Wall clock time and date at job start Mon Mar 8 2021 05:37:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86308 * 109.46665 * 2 1 4 4 C 1.50703 * 109.47219 * 240.00410 * 2 1 3 5 5 C 1.38017 * 120.33777 * 119.97071 * 4 2 1 6 6 N 1.31971 * 120.85544 * 179.74612 * 5 4 2 7 7 C 1.32399 * 121.62353 * 0.56621 * 6 5 4 8 8 N 1.39003 * 119.70300 * 179.71248 * 7 6 5 9 9 C 1.46496 * 119.99437 * 179.73131 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74661 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99902 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08997 * 113.61223 * 270.84552 * 12 11 9 14 14 C 1.50698 * 113.61342 * 140.02323 * 12 11 9 15 15 C 1.38245 * 119.97629 * 299.72562 * 14 12 11 16 16 C 1.38197 * 120.02565 * 179.72561 * 15 14 12 17 17 C 1.38460 * 119.97261 * 0.57335 * 16 15 14 18 18 F 1.35108 * 120.02585 * 179.68490 * 17 16 15 19 19 C 1.38455 * 119.94865 * 359.70011 * 17 16 15 20 20 C 1.38201 * 119.97779 * 0.02562 * 19 17 16 21 21 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 22 22 C 1.39136 * 120.58568 * 359.44065 * 7 6 5 23 23 C 1.38293 * 119.09525 * 0.26853 * 22 7 6 24 24 H 0.96699 * 114.00782 * 60.00210 * 1 2 3 25 25 H 1.08998 * 109.47585 * 119.99777 * 2 1 3 26 26 H 1.48500 * 109.99725 * 298.68287 * 3 2 1 27 27 H 1.48489 * 109.99815 * 60.00322 * 3 2 1 28 28 H 1.08004 * 119.57365 * 0.02562 * 5 4 2 29 29 H 0.97001 * 120.00446 * 359.72412 * 8 7 6 30 30 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 31 31 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 32 32 H 1.08002 * 119.98289 * 359.97438 * 15 14 12 33 33 H 1.08001 * 120.01321 * 180.25359 * 16 15 14 34 34 H 1.08004 * 120.00992 * 180.02562 * 19 17 16 35 35 H 1.08000 * 119.99044 * 179.97438 * 20 19 17 36 36 H 1.08997 * 113.61668 * 89.11298 * 21 12 11 37 37 H 1.08994 * 113.61387 * 220.02033 * 21 12 11 38 38 H 1.08000 * 120.44606 * 180.29713 * 22 7 6 39 39 H 1.08008 * 120.74276 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7247 -0.0461 -2.1438 6 7 3.1744 -0.6596 -3.2223 7 6 2.8763 -1.9243 -3.4766 8 7 3.3668 -2.5294 -4.6279 9 6 3.0459 -3.9301 -4.9126 10 1 2.1321 -4.2645 -4.4213 11 6 3.1063 -4.2844 -6.4078 12 6 4.5924 -4.6154 -6.1914 13 1 5.2547 -3.7608 -6.3298 14 6 5.0532 -5.8401 -6.9389 15 6 4.4665 -7.0658 -6.6849 16 6 4.8843 -8.1885 -7.3739 17 6 5.8992 -8.0876 -8.3104 18 9 6.3129 -9.1857 -8.9800 19 6 6.4899 -6.8605 -8.5599 20 6 6.0665 -5.7380 -7.8737 21 6 4.2366 -4.8870 -4.7201 22 6 2.0812 -2.6545 -2.5989 23 6 1.6001 -2.0399 -1.4573 24 1 -0.3934 0.4416 -0.7650 25 1 1.7924 -0.5138 0.8900 26 1 1.5876 2.4586 -1.2242 27 1 1.5614 2.4679 1.2085 28 1 2.9847 0.9879 -1.9714 29 1 3.9214 -2.0242 -5.2428 30 1 2.9403 -3.4313 -7.0657 31 1 2.5008 -5.1501 -6.6763 32 1 3.6785 -7.1452 -5.9506 33 1 4.4230 -9.1453 -7.1782 34 1 7.2813 -6.7805 -9.2905 35 1 6.5275 -4.7808 -8.0679 36 1 3.9398 -5.9176 -4.5258 37 1 4.9830 -4.5204 -4.0156 38 1 1.8435 -3.6875 -2.8061 39 1 0.9810 -2.5818 -0.7576 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10466352_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:37:43 Heat of formation + Delta-G solvation = 23.247099 kcal Electronic energy + Delta-G solvation = -22822.511677 eV Core-core repulsion = 19225.988819 eV Total energy + Delta-G solvation = -3596.522858 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.122 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -49.81169 -41.75126 -40.99195 -39.20498 -37.94646 -35.38774 -33.41026 -32.21248 -31.90284 -30.72927 -26.92203 -26.79157 -25.74919 -24.74801 -24.14459 -22.99817 -22.33234 -20.29220 -19.09989 -18.64697 -18.52252 -17.52029 -17.37077 -16.99051 -16.52283 -16.47155 -16.31329 -16.12687 -15.76748 -15.39573 -15.22049 -14.91865 -14.59207 -14.30237 -14.25950 -14.04090 -13.93367 -13.76879 -13.63398 -13.28345 -13.07722 -12.50001 -12.27065 -12.01440 -11.93799 -11.91643 -11.42033 -11.14123 -10.75470 -10.53243 -10.37591 -10.15304 -9.53688 -8.74731 -4.95666 0.07685 0.18532 0.22826 0.40947 1.30253 1.59960 1.95059 1.98113 2.47999 2.81944 3.24841 3.27518 3.38221 3.47007 3.50659 3.57311 3.68385 3.76063 3.78008 3.87383 3.92922 4.03202 4.05646 4.18081 4.27851 4.32751 4.38637 4.52428 4.56721 4.63404 4.72297 4.77616 4.84213 4.88858 4.94160 5.00253 5.02790 5.11175 5.20152 5.30545 5.47485 5.51965 5.85104 5.97357 6.41353 6.48436 7.13536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.678 3.322 4 C -0.233 4.233 5 C 0.156 3.844 6 N -0.540 5.540 7 C 0.410 3.590 8 N -0.704 5.704 9 C 0.128 3.872 10 H 0.100 0.900 11 C -0.136 4.136 12 C -0.071 4.071 13 H 0.100 0.900 14 C -0.082 4.082 15 C -0.088 4.088 16 C -0.151 4.151 17 C 0.094 3.906 18 F -0.140 7.140 19 C -0.151 4.151 20 C -0.086 4.086 21 C -0.150 4.150 22 C -0.238 4.238 23 C -0.006 4.006 24 H 0.375 0.625 25 H 0.117 0.883 26 H -0.258 1.258 27 H -0.256 1.256 28 H 0.155 0.845 29 H 0.407 0.593 30 H 0.079 0.921 31 H 0.100 0.900 32 H 0.133 0.867 33 H 0.136 0.864 34 H 0.136 0.864 35 H 0.132 0.868 36 H 0.096 0.904 37 H 0.078 0.922 38 H 0.135 0.865 39 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.605 -0.309 0.083 0.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.579 3.421 4 C -0.238 4.238 5 C -0.001 4.001 6 N -0.256 5.256 7 C 0.175 3.825 8 N -0.336 5.336 9 C 0.021 3.979 10 H 0.118 0.882 11 C -0.175 4.175 12 C -0.089 4.089 13 H 0.118 0.882 14 C -0.083 4.083 15 C -0.106 4.106 16 C -0.169 4.169 17 C 0.075 3.925 18 F -0.118 7.118 19 C -0.170 4.170 20 C -0.104 4.104 21 C -0.189 4.189 22 C -0.263 4.263 23 C -0.032 4.032 24 H 0.223 0.777 25 H 0.135 0.865 26 H -0.183 1.183 27 H -0.181 1.181 28 H 0.172 0.828 29 H 0.243 0.757 30 H 0.097 0.903 31 H 0.118 0.882 32 H 0.151 0.849 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.150 0.850 36 H 0.114 0.886 37 H 0.097 0.903 38 H 0.152 0.848 39 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.964 0.437 -0.003 1.058 hybrid contribution -1.168 -0.747 -0.446 1.456 sum -0.204 -0.310 -0.449 0.582 Atomic orbital electron populations 1.86589 1.17967 1.79920 1.49340 1.24755 0.83678 1.10542 0.98003 0.95171 0.91710 0.74724 0.80501 1.20939 1.06016 0.96537 1.00345 1.22212 0.91400 0.98651 0.87830 1.67143 1.27237 1.09107 1.22144 1.18364 0.89039 0.88441 0.86691 1.44148 1.55947 1.10914 1.22596 1.21904 0.98360 0.80696 0.96891 0.88198 1.23452 0.95719 1.02663 0.95621 1.21547 0.96640 0.95623 0.95118 0.88182 1.19752 0.96546 0.94689 0.97274 1.20869 0.99589 0.91250 0.98922 1.21183 0.97875 1.00531 0.97350 1.17781 0.96831 0.83281 0.94595 1.91525 1.89373 1.52113 1.78814 1.21203 1.01936 0.91521 1.02303 1.20952 0.96118 0.98262 0.95092 1.23713 0.98759 1.00371 0.96013 1.21501 1.05360 1.01972 0.97418 1.21201 0.93817 0.93197 0.94937 0.77718 0.86547 1.18314 1.18063 0.82790 0.75703 0.90253 0.88200 0.84894 0.84607 0.84623 0.84987 0.88580 0.90341 0.84754 0.84620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.52 12.78 -35.23 -0.45 -0.97 16 2 C -0.06 0.03 2.84 36.01 0.10 0.13 16 3 Si 0.68 -0.70 29.82 -169.99 -5.07 -5.77 16 4 C -0.23 -0.05 5.40 -104.46 -0.56 -0.62 16 5 C 0.16 0.13 9.84 -17.57 -0.17 -0.04 16 6 N -0.54 -1.21 10.39 -12.44 -0.13 -1.34 16 7 C 0.41 0.40 7.65 -155.02 -1.19 -0.78 16 8 N -0.70 0.81 5.44 -53.05 -0.29 0.52 16 9 C 0.13 -0.38 4.12 -67.02 -0.28 -0.66 16 10 H 0.10 -0.35 6.10 -51.93 -0.32 -0.66 16 11 C -0.14 0.46 7.29 -25.92 -0.19 0.27 16 12 C -0.07 0.21 3.86 -90.96 -0.35 -0.14 16 13 H 0.10 -0.31 8.09 -51.93 -0.42 -0.73 16 14 C -0.08 0.12 5.29 -104.62 -0.55 -0.43 16 15 C -0.09 0.13 8.62 -39.59 -0.34 -0.21 16 16 C -0.15 0.01 10.03 -39.51 -0.40 -0.38 16 17 C 0.09 0.13 7.30 -39.42 -0.29 -0.15 16 18 F -0.14 -0.42 17.27 2.25 0.04 -0.38 16 19 C -0.15 -0.03 10.03 -39.52 -0.40 -0.43 16 20 C -0.09 0.08 9.71 -39.59 -0.38 -0.30 16 21 C -0.15 0.46 7.26 -25.82 -0.19 0.27 16 22 C -0.24 -0.01 9.29 -39.23 -0.36 -0.37 16 23 C -0.01 0.00 9.76 -39.32 -0.38 -0.38 16 24 H 0.38 -0.62 8.70 45.56 0.40 -0.22 16 25 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 27 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 28 H 0.16 -0.16 4.88 -52.48 -0.26 -0.42 16 29 H 0.41 -0.60 8.83 -40.82 -0.36 -0.96 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.10 -0.38 7.73 -51.93 -0.40 -0.78 16 32 H 0.13 -0.47 6.64 -52.49 -0.35 -0.82 16 33 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 34 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 35 H 0.13 -0.35 8.05 -52.49 -0.42 -0.78 16 36 H 0.10 -0.37 6.30 -51.93 -0.33 -0.70 16 37 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.13 -0.25 6.03 -52.49 -0.32 -0.56 16 39 H 0.14 -0.12 8.06 -52.48 -0.42 -0.54 16 LS Contribution 327.97 15.07 4.94 4.94 Total: 0.00 -6.01 327.97 -11.39 -17.40 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -4.50 Total: -10.16 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.93 Total: -4.24 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.42 Total: -0.82 kcal Atomic # 8 Polarization: -0.52 SS G_CDS: -0.45 Total: -0.97 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.07 Total: -5.77 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -6.01 -11.39 -17.40 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10466352_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.647 kcal (2) G-P(sol) polarization free energy of solvation -6.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.633 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds