Wall clock time and date at job start Mon Mar 8 2021 06:16:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47307 * 2 1 4 4 C 1.50701 * 109.47326 * 120.00277 * 2 1 3 5 5 C 1.33323 * 125.95359 * 64.99547 * 4 2 1 6 6 N 1.32121 * 114.58138 * 180.02562 * 5 4 2 7 7 C 1.29679 * 116.86473 * 359.97438 * 6 5 4 8 8 N 1.38614 * 124.94785 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99895 * 0.02803 * 8 7 6 10 10 H 1.09004 * 112.91032 * 23.74899 * 9 8 7 11 11 C 1.53784 * 113.61434 * 154.99890 * 9 8 7 12 12 C 1.53787 * 87.07923 * 89.11404 * 11 9 8 13 13 H 1.09000 * 113.61529 * 270.88430 * 12 11 9 14 14 C 1.50697 * 113.60917 * 140.06705 * 12 11 9 15 15 C 1.38332 * 120.00989 * 119.72786 * 14 12 11 16 16 Cl 1.73604 * 120.01006 * 359.97438 * 15 14 12 17 17 C 1.38367 * 119.97617 * 179.69546 * 15 14 12 18 18 C 1.38188 * 119.98826 * 0.59568 * 17 15 14 19 19 C 1.38264 * 120.01059 * 359.70397 * 18 17 15 20 20 C 1.38220 * 120.02798 * 359.97364 * 19 18 17 21 21 C 1.53779 * 113.61357 * 252.49491 * 9 8 7 22 22 S 1.70964 * 110.10189 * 0.24626 * 7 6 5 23 23 H 0.96709 * 113.99746 * 299.99821 * 1 2 3 24 24 H 1.09004 * 109.46725 * 240.00281 * 2 1 3 25 25 H 1.48497 * 109.99870 * 178.68250 * 3 2 1 26 26 H 1.48502 * 109.99922 * 300.00139 * 3 2 1 27 27 H 1.08003 * 122.70767 * 0.02704 * 5 4 2 28 28 H 0.97000 * 119.99831 * 180.02562 * 8 7 6 29 29 H 1.09004 * 113.61451 * 334.56890 * 11 9 8 30 30 H 1.08994 * 113.61477 * 203.66192 * 11 9 8 31 31 H 1.08004 * 120.00800 * 180.27572 * 17 15 14 32 32 H 1.08004 * 119.99802 * 179.72419 * 18 17 15 33 33 H 1.08001 * 119.98798 * 180.02562 * 19 18 17 34 34 H 1.08004 * 119.99486 * 180.02562 * 20 19 18 35 35 H 1.09006 * 113.61307 * 156.33848 * 21 9 8 36 36 H 1.08999 * 113.69146 * 25.44334 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.7622 -2.0026 1.5121 6 7 2.2974 -2.3903 2.6562 7 6 2.9109 -1.4847 3.3528 8 7 3.5298 -1.7058 4.5733 9 6 3.5208 -3.0450 5.1671 10 1 3.3869 -3.8357 4.4289 11 6 4.6889 -3.2975 6.1350 12 6 3.7847 -2.7402 7.2472 13 1 3.8635 -1.6604 7.3739 14 6 3.8955 -3.4918 8.5486 15 6 4.3109 -2.8357 9.6933 16 17 4.7054 -1.1462 9.6310 17 6 4.4064 -3.5250 10.8892 18 6 4.0986 -4.8714 10.9369 19 6 3.6894 -5.5282 9.7911 20 6 3.5874 -4.8385 8.5975 21 6 2.5885 -3.1733 6.3833 22 16 2.8388 0.0231 2.5502 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8901 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 1.2307 -2.6778 0.8579 28 1 3.9688 -0.9738 5.0341 29 1 5.5642 -2.6800 5.9335 30 1 4.9332 -4.3525 6.2587 31 1 4.7264 -3.0122 11.7843 32 1 4.1773 -5.4106 11.8693 33 1 3.4485 -6.5803 9.8288 34 1 3.2673 -5.3520 7.7029 35 1 2.2586 -4.1945 6.5748 36 1 1.7675 -2.4563 6.3834 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10565094_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:16:18 Heat of formation + Delta-G solvation = 68.415742 kcal Electronic energy + Delta-G solvation = -21470.597349 eV Core-core repulsion = 18074.839580 eV Total energy + Delta-G solvation = -3395.757769 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.049 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.53598 -40.56115 -39.34899 -37.81650 -37.43371 -35.33138 -32.12922 -31.76188 -30.99010 -26.97050 -26.80364 -26.15891 -24.57646 -23.75292 -22.82759 -21.27584 -20.13335 -19.51394 -18.42085 -18.01035 -17.08966 -16.94655 -16.51457 -16.39477 -16.16811 -15.77171 -15.57049 -15.16009 -14.95679 -14.84503 -14.83182 -14.51302 -13.98985 -13.70067 -13.51229 -13.10130 -12.83656 -12.75654 -12.54038 -12.32622 -12.24945 -12.00964 -12.00400 -11.57154 -11.36498 -11.08913 -10.77321 -10.22513 -10.14892 -9.92695 -9.65459 -8.75013 -5.13481 -0.02274 0.03081 0.10865 0.20103 0.70071 1.14136 1.26897 1.59643 1.91876 2.04196 2.08184 2.53921 3.29997 3.44670 3.48500 3.56828 3.67754 3.74632 3.85000 3.94428 3.96379 4.06408 4.27814 4.29318 4.48651 4.53960 4.59546 4.62808 4.68002 4.75892 4.83191 4.86900 4.92101 4.98825 5.19862 5.21349 5.37469 5.41443 5.74491 5.86041 6.03858 6.53525 7.01414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.657 3.343 4 C -0.307 4.307 5 C 0.120 3.880 6 N -0.549 5.549 7 C 0.329 3.671 8 N -0.675 5.675 9 C 0.138 3.862 10 H 0.109 0.891 11 C -0.135 4.135 12 C -0.082 4.082 13 H 0.104 0.896 14 C -0.062 4.062 15 C -0.034 4.034 16 Cl -0.068 7.068 17 C -0.108 4.108 18 C -0.111 4.111 19 C -0.111 4.111 20 C -0.106 4.106 21 C -0.143 4.143 22 S 0.088 5.912 23 H 0.380 0.620 24 H 0.122 0.878 25 H -0.242 1.242 26 H -0.236 1.236 27 H 0.176 0.824 28 H 0.415 0.585 29 H 0.078 0.922 30 H 0.100 0.900 31 H 0.133 0.867 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.096 0.904 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.403 -0.191 3.174 3.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.124 4.124 3 Si 0.557 3.443 4 C -0.430 4.430 5 C -0.031 4.031 6 N -0.274 5.274 7 C -0.041 4.041 8 N -0.314 5.314 9 C 0.030 3.970 10 H 0.127 0.873 11 C -0.173 4.173 12 C -0.100 4.100 13 H 0.123 0.877 14 C -0.062 4.062 15 C -0.060 4.060 16 Cl -0.039 7.039 17 C -0.127 4.127 18 C -0.129 4.129 19 C -0.130 4.130 20 C -0.124 4.124 21 C -0.182 4.182 22 S 0.337 5.663 23 H 0.227 0.773 24 H 0.139 0.861 25 H -0.166 1.166 26 H -0.159 1.159 27 H 0.193 0.807 28 H 0.252 0.748 29 H 0.097 0.903 30 H 0.119 0.881 31 H 0.151 0.849 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.151 0.849 35 H 0.115 0.885 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.359 0.561 2.658 3.037 hybrid contribution -0.114 -0.766 -0.226 0.806 sum 1.245 -0.205 2.432 2.740 Atomic orbital electron populations 1.86516 1.16939 1.81687 1.49112 1.24110 0.84810 1.08883 0.94635 0.94986 0.82011 0.77970 0.89353 1.25575 1.15163 0.98302 1.03915 1.21328 0.96572 0.93159 0.92088 1.66470 1.18627 1.33603 1.08685 1.23696 0.95369 0.93225 0.91851 1.43706 1.59007 1.11446 1.17218 1.21863 0.96221 0.84437 0.94495 0.87319 1.23457 0.97078 1.02851 0.93943 1.21742 0.97848 1.00117 0.90285 0.87746 1.19551 0.98910 0.94046 0.93721 1.20864 1.04183 0.85734 0.95229 1.98372 1.92423 1.14586 1.98548 1.21105 1.00214 0.94714 0.96677 1.21176 0.98914 0.93786 0.99073 1.21298 0.98613 1.00472 0.92569 1.21014 0.99836 0.92950 0.98619 1.23604 0.96853 1.02950 0.94765 1.83956 1.55877 1.11195 1.15294 0.77291 0.86094 1.16587 1.15932 0.80731 0.74772 0.90326 0.88112 0.84872 0.84991 0.85208 0.84916 0.88542 0.90516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.17 12.88 -35.23 -0.45 -0.63 16 2 C -0.01 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.66 -0.36 31.07 -169.99 -5.28 -5.64 16 4 C -0.31 -0.23 5.73 -36.02 -0.21 -0.44 16 5 C 0.12 0.23 11.24 -19.14 -0.22 0.01 16 6 N -0.55 -1.54 9.83 -15.21 -0.15 -1.69 16 7 C 0.33 0.38 8.09 -87.68 -0.71 -0.33 16 8 N -0.68 0.57 5.42 -54.99 -0.30 0.27 16 9 C 0.14 -0.16 4.44 -67.12 -0.30 -0.46 16 10 H 0.11 0.02 7.67 -51.93 -0.40 -0.38 16 11 C -0.13 0.28 7.29 -25.91 -0.19 0.09 16 12 C -0.08 0.12 3.63 -90.96 -0.33 -0.22 16 13 H 0.10 -0.12 6.58 -51.93 -0.34 -0.46 16 14 C -0.06 0.01 5.29 -104.59 -0.55 -0.54 16 15 C -0.03 -0.02 6.31 -39.50 -0.25 -0.27 16 16 Cl -0.07 -0.05 27.16 -51.86 -1.41 -1.46 16 17 C -0.11 -0.01 9.83 -39.55 -0.39 -0.40 16 18 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 19 C -0.11 0.12 10.05 -39.58 -0.40 -0.27 16 20 C -0.11 0.11 8.61 -39.59 -0.34 -0.23 16 21 C -0.14 0.20 7.26 -25.92 -0.19 0.01 16 22 S 0.09 0.00 20.59 -107.50 -2.21 -2.22 16 23 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 24 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 25 H -0.24 -0.42 7.11 56.52 0.40 -0.02 16 26 H -0.24 -0.48 7.11 56.52 0.40 -0.08 16 27 H 0.18 0.13 8.06 -52.48 -0.42 -0.29 16 28 H 0.41 -1.08 8.83 -40.82 -0.36 -1.44 16 29 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.10 -0.25 7.72 -51.93 -0.40 -0.65 16 31 H 0.13 -0.14 8.06 -52.48 -0.42 -0.57 16 32 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 33 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 34 H 0.13 -0.36 6.67 -52.48 -0.35 -0.71 16 35 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 330.92 15.07 4.99 4.99 Total: 0.00 -5.49 330.92 -13.10 -18.59 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -3.93 Total: -8.98 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -4.36 Total: -3.24 kcal Atomic # 7 Polarization: -0.97 SS G_CDS: -0.45 Total: -1.42 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.45 Total: -0.63 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.28 Total: -5.64 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.21 Total: -2.22 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.41 Total: -1.46 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -5.49 -13.10 -18.59 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10565094_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.007 kcal (2) G-P(sol) polarization free energy of solvation -5.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.592 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds