Wall clock time and date at job start Mon Mar 8 2021 06:16:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47499 * 2 1 4 4 C 1.50699 * 109.47209 * 120.00458 * 2 1 3 5 5 C 1.38600 * 120.72303 * 64.99328 * 4 2 1 6 6 N 1.32275 * 119.19870 * 179.97438 * 5 4 2 7 7 C 1.32491 * 120.74312 * 0.02562 * 6 5 4 8 8 N 1.38407 * 119.22243 * 179.97438 * 7 6 5 9 9 C 1.46496 * 120.00059 * 180.02562 * 8 7 6 10 10 H 1.08994 * 112.91109 * 23.75195 * 9 8 7 11 11 C 1.53787 * 113.61210 * 155.00459 * 9 8 7 12 12 C 1.53778 * 87.08035 * 89.11438 * 11 9 8 13 13 H 1.09004 * 113.61682 * 270.87724 * 12 11 9 14 14 C 1.50699 * 113.61086 * 140.06661 * 12 11 9 15 15 C 1.38332 * 120.00921 * 119.72681 * 14 12 11 16 16 Cl 1.73603 * 120.01194 * 359.97085 * 15 14 12 17 17 C 1.38370 * 119.97792 * 179.70115 * 15 14 12 18 18 C 1.38199 * 119.98334 * 0.58974 * 17 15 14 19 19 C 1.38265 * 120.01302 * 359.70220 * 18 17 15 20 20 C 1.38222 * 120.02690 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.08449 * 25.43264 * 12 11 9 22 22 N 1.32498 * 121.56473 * 0.27838 * 7 6 5 23 23 C 1.32287 * 120.73682 * 359.44158 * 22 7 6 24 24 H 0.96698 * 113.99629 * 299.99881 * 1 2 3 25 25 H 1.09004 * 109.47290 * 239.99841 * 2 1 3 26 26 H 1.48491 * 110.00185 * 178.68059 * 3 2 1 27 27 H 1.48498 * 109.99957 * 300.00400 * 3 2 1 28 28 H 1.08001 * 120.40451 * 0.02562 * 5 4 2 29 29 H 0.97002 * 119.99451 * 0.02562 * 8 7 6 30 30 H 1.08998 * 113.61103 * 203.66698 * 11 9 8 31 31 H 1.08999 * 113.61167 * 334.56160 * 11 9 8 32 32 H 1.07998 * 120.01207 * 180.27697 * 17 15 14 33 33 H 1.08000 * 119.99466 * 179.68308 * 18 17 15 34 34 H 1.07995 * 119.98431 * 179.97438 * 19 18 17 35 35 H 1.07989 * 119.99585 * 180.02562 * 20 19 18 36 36 H 1.08993 * 113.61229 * 220.02023 * 21 12 11 37 37 H 1.09000 * 113.61263 * 89.11673 * 21 12 11 38 38 H 1.07997 * 120.40098 * 180.25731 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1478 -2.6568 2.5049 7 6 2.8242 -1.9727 3.4159 8 7 3.2856 -2.6252 4.5460 9 6 4.0349 -1.8853 5.5644 10 1 3.8240 -0.8160 5.5530 11 6 3.9557 -2.5140 6.9656 12 6 5.1935 -3.3404 6.5789 13 1 4.9527 -4.2889 6.0985 14 6 6.1940 -3.4879 7.6961 15 6 6.5225 -4.7456 8.1692 16 17 5.7817 -6.1546 7.4765 17 6 7.4458 -4.8806 9.1909 18 6 8.0302 -3.7582 9.7464 19 6 7.6970 -2.5009 9.2773 20 6 6.7797 -2.3659 8.2522 21 6 5.5365 -2.2168 5.5866 22 7 3.0644 -0.6775 3.2737 23 6 2.6417 -0.0250 2.2033 24 1 -0.3932 0.4417 0.7651 25 1 1.7924 -0.5139 -0.8900 26 1 3.5346 1.7702 0.0321 27 1 1.5616 2.4679 -1.2084 28 1 1.1421 -2.6265 0.6748 29 1 3.1128 -3.5724 4.6635 30 1 4.1387 -1.8052 7.7731 31 1 3.0608 -3.1159 7.1241 32 1 7.7060 -5.8625 9.5576 33 1 8.7471 -3.8631 10.5473 34 1 8.1536 -1.6241 9.7120 35 1 6.5201 -1.3837 7.8859 36 1 5.9178 -2.5789 4.6319 37 1 6.1518 -1.4268 6.0172 38 1 2.8441 1.0299 2.0910 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10565094_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:16:12 Heat of formation + Delta-G solvation = 84.761244 kcal Electronic energy + Delta-G solvation = -23047.543079 eV Core-core repulsion = 19497.915947 eV Total energy + Delta-G solvation = -3549.627132 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.17656 -41.21763 -39.36001 -37.94947 -37.43376 -35.54302 -34.74248 -32.58733 -31.67161 -31.30864 -26.98439 -26.72977 -26.11591 -25.53780 -23.76557 -23.23638 -22.53689 -20.28839 -19.59220 -18.56976 -18.14640 -17.97513 -16.87059 -16.60044 -16.48278 -16.17471 -15.99001 -15.77242 -15.57566 -15.08956 -14.83418 -14.77841 -14.56023 -14.44943 -14.08463 -13.66029 -13.40028 -13.15756 -12.93808 -12.67131 -12.52388 -12.25760 -12.15073 -11.97656 -11.90930 -11.77683 -11.52417 -11.28178 -11.14541 -10.52537 -10.04976 -9.84790 -9.59548 -9.12058 -4.98447 0.03663 0.12442 0.17744 0.28635 1.15815 1.33110 1.65930 1.76591 2.00562 2.62833 2.76967 3.13459 3.43783 3.53507 3.58932 3.64591 3.69083 3.72275 3.79892 3.86862 3.96444 4.10821 4.18480 4.23719 4.39353 4.40566 4.56205 4.63686 4.72092 4.73770 4.76188 4.82624 4.94636 4.98648 5.01869 5.11378 5.29957 5.33330 5.47893 5.50355 5.78874 5.86909 6.02298 6.37032 6.79628 7.24545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.049 4.049 3 Si 0.771 3.229 4 C -0.287 4.287 5 C 0.211 3.789 6 N -0.593 5.593 7 C 0.555 3.445 8 N -0.676 5.676 9 C 0.139 3.861 10 H 0.112 0.888 11 C -0.124 4.124 12 C -0.080 4.080 13 H 0.093 0.907 14 C -0.070 4.070 15 C -0.053 4.053 16 Cl -0.080 7.080 17 C -0.123 4.123 18 C -0.118 4.118 19 C -0.114 4.114 20 C -0.109 4.109 21 C -0.137 4.137 22 N -0.572 5.572 23 C 0.196 3.804 24 H 0.395 0.605 25 H 0.112 0.888 26 H -0.283 1.283 27 H -0.297 1.297 28 H 0.180 0.820 29 H 0.415 0.585 30 H 0.114 0.886 31 H 0.076 0.924 32 H 0.137 0.863 33 H 0.149 0.851 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.057 0.943 37 H 0.111 0.889 38 H 0.192 0.808 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.758 4.839 3.693 6.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.160 4.160 3 Si 0.677 3.323 4 C -0.296 4.296 5 C 0.044 3.956 6 N -0.315 5.315 7 C 0.199 3.801 8 N -0.312 5.312 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.162 4.162 12 C -0.099 4.099 13 H 0.111 0.889 14 C -0.071 4.071 15 C -0.080 4.080 16 Cl -0.052 7.052 17 C -0.141 4.141 18 C -0.136 4.136 19 C -0.132 4.132 20 C -0.127 4.127 21 C -0.176 4.176 22 N -0.294 5.294 23 C 0.029 3.971 24 H 0.245 0.755 25 H 0.130 0.870 26 H -0.210 1.210 27 H -0.224 1.224 28 H 0.197 0.803 29 H 0.253 0.747 30 H 0.132 0.868 31 H 0.094 0.906 32 H 0.155 0.845 33 H 0.167 0.833 34 H 0.169 0.831 35 H 0.171 0.829 36 H 0.076 0.924 37 H 0.129 0.871 38 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges 1.683 4.593 3.666 6.113 hybrid contribution -0.244 -1.278 -1.121 1.718 sum 1.439 3.315 2.545 4.420 Atomic orbital electron populations 1.86482 1.17220 1.82101 1.50447 1.24833 0.85130 1.10283 0.95771 0.93961 0.77846 0.74961 0.85545 1.21779 1.08552 0.97371 1.01855 1.23127 0.89256 0.91812 0.91432 1.67982 1.17516 1.40774 1.05266 1.19580 0.87311 0.85942 0.87297 1.43929 1.57788 1.11962 1.17508 1.21848 0.90903 0.97325 0.86603 0.87056 1.23413 0.97195 0.99184 0.96402 1.21677 0.94674 0.99331 0.94193 0.88874 1.19726 0.98300 0.91341 0.97684 1.21082 0.99875 0.87899 0.99130 1.98364 1.82006 1.40637 1.84146 1.21289 0.96231 1.00883 0.95721 1.21454 0.99933 0.91877 1.00318 1.21622 0.96977 0.98432 0.96191 1.21280 0.96491 0.98578 0.96333 1.23589 0.96975 0.98271 0.98747 1.67955 1.27442 1.08082 1.25950 1.23220 0.87506 1.00260 0.86112 0.75528 0.87040 1.21008 1.22447 0.80285 0.74674 0.86767 0.90563 0.84536 0.83299 0.83071 0.82931 0.92366 0.87090 0.79188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.17 12.85 -148.98 -1.91 -0.75 16 2 C -0.05 0.14 2.83 71.24 0.20 0.34 16 3 Si 0.77 -3.54 29.89 68.60 2.05 -1.49 16 4 C -0.29 0.16 5.36 -19.69 -0.11 0.06 16 5 C 0.21 0.56 10.99 84.71 0.93 1.49 16 6 N -0.59 -3.89 10.46 -197.99 -2.07 -5.96 16 7 C 0.56 3.05 8.43 261.49 2.20 5.26 16 8 N -0.68 -1.26 5.41 -327.93 -1.77 -3.03 16 9 C 0.14 -0.24 4.33 45.52 0.20 -0.04 16 10 H 0.11 -0.14 7.37 -2.39 -0.02 -0.16 16 11 C -0.12 0.45 7.29 31.12 0.23 0.68 16 12 C -0.08 0.09 3.63 -11.02 -0.04 0.05 16 13 H 0.09 0.11 6.58 -2.38 -0.02 0.09 16 14 C -0.07 -0.03 5.29 -19.84 -0.11 -0.13 16 15 C -0.05 -0.16 6.31 22.32 0.14 -0.02 16 16 Cl -0.08 -0.34 27.16 -2.72 -0.07 -0.41 16 17 C -0.12 -0.15 9.83 22.29 0.22 0.07 16 18 C -0.12 0.21 10.05 22.27 0.22 0.44 16 19 C -0.11 0.38 10.05 22.27 0.22 0.60 16 20 C -0.11 0.30 8.61 22.27 0.19 0.49 16 21 C -0.14 0.27 7.26 31.12 0.23 0.50 16 22 N -0.57 -2.19 9.13 -197.98 -1.81 -4.00 16 23 C 0.20 -0.09 9.92 84.71 0.84 0.75 16 24 H 0.39 -3.85 8.70 -74.06 -0.64 -4.49 16 25 H 0.11 -0.25 7.96 -2.38 -0.02 -0.27 16 26 H -0.28 -0.07 7.11 99.48 0.71 0.64 16 27 H -0.30 -0.96 7.11 99.48 0.71 -0.26 16 28 H 0.18 -0.12 8.06 -2.91 -0.02 -0.14 16 29 H 0.42 0.44 8.82 -92.71 -0.82 -0.38 16 30 H 0.11 -0.70 7.72 -2.39 -0.02 -0.72 16 31 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.14 -0.08 8.06 -2.91 -0.02 -0.11 16 33 H 0.15 -0.89 8.06 -2.91 -0.02 -0.92 16 34 H 0.15 -1.21 8.06 -2.91 -0.02 -1.23 16 35 H 0.15 -1.12 6.66 -2.92 -0.02 -1.14 16 36 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.11 -0.55 6.32 -2.39 -0.02 -0.57 16 38 H 0.19 -1.29 5.07 -2.91 -0.01 -1.30 16 Total: 0.00 -15.89 333.00 -0.32 -16.20 By element: Atomic # 1 Polarization: -10.79 SS G_CDS: -0.30 Total: -11.09 kcal Atomic # 6 Polarization: 4.96 SS G_CDS: 5.57 Total: 10.53 kcal Atomic # 7 Polarization: -7.34 SS G_CDS: -5.65 Total: -12.99 kcal Atomic # 8 Polarization: 1.17 SS G_CDS: -1.91 Total: -0.75 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.05 Total: -1.49 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.07 Total: -0.41 kcal Total: -15.89 -0.32 -16.20 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10565094_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.962 kcal (2) G-P(sol) polarization free energy of solvation -15.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.077 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.201 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds