Wall clock time and date at job start Mon Mar 8 2021 05:29:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52992 * 109.47280 * 2 1 4 4 H 1.09005 * 109.47587 * 304.99952 * 3 2 1 5 5 C 1.53000 * 109.47016 * 64.99900 * 3 2 1 6 6 C 1.53005 * 109.46886 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.47305 * 299.99584 * 6 5 3 8 8 H 1.08997 * 109.47419 * 300.00858 * 7 6 5 9 9 N 1.46495 * 109.47146 * 180.02562 * 7 6 5 10 10 C 1.39140 * 120.00119 * 85.00650 * 9 7 6 11 11 N 1.32341 * 119.71829 * 0.26510 * 10 9 7 12 12 C 1.32007 * 121.64629 * 180.27154 * 11 10 9 13 13 C 1.37982 * 120.90207 * 359.72225 * 12 11 10 14 14 C 1.50697 * 120.32645 * 179.97438 * 13 12 11 15 15 O 1.42906 * 109.47139 * 245.02265 * 14 13 12 16 16 Si 1.86299 * 109.47189 * 5.02018 * 14 13 12 17 17 C 1.38904 * 119.34805 * 0.02562 * 13 12 11 18 18 C 1.38439 * 118.48364 * 0.02562 * 17 13 12 19 19 F 1.35104 * 120.47218 * 179.97438 * 18 17 13 20 20 C 1.53007 * 109.46614 * 60.00179 * 7 6 5 21 21 C 1.52992 * 109.47269 * 299.99983 * 20 7 6 22 22 H 1.08990 * 109.47033 * 300.00070 * 1 2 3 23 23 H 1.09003 * 109.47107 * 60.00111 * 1 2 3 24 24 H 1.08997 * 109.46954 * 179.97438 * 1 2 3 25 25 H 1.09007 * 109.47169 * 239.99972 * 2 1 3 26 26 H 1.09002 * 109.46964 * 120.00422 * 2 1 3 27 27 H 1.08999 * 109.47062 * 299.99810 * 5 3 2 28 28 H 1.08998 * 109.47108 * 60.00265 * 5 3 2 29 29 H 1.09005 * 109.46758 * 180.02562 * 6 5 3 30 30 H 1.08998 * 109.47080 * 60.00187 * 6 5 3 31 31 H 0.97006 * 120.00385 * 265.00498 * 9 7 6 32 32 H 1.08007 * 119.54768 * 179.74889 * 12 11 10 33 33 H 1.08993 * 109.47730 * 125.02427 * 14 13 12 34 34 H 0.96700 * 113.99930 * 179.97438 * 15 14 13 35 35 H 1.48507 * 110.00303 * 178.68237 * 16 14 13 36 36 H 1.48499 * 110.00232 * 300.00415 * 16 14 13 37 37 H 1.07997 * 120.75505 * 179.97438 * 17 13 12 38 38 H 1.09005 * 109.46843 * 60.00472 * 20 7 6 39 39 H 1.09004 * 109.46705 * 179.97438 * 20 7 6 40 40 H 1.08999 * 109.47271 * 179.97438 * 21 20 7 41 41 H 1.08997 * 109.47468 * 299.99752 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6352 2.1264 1.3073 6 6 2.1447 3.5692 1.3070 7 6 3.6696 3.5715 1.1811 8 1 4.1045 3.0327 2.0229 9 7 4.1574 4.9529 1.1815 10 6 4.3894 5.6085 2.3866 11 7 4.1724 4.9772 3.5293 12 6 4.3747 5.5642 4.6942 13 6 4.8286 6.8655 4.7626 14 6 5.0546 7.5232 6.0995 15 8 4.1397 8.6098 6.2565 16 14 4.7796 6.2787 7.4583 17 6 5.0741 7.5636 3.5871 18 6 4.8521 6.9229 2.3801 19 9 5.0772 7.5642 1.2125 20 6 4.0743 2.8874 -0.1263 21 6 3.5648 1.4448 -0.1260 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 1.8934 -0.5139 -0.8900 26 1 1.8933 -0.5139 0.8900 27 1 0.5489 2.1252 1.3969 28 1 2.0698 1.5874 2.1491 29 1 1.8567 4.0563 2.2387 30 1 1.7098 4.1079 0.4653 31 1 4.3188 5.4105 0.3415 32 1 4.1828 5.0184 5.6062 33 1 6.0765 7.8984 6.1518 34 1 4.2281 9.0801 7.0968 35 1 5.0303 6.9066 8.7806 36 1 3.3896 5.7596 7.3979 37 1 5.4293 8.5831 3.6142 38 1 3.6394 3.4263 -0.9681 39 1 5.1606 2.8895 -0.2162 40 1 3.8528 0.9576 -1.0575 41 1 3.9998 0.9060 0.7157 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10466080_17656566.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:29:54 Heat of formation + Delta-G solvation = -55.016876 kcal Electronic energy + Delta-G solvation = -22345.734054 eV Core-core repulsion = 18947.646740 eV Total energy + Delta-G solvation = -3398.087314 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.153 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -49.78796 -41.38289 -40.06262 -38.07600 -36.70818 -34.09490 -33.11007 -31.78190 -31.41131 -29.04310 -26.38910 -25.24208 -24.06245 -23.51923 -22.60699 -21.59877 -20.84898 -19.13424 -18.64065 -18.26866 -17.94152 -16.82217 -16.74765 -16.21584 -15.88067 -15.69757 -15.53809 -15.12560 -14.97511 -14.71358 -14.41215 -14.27355 -14.15750 -14.02186 -13.91123 -13.55647 -13.19009 -12.86580 -12.59867 -12.50967 -12.34947 -12.10520 -12.01698 -11.68544 -11.49289 -11.42138 -11.10217 -10.88327 -10.65217 -10.54872 -10.43334 -8.67362 -5.01391 0.02128 0.21102 1.21848 1.54495 1.90699 2.03191 2.59722 3.13561 3.24523 3.39726 3.65916 3.68762 3.69267 3.84173 3.92149 4.06500 4.12746 4.18386 4.27495 4.34632 4.41306 4.46902 4.50163 4.54407 4.59732 4.69763 4.74009 4.76445 4.86422 4.99892 5.04199 5.06464 5.10104 5.14479 5.16843 5.26284 5.26833 5.32311 5.46805 5.49536 5.57630 6.05587 6.26695 6.39736 7.04674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.120 4.120 3 C -0.090 4.090 4 H 0.070 0.930 5 C -0.112 4.112 6 C -0.129 4.129 7 C 0.157 3.843 8 H 0.093 0.907 9 N -0.714 5.714 10 C 0.393 3.607 11 N -0.510 5.510 12 C 0.150 3.850 13 C -0.164 4.164 14 C -0.063 4.063 15 O -0.537 6.537 16 Si 0.680 3.320 17 C -0.037 4.037 18 C -0.022 4.022 19 F -0.134 7.134 20 C -0.128 4.128 21 C -0.109 4.109 22 H 0.057 0.943 23 H 0.053 0.947 24 H 0.053 0.947 25 H 0.061 0.939 26 H 0.062 0.938 27 H 0.066 0.934 28 H 0.065 0.935 29 H 0.067 0.933 30 H 0.060 0.940 31 H 0.410 0.590 32 H 0.163 0.837 33 H 0.078 0.922 34 H 0.381 0.619 35 H -0.258 1.258 36 H -0.251 1.251 37 H 0.147 0.853 38 H 0.066 0.934 39 H 0.069 0.931 40 H 0.067 0.933 41 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.085 -2.026 0.868 3.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.109 4.109 4 H 0.088 0.912 5 C -0.150 4.150 6 C -0.168 4.168 7 C 0.053 3.947 8 H 0.111 0.889 9 N -0.346 5.346 10 C 0.154 3.846 11 N -0.227 5.227 12 C -0.007 4.007 13 C -0.169 4.169 14 C -0.173 4.173 15 O -0.345 6.345 16 Si 0.581 3.419 17 C -0.063 4.063 18 C -0.049 4.049 19 F -0.113 7.113 20 C -0.166 4.166 21 C -0.147 4.147 22 H 0.076 0.924 23 H 0.072 0.928 24 H 0.072 0.928 25 H 0.080 0.920 26 H 0.081 0.919 27 H 0.085 0.915 28 H 0.084 0.916 29 H 0.086 0.914 30 H 0.079 0.921 31 H 0.247 0.753 32 H 0.179 0.821 33 H 0.096 0.904 34 H 0.229 0.771 35 H -0.183 1.183 36 H -0.176 1.176 37 H 0.165 0.835 38 H 0.085 0.915 39 H 0.087 0.913 40 H 0.086 0.914 41 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.085 -3.467 0.913 3.746 hybrid contribution 0.075 2.502 -0.247 2.515 sum 1.161 -0.965 0.666 1.650 Atomic orbital electron populations 1.21828 0.95851 1.01663 1.01928 1.21564 0.95992 0.96141 1.02060 1.21245 0.95251 0.96106 0.98266 0.91188 1.21591 1.00963 0.94898 0.97502 1.21946 0.95219 0.97251 1.02355 1.21003 0.93990 0.80728 0.98979 0.88915 1.44721 1.71096 1.14679 1.04062 1.18439 0.91258 0.86929 0.87978 1.67340 1.22158 1.36678 0.96510 1.22327 0.92028 0.91451 0.94911 1.19796 1.07495 0.95572 0.94073 1.24563 0.95311 0.95963 1.01444 1.86601 1.59821 1.45789 1.42259 0.95143 0.85859 0.84433 0.76494 1.21244 0.95126 1.00301 0.89651 1.17978 1.12373 0.91806 0.82724 1.91486 1.93132 1.81281 1.45425 1.21821 1.01310 0.96611 0.96877 1.21521 0.95342 0.95427 1.02453 0.92448 0.92832 0.92803 0.92008 0.91892 0.91491 0.91582 0.91404 0.92143 0.75269 0.82054 0.90443 0.77130 1.18278 1.17574 0.83520 0.91494 0.91256 0.91407 0.91480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.10 9.67 37.16 0.36 0.46 16 2 C -0.12 0.11 5.40 -26.74 -0.14 -0.04 16 3 C -0.09 0.09 2.19 -90.62 -0.20 -0.11 16 4 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 5 C -0.11 0.05 4.96 -26.73 -0.13 -0.08 16 6 C -0.13 -0.05 5.51 -26.73 -0.15 -0.20 16 7 C 0.16 0.01 2.47 -67.93 -0.17 -0.15 16 8 H 0.09 0.11 7.53 -51.93 -0.39 -0.28 16 9 N -0.71 -0.61 5.22 -53.85 -0.28 -0.89 16 10 C 0.39 0.98 7.47 -154.86 -1.16 -0.18 16 11 N -0.51 -1.31 9.20 -12.36 -0.11 -1.43 16 12 C 0.15 0.19 9.84 -17.57 -0.17 0.02 16 13 C -0.16 -0.19 5.39 -104.47 -0.56 -0.75 16 14 C -0.06 0.04 2.81 36.00 0.10 0.14 16 15 O -0.54 -0.38 12.82 -35.23 -0.45 -0.84 16 16 Si 0.68 -1.07 29.87 -169.99 -5.08 -6.15 16 17 C -0.04 -0.07 9.82 -39.26 -0.39 -0.45 16 18 C -0.02 -0.06 7.35 -39.09 -0.29 -0.35 16 19 F -0.13 -0.40 16.65 2.25 0.04 -0.36 16 20 C -0.13 0.15 5.39 -26.73 -0.14 0.01 16 21 C -0.11 0.14 5.20 -26.73 -0.14 0.01 16 22 H 0.06 -0.03 6.56 -51.93 -0.34 -0.37 16 23 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.06 -0.06 8.14 -51.92 -0.42 -0.48 16 26 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 -0.02 6.56 -51.93 -0.34 -0.36 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 30 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.41 -0.07 8.08 -40.82 -0.33 -0.40 16 32 H 0.16 -0.14 4.87 -52.48 -0.26 -0.40 16 33 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 34 H 0.38 -1.25 8.74 45.56 0.40 -0.85 16 35 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 36 H -0.25 -0.35 7.05 56.52 0.40 0.05 16 37 H 0.15 0.08 8.06 -52.49 -0.42 -0.34 16 38 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 327.47 15.07 4.93 4.93 Total: 0.00 -4.63 327.47 -10.50 -15.13 By element: Atomic # 1 Polarization: -2.34 SS G_CDS: -6.37 Total: -8.71 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -3.18 Total: -1.68 kcal Atomic # 7 Polarization: -1.93 SS G_CDS: -0.40 Total: -2.32 kcal Atomic # 8 Polarization: -0.38 SS G_CDS: -0.45 Total: -0.84 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.08 Total: -6.15 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -4.63 -10.50 -15.13 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10466080_17656566.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.889 kcal (2) G-P(sol) polarization free energy of solvation -4.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds