H 0.385 0.615 29 H -0.252 1.252 30 H -0.264 1.264 31 H 0.412 0.588 32 H 0.082 0.918 33 H 0.104 0.896 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.101 0.899 39 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.259 1.528 0.283 2.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.348 4.348 3 C -0.030 4.030 4 C -0.148 4.148 5 O -0.350 6.350 6 Si 0.612 3.388 7 N -0.275 5.275 8 C -0.051 4.051 9 N -0.318 5.318 10 C 0.019 3.981 11 H 0.117 0.883 12 C -0.170 4.170 13 C -0.093 4.093 14 H 0.120 0.880 15 C -0.056 4.056 16 C -0.131 4.131 17 C -0.107 4.107 18 C -0.173 4.173 19 Br 0.036 6.964 20 C -0.107 4.107 21 C -0.128 4.128 22 C -0.187 4.187 23 S 0.353 5.647 24 H 0.091 0.909 25 H 0.076 0.924 26 H 0.107 0.893 27 H 0.098 0.902 28 H 0.233 0.767 29 H -0.177 1.177 30 H -0.189 1.189 31 H 0.251 0.749 32 H 0.100 0.900 33 H 0.122 0.878 34 H 0.150 0.850 35 H 0.152 0.848 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.119 0.881 39 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.614 -0.410 -0.043 0.740 hybrid contribution -0.056 0.699 0.248 0.743 sum -0.670 0.288 0.204 0.757 Atomic orbital electron populations 1.20110 0.86143 1.02518 1.02862 1.25198 1.01600 0.92426 1.15550 1.18929 0.86370 0.95124 1.02593 1.23955 0.93110 0.96235 1.01482 1.86463 1.33749 1.35705 1.79123 0.96161 0.78902 0.84633 0.79101 1.65696 1.17289 1.16878 1.27665 1.23183 0.91777 0.91289 0.98893 1.43558 1.01788 1.06157 1.80285 1.21972 0.98564 0.79850 0.97743 0.88350 1.23436 0.93698 1.03644 0.96232 1.21618 0.93004 0.98053 0.96619 0.88031 1.19795 0.94279 0.94069 0.97505 1.21021 0.99622 0.92037 1.00372 1.21144 0.91340 1.00476 0.97722 1.21871 0.94643 0.93699 1.07133 1.96787 1.54498 1.52782 1.92318 1.21159 1.00327 0.90947 0.98274 1.21098 0.92583 0.99700 0.99450 1.23695 0.94516 1.02665 0.97805 1.83929 0.96317 1.10426 1.73985 0.90871 0.92441 0.89317 0.90162 0.76660 1.17737 1.18894 0.74930 0.89961 0.87754 0.84961 0.84824 0.84865 0.85107 0.88100 0.90110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.08 8.96 36.00 0.32 0.25 16 2 C -0.23 -0.76 6.50 -36.03 -0.23 -0.99 16 3 C 0.10 0.42 5.95 -84.18 -0.50 -0.08 16 4 C -0.04 -0.05 2.82 36.01 0.10 0.06 16 5 O -0.54 0.13 9.86 -35.23 -0.35 -0.22 16 6 Si 0.71 0.80 32.08 -169.99 -5.45 -4.66 16 7 N -0.55 -2.78 8.95 -11.36 -0.10 -2.89 16 8 C 0.32 0.97 8.24 -87.67 -0.72 0.24 16 9 N -0.68 -0.17 5.42 -54.99 -0.30 -0.47 16 10 C 0.13 -0.24 4.31 -67.12 -0.29 -0.53 16 11 H 0.10 -0.20 7.06 -51.93 -0.37 -0.57 16 12 C -0.13 0.38 7.29 -25.91 -0.19 0.19 16 13 C -0.07 0.19 3.86 -90.96 -0.35 -0.16 16 14 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 15 C -0.06 0.07 5.29 -104.62 -0.55 -0.48 16 16 C -0.11 0.14 8.62 -39.59 -0.34 -0.20 16 17 C -0.09 0.01 9.79 -39.56 -0.39 -0.38 16 18 C -0.09 -0.08 6.22 -39.52 -0.25 -0.33 16 19 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.36 16 20 C -0.09 -0.02 9.79 -39.56 -0.39 -0.40 16 21 C -0.11 0.08 9.71 -39.59 -0.38 -0.31 16 22 C -0.15 0.36 7.25 -25.92 -0.19 0.18 16 23 S 0.10 0.20 21.69 -107.50 -2.33 -2.13 16 24 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 25 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.09 0.08 6.61 -51.93 -0.34 -0.27 16 27 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 28 H 0.39 -2.06 8.74 45.56 0.40 -1.66 16 29 H -0.25 -1.16 7.11 56.52 0.40 -0.76 16 30 H -0.26 -1.40 7.11 56.52 0.40 -1.00 16 31 H 0.41 -0.12 8.83 -40.82 -0.36 -0.48 16 32 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 33 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 34 H 0.13 -0.43 6.64 -52.48 -0.35 -0.78 16 35 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 36 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 37 H 0.13 -0.30 8.06 -52.48 -0.42 -0.72 16 38 H 0.10 -0.34 6.30 -51.93 -0.33 -0.67 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 LS Contribution 355.21 15.07 5.35 5.35 Total: 0.00 -7.57 355.21 -14.56 -22.13 By element: Atomic # 1 Polarization: -7.07 SS G_CDS: -4.74 Total: -11.81 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -4.35 Total: -2.95 kcal Atomic # 7 Polarization: -2.96 SS G_CDS: -0.40 Total: -3.36 kcal Atomic # 8 Polarization: 0.13 SS G_CDS: -0.35 Total: -0.22 kcal Atomic # 14 Polarization: 0.80 SS G_CDS: -5.45 Total: -4.66 kcal Atomic # 16 Polarization: 0.20 SS G_CDS: -2.33 Total: -2.13 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -7.57 -14.56 -22.13 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10390342_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.861 kcal (2) G-P(sol) polarization free energy of solvation -7.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.129 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds