Wall clock time and date at job start Mon Mar 8 2021 06:16:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47499 * 2 1 4 4 C 1.50699 * 109.47209 * 120.00458 * 2 1 3 5 5 C 1.38600 * 120.72303 * 64.99328 * 4 2 1 6 6 N 1.32275 * 119.19870 * 179.97438 * 5 4 2 7 7 C 1.32491 * 120.74312 * 0.02562 * 6 5 4 8 8 N 1.38407 * 119.22243 * 179.97438 * 7 6 5 9 9 C 1.46496 * 120.00059 * 180.02562 * 8 7 6 10 10 H 1.08994 * 112.91109 * 23.75195 * 9 8 7 11 11 C 1.53787 * 113.61210 * 155.00459 * 9 8 7 12 12 C 1.53778 * 87.08035 * 89.11438 * 11 9 8 13 13 H 1.09004 * 113.61682 * 270.87724 * 12 11 9 14 14 C 1.50699 * 113.61086 * 140.06661 * 12 11 9 15 15 C 1.38332 * 120.00921 * 119.72681 * 14 12 11 16 16 Cl 1.73603 * 120.01194 * 359.97085 * 15 14 12 17 17 C 1.38370 * 119.97792 * 179.70115 * 15 14 12 18 18 C 1.38199 * 119.98334 * 0.58974 * 17 15 14 19 19 C 1.38265 * 120.01302 * 359.70220 * 18 17 15 20 20 C 1.38222 * 120.02690 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.08449 * 25.43264 * 12 11 9 22 22 N 1.32498 * 121.56473 * 0.27838 * 7 6 5 23 23 C 1.32287 * 120.73682 * 359.44158 * 22 7 6 24 24 H 0.96698 * 113.99629 * 299.99881 * 1 2 3 25 25 H 1.09004 * 109.47290 * 239.99841 * 2 1 3 26 26 H 1.48491 * 110.00185 * 178.68059 * 3 2 1 27 27 H 1.48498 * 109.99957 * 300.00400 * 3 2 1 28 28 H 1.08001 * 120.40451 * 0.02562 * 5 4 2 29 29 H 0.97002 * 119.99451 * 0.02562 * 8 7 6 30 30 H 1.08998 * 113.61103 * 203.66698 * 11 9 8 31 31 H 1.08999 * 113.61167 * 334.56160 * 11 9 8 32 32 H 1.07998 * 120.01207 * 180.27697 * 17 15 14 33 33 H 1.08000 * 119.99466 * 179.68308 * 18 17 15 34 34 H 1.07995 * 119.98431 * 179.97438 * 19 18 17 35 35 H 1.07989 * 119.99585 * 180.02562 * 20 19 18 36 36 H 1.08993 * 113.61229 * 220.02023 * 21 12 11 37 37 H 1.09000 * 113.61263 * 89.11673 * 21 12 11 38 38 H 1.07997 * 120.40098 * 180.25731 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1478 -2.6568 2.5049 7 6 2.8242 -1.9727 3.4159 8 7 3.2856 -2.6252 4.5460 9 6 4.0349 -1.8853 5.5644 10 1 3.8240 -0.8160 5.5530 11 6 3.9557 -2.5140 6.9656 12 6 5.1935 -3.3404 6.5789 13 1 4.9527 -4.2889 6.0985 14 6 6.1940 -3.4879 7.6961 15 6 6.5225 -4.7456 8.1692 16 17 5.7817 -6.1546 7.4765 17 6 7.4458 -4.8806 9.1909 18 6 8.0302 -3.7582 9.7464 19 6 7.6970 -2.5009 9.2773 20 6 6.7797 -2.3659 8.2522 21 6 5.5365 -2.2168 5.5866 22 7 3.0644 -0.6775 3.2737 23 6 2.6417 -0.0250 2.2033 24 1 -0.3932 0.4417 0.7651 25 1 1.7924 -0.5139 -0.8900 26 1 3.5346 1.7702 0.0321 27 1 1.5616 2.4679 -1.2084 28 1 1.1421 -2.6265 0.6748 29 1 3.1128 -3.5724 4.6635 30 1 4.1387 -1.8052 7.7731 31 1 3.0608 -3.1159 7.1241 32 1 7.7060 -5.8625 9.5576 33 1 8.7471 -3.8631 10.5473 34 1 8.1536 -1.6241 9.7120 35 1 6.5201 -1.3837 7.8859 36 1 5.9178 -2.5789 4.6319 37 1 6.1518 -1.4268 6.0172 38 1 2.8441 1.0299 2.0910 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10565094_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:16:13 Heat of formation + Delta-G solvation = 78.409103 kcal Electronic energy + Delta-G solvation = -23047.818529 eV Core-core repulsion = 19497.915947 eV Total energy + Delta-G solvation = -3549.902582 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.15245 -41.27844 -39.42384 -38.01561 -37.40544 -35.56215 -34.68310 -32.62229 -31.74552 -31.34672 -27.01779 -26.82303 -26.14689 -25.54874 -23.82699 -23.24273 -22.59583 -20.34197 -19.59411 -18.59240 -18.20408 -18.01853 -16.92720 -16.61170 -16.55180 -16.20989 -16.01916 -15.78068 -15.63199 -15.14528 -14.88208 -14.84847 -14.57499 -14.48138 -14.07746 -13.72875 -13.49932 -13.18227 -13.03448 -12.71959 -12.52040 -12.24099 -12.21087 -12.02516 -11.83462 -11.76483 -11.53867 -11.35183 -11.18228 -10.57378 -10.01024 -9.91123 -9.63557 -9.11146 -5.11772 0.06319 0.12650 0.16636 0.21663 1.17071 1.22021 1.56136 1.75630 1.92322 2.55491 2.81749 3.11540 3.36055 3.40460 3.51592 3.58490 3.63316 3.71093 3.75928 3.77611 3.87420 3.97752 4.08103 4.19140 4.29162 4.31110 4.49378 4.56906 4.61079 4.64543 4.70126 4.75420 4.87651 4.89212 4.94920 5.03803 5.21636 5.29244 5.39088 5.43495 5.76045 5.80260 6.01476 6.40276 6.51295 7.29535 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.295 4.295 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.571 3.429 8 N -0.677 5.677 9 C 0.137 3.863 10 H 0.112 0.888 11 C -0.135 4.135 12 C -0.082 4.082 13 H 0.105 0.895 14 C -0.061 4.061 15 C -0.034 4.034 16 Cl -0.068 7.068 17 C -0.109 4.109 18 C -0.112 4.112 19 C -0.112 4.112 20 C -0.106 4.106 21 C -0.143 4.143 22 N -0.560 5.560 23 C 0.200 3.800 24 H 0.379 0.621 25 H 0.115 0.885 26 H -0.255 1.255 27 H -0.251 1.251 28 H 0.170 0.830 29 H 0.415 0.585 30 H 0.101 0.899 31 H 0.078 0.922 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.074 0.926 37 H 0.097 0.903 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.560 3.450 3.040 4.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.582 3.418 4 C -0.303 4.303 5 C 0.055 3.945 6 N -0.290 5.290 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.031 3.969 10 H 0.130 0.870 11 C -0.173 4.173 12 C -0.100 4.100 13 H 0.123 0.877 14 C -0.062 4.062 15 C -0.060 4.060 16 Cl -0.039 7.039 17 C -0.127 4.127 18 C -0.130 4.130 19 C -0.130 4.130 20 C -0.124 4.124 21 C -0.182 4.182 22 N -0.282 5.282 23 C 0.032 3.968 24 H 0.226 0.774 25 H 0.133 0.867 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.187 0.813 29 H 0.253 0.747 30 H 0.119 0.881 31 H 0.097 0.903 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.151 0.849 36 H 0.093 0.907 37 H 0.115 0.885 38 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.501 3.220 2.987 4.642 hybrid contribution -0.190 -0.867 -0.877 1.248 sum 1.311 2.353 2.109 3.422 Atomic orbital electron populations 1.86513 1.17135 1.81646 1.49262 1.24702 0.85107 1.09624 0.96412 0.95020 0.81089 0.77764 0.87955 1.21712 1.09054 0.97859 1.01658 1.22838 0.89120 0.90969 0.91523 1.67981 1.16595 1.40000 1.04473 1.19338 0.86898 0.85492 0.86842 1.43828 1.57934 1.11869 1.17643 1.21822 0.91034 0.97515 0.86531 0.86962 1.23448 0.97838 0.99380 0.96612 1.21744 0.94304 0.99654 0.94322 0.87724 1.19564 0.97957 0.91280 0.97397 1.20878 0.99008 0.87854 0.98296 1.98376 1.81727 1.39864 1.83890 1.21108 0.95978 1.00101 0.95532 1.21174 0.99825 0.91978 1.00005 1.21292 0.97350 0.97831 0.96512 1.21008 0.96816 0.98118 0.96485 1.23609 0.96955 0.98090 0.99585 1.67906 1.26928 1.08254 1.25144 1.22769 0.88133 0.99193 0.86659 0.77368 0.86733 1.17980 1.17536 0.81283 0.74688 0.88073 0.90287 0.84886 0.85008 0.85214 0.84896 0.90723 0.88483 0.81666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.42 12.85 -35.23 -0.45 -0.04 16 2 C -0.05 0.06 2.83 36.01 0.10 0.16 16 3 Si 0.68 -1.38 29.89 -169.99 -5.08 -6.46 16 4 C -0.29 0.06 5.36 -104.35 -0.56 -0.50 16 5 C 0.22 0.24 10.99 -17.23 -0.19 0.05 16 6 N -0.57 -1.59 10.46 -13.93 -0.15 -1.74 16 7 C 0.57 1.36 8.43 -322.80 -2.72 -1.36 16 8 N -0.68 -0.32 5.41 -55.00 -0.30 -0.62 16 9 C 0.14 -0.13 4.33 -67.12 -0.29 -0.42 16 10 H 0.11 -0.05 7.37 -51.93 -0.38 -0.44 16 11 C -0.13 0.24 7.29 -25.92 -0.19 0.05 16 12 C -0.08 0.07 3.63 -90.96 -0.33 -0.26 16 13 H 0.10 -0.01 6.58 -51.93 -0.34 -0.35 16 14 C -0.06 -0.01 5.29 -104.59 -0.55 -0.56 16 15 C -0.03 -0.04 6.31 -39.50 -0.25 -0.29 16 16 Cl -0.07 -0.09 27.16 -51.86 -1.41 -1.50 16 17 C -0.11 -0.04 9.83 -39.55 -0.39 -0.43 16 18 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 19 C -0.11 0.11 10.05 -39.58 -0.40 -0.28 16 20 C -0.11 0.10 8.61 -39.59 -0.34 -0.25 16 21 C -0.14 0.15 7.26 -25.92 -0.19 -0.04 16 22 N -0.56 -1.06 9.13 -13.93 -0.13 -1.18 16 23 C 0.20 0.00 9.92 -17.22 -0.17 -0.17 16 24 H 0.38 -1.67 8.70 45.56 0.40 -1.28 16 25 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 26 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 27 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 28 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 29 H 0.42 -0.08 8.82 -40.82 -0.36 -0.44 16 30 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 31 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 33 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 34 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 35 H 0.13 -0.37 6.66 -52.49 -0.35 -0.72 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 37 H 0.10 -0.20 6.32 -51.93 -0.33 -0.53 16 38 H 0.17 -0.45 5.07 -52.49 -0.27 -0.72 16 LS Contribution 333.00 15.07 5.02 5.02 Total: 0.00 -6.45 333.00 -13.54 -19.99 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -4.18 Total: -8.84 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -6.86 Total: -4.63 kcal Atomic # 7 Polarization: -2.97 SS G_CDS: -0.57 Total: -3.54 kcal Atomic # 8 Polarization: 0.42 SS G_CDS: -0.45 Total: -0.04 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.08 Total: -6.46 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.41 Total: -1.50 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -6.45 -13.54 -19.99 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10565094_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.395 kcal (2) G-P(sol) polarization free energy of solvation -6.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.538 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.986 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.409 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds