Wall clock time and date at job start Mon Mar 8 2021 05:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.47394 * 2 1 4 4 C 1.50705 * 109.47107 * 240.00366 * 2 1 3 5 5 C 1.33329 * 125.94890 * 299.99955 * 4 2 1 6 6 N 1.32123 * 114.57474 * 180.02562 * 5 4 2 7 7 C 1.29686 * 116.86765 * 0.02562 * 6 5 4 8 8 N 1.38614 * 124.94783 * 179.97438 * 7 6 5 9 9 C 1.46505 * 119.99797 * 0.02562 * 8 7 6 10 10 H 1.08996 * 112.85192 * 336.19871 * 9 8 7 11 11 C 1.53956 * 113.53444 * 107.50519 * 9 8 7 12 12 C 1.53781 * 87.02038 * 89.18420 * 11 9 8 13 13 H 1.09000 * 113.61796 * 270.77073 * 12 11 9 14 14 C 1.50708 * 113.61354 * 139.94866 * 12 11 9 15 15 C 1.38242 * 119.97079 * 140.86763 * 14 12 11 16 16 C 1.38205 * 120.02001 * 179.97438 * 15 14 12 17 17 C 1.38455 * 119.97502 * 0.02562 * 16 15 14 18 18 F 1.35106 * 120.02241 * 179.97438 * 17 16 15 19 19 C 1.38458 * 119.95220 * 359.97438 * 17 16 15 20 20 C 1.38198 * 119.97324 * 0.02562 * 19 17 16 21 21 C 1.53778 * 87.17182 * 25.36209 * 12 11 9 22 22 S 1.70957 * 110.10249 * 0.24332 * 7 6 5 23 23 H 0.96703 * 113.99994 * 299.99794 * 1 2 3 24 24 H 1.08999 * 109.47572 * 120.00553 * 2 1 3 25 25 H 1.48493 * 110.00407 * 178.67780 * 3 2 1 26 26 H 1.48493 * 110.00112 * 300.00458 * 3 2 1 27 27 H 1.07997 * 122.71253 * 359.97438 * 5 4 2 28 28 H 0.96993 * 119.99922 * 180.02562 * 8 7 6 29 29 H 1.09000 * 113.67039 * 334.65951 * 11 9 8 30 30 H 1.08998 * 113.61267 * 203.70460 * 11 9 8 31 31 H 1.07994 * 119.98958 * 0.25380 * 15 14 12 32 32 H 1.08001 * 120.00504 * 180.02562 * 16 15 14 33 33 H 1.07996 * 120.01541 * 179.97438 * 19 17 16 34 34 H 1.08000 * 119.98611 * 180.02562 * 20 19 17 35 35 H 1.09001 * 113.61753 * 89.15416 * 21 12 11 36 36 H 1.09006 * 113.61847 * 220.05950 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6834 -1.9788 -1.5581 6 7 2.2384 -2.3723 -2.6907 7 6 2.9438 -1.4944 -3.3338 8 7 3.5981 -1.7261 -4.5337 9 6 3.5199 -3.0444 -5.1679 10 1 3.2989 -3.8426 -4.4594 11 6 2.6334 -3.0696 -6.4263 12 6 3.8953 -2.7024 -7.2249 13 1 4.0572 -1.6284 -7.3162 14 6 4.0074 -3.4253 -8.5425 15 6 4.4829 -2.7599 -9.6570 16 6 4.5867 -3.4219 -10.8657 17 6 4.2138 -4.7520 -10.9602 18 9 4.3144 -5.4000 -12.1414 19 6 3.7377 -5.4174 -9.8432 20 6 3.6348 -4.7534 -8.6356 21 6 4.7082 -3.3539 -6.0938 22 16 2.9554 -0.0120 -2.4824 23 1 -0.3933 0.4417 0.7651 24 1 1.7924 -0.5139 0.8899 25 1 3.5346 1.7703 0.0322 26 1 1.5615 2.4679 -1.2084 27 1 1.0785 -2.6320 -0.9467 28 1 4.1076 -1.0154 -4.9533 29 1 1.8681 -2.2935 -6.4381 30 1 2.2391 -4.0578 -6.6629 31 1 4.7776 -1.7236 -9.5821 32 1 4.9586 -2.9019 -11.7362 33 1 3.4462 -6.4547 -9.9158 34 1 3.2639 -5.2724 -7.7641 35 1 4.8821 -4.4201 -6.2392 36 1 5.6156 -2.8071 -5.8372 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10466352_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:37:45 Heat of formation + Delta-G solvation = 32.151308 kcal Electronic energy + Delta-G solvation = -21407.211569 eV Core-core repulsion = 17900.227073 eV Total energy + Delta-G solvation = -3506.984496 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.078 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.79896 -41.49869 -40.51282 -39.11689 -37.78044 -35.31724 -32.19753 -31.82968 -30.97634 -26.95626 -26.76342 -26.05043 -24.52555 -24.03542 -22.78449 -21.23175 -20.18802 -19.28358 -18.74233 -18.48466 -17.75598 -17.33488 -16.84586 -16.63566 -16.50854 -15.99118 -15.77959 -15.42890 -15.40448 -15.11163 -14.58104 -14.52093 -14.32365 -14.22372 -13.98711 -13.72285 -13.61372 -13.10470 -12.82374 -12.43824 -12.30734 -12.08425 -11.99601 -11.88912 -11.39740 -11.10944 -10.62792 -10.33982 -10.15027 -10.13691 -9.52150 -8.76520 -5.22787 -0.06319 0.06313 0.09739 0.20121 0.64204 1.21681 1.56487 1.91494 2.00966 2.05231 2.49613 3.27159 3.29639 3.42647 3.49543 3.54860 3.65189 3.71894 3.81910 3.89195 3.96292 4.05384 4.20507 4.34126 4.40298 4.49136 4.58397 4.64978 4.74884 4.79327 4.87107 4.91142 4.94450 5.00247 5.12352 5.19718 5.23291 5.49814 5.82811 5.86718 6.00161 6.57619 6.97972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.017 4.017 3 Si 0.668 3.332 4 C -0.261 4.261 5 C 0.124 3.876 6 N -0.545 5.545 7 C 0.332 3.668 8 N -0.675 5.675 9 C 0.136 3.864 10 H 0.109 0.891 11 C -0.145 4.145 12 C -0.073 4.073 13 H 0.098 0.902 14 C -0.082 4.082 15 C -0.087 4.087 16 C -0.151 4.151 17 C 0.094 3.906 18 F -0.140 7.140 19 C -0.150 4.150 20 C -0.088 4.088 21 C -0.137 4.137 22 S 0.070 5.930 23 H 0.383 0.617 24 H 0.082 0.918 25 H -0.242 1.242 26 H -0.239 1.239 27 H 0.179 0.821 28 H 0.414 0.586 29 H 0.075 0.925 30 H 0.097 0.903 31 H 0.132 0.868 32 H 0.136 0.864 33 H 0.136 0.864 34 H 0.134 0.866 35 H 0.101 0.899 36 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.798 2.584 3.903 4.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.131 4.131 3 Si 0.567 3.433 4 C -0.383 4.383 5 C -0.027 4.027 6 N -0.270 5.270 7 C -0.039 4.039 8 N -0.314 5.314 9 C 0.028 3.972 10 H 0.127 0.873 11 C -0.184 4.184 12 C -0.092 4.092 13 H 0.116 0.884 14 C -0.082 4.082 15 C -0.105 4.105 16 C -0.170 4.170 17 C 0.075 3.925 18 F -0.118 7.118 19 C -0.169 4.169 20 C -0.105 4.105 21 C -0.175 4.175 22 S 0.318 5.682 23 H 0.231 0.769 24 H 0.100 0.900 25 H -0.166 1.166 26 H -0.163 1.163 27 H 0.196 0.804 28 H 0.252 0.748 29 H 0.094 0.906 30 H 0.115 0.885 31 H 0.149 0.851 32 H 0.154 0.846 33 H 0.154 0.846 34 H 0.152 0.848 35 H 0.120 0.880 36 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.777 3.121 2.417 4.330 hybrid contribution -0.266 -0.896 -0.225 0.961 sum 1.511 2.226 2.193 3.471 Atomic orbital electron populations 1.86513 1.17138 1.81753 1.49766 1.23677 0.85477 1.09245 0.94660 0.95135 0.81773 0.78199 0.88157 1.24290 1.12771 0.97773 1.03467 1.21347 0.96739 0.93001 0.91616 1.66460 1.17085 1.33095 1.10351 1.23765 0.94940 0.93184 0.91969 1.43710 1.54343 1.14108 1.19241 1.21946 0.96491 0.84829 0.93939 0.87320 1.23653 0.96547 1.03257 0.94943 1.21601 0.97620 0.99412 0.90545 0.88389 1.19747 0.99407 0.94115 0.94961 1.20937 0.98129 1.00073 0.91361 1.21193 1.02882 0.93260 0.99656 1.17777 1.01806 0.91286 0.81619 1.91523 1.93943 1.81413 1.44943 1.21187 1.02288 1.01265 0.92143 1.20884 0.98555 0.93947 0.97158 1.23483 0.97291 1.02523 0.94213 1.84099 1.51495 1.14807 1.17774 0.76877 0.90029 1.16616 1.16272 0.80415 0.74849 0.90579 0.88483 0.85059 0.84637 0.84571 0.84831 0.88036 0.90366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.04 12.84 -35.23 -0.45 -0.49 16 2 C -0.02 0.00 2.98 36.01 0.11 0.11 16 3 Si 0.67 -0.57 31.05 -169.99 -5.28 -5.85 16 4 C -0.26 -0.69 5.78 -36.02 -0.21 -0.89 16 5 C 0.12 0.39 11.22 -19.14 -0.21 0.17 16 6 N -0.54 -2.12 9.83 -15.21 -0.15 -2.27 16 7 C 0.33 0.79 8.09 -87.68 -0.71 0.08 16 8 N -0.68 0.21 5.42 -54.90 -0.30 -0.09 16 9 C 0.14 -0.14 4.45 -67.02 -0.30 -0.43 16 10 H 0.11 0.05 7.66 -51.93 -0.40 -0.35 16 11 C -0.14 0.20 7.27 -25.83 -0.19 0.01 16 12 C -0.07 0.16 3.85 -90.96 -0.35 -0.19 16 13 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 14 C -0.08 0.06 5.29 -104.61 -0.55 -0.49 16 15 C -0.09 0.04 9.71 -39.59 -0.38 -0.34 16 16 C -0.15 -0.10 10.03 -39.51 -0.40 -0.49 16 17 C 0.09 0.18 7.30 -39.42 -0.29 -0.11 16 18 F -0.14 -0.47 17.27 2.25 0.04 -0.44 16 19 C -0.15 -0.08 10.03 -39.51 -0.40 -0.48 16 20 C -0.09 0.05 8.53 -39.59 -0.34 -0.28 16 21 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 22 S 0.07 0.16 20.57 -107.50 -2.21 -2.05 16 23 H 0.38 -1.96 8.74 45.56 0.40 -1.56 16 24 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 25 H -0.24 -0.34 7.11 56.52 0.40 0.06 16 26 H -0.24 -0.57 7.11 56.52 0.40 -0.17 16 27 H 0.18 0.26 8.06 -52.49 -0.42 -0.17 16 28 H 0.41 -0.97 8.82 -40.82 -0.36 -1.33 16 29 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 30 H 0.10 -0.17 6.39 -51.93 -0.33 -0.51 16 31 H 0.13 -0.31 8.05 -52.49 -0.42 -0.74 16 32 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 33 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 34 H 0.13 -0.32 6.72 -52.49 -0.35 -0.68 16 35 H 0.10 -0.28 7.64 -51.93 -0.40 -0.67 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 323.54 15.07 4.88 4.88 Total: 0.00 -7.11 323.54 -11.89 -19.00 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -4.01 Total: -9.49 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -4.41 Total: -3.20 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.45 Total: -2.36 kcal Atomic # 8 Polarization: -0.04 SS G_CDS: -0.45 Total: -0.49 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.28 Total: -5.85 kcal Atomic # 16 Polarization: 0.16 SS G_CDS: -2.21 Total: -2.05 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -7.11 -11.89 -19.00 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10466352_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.148 kcal (2) G-P(sol) polarization free energy of solvation -7.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.997 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds