Wall clock time and date at job start Mon Mar 8 2021 06:16:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47307 * 2 1 4 4 C 1.50701 * 109.47326 * 120.00277 * 2 1 3 5 5 C 1.33323 * 125.95359 * 64.99547 * 4 2 1 6 6 N 1.32121 * 114.58138 * 180.02562 * 5 4 2 7 7 C 1.29679 * 116.86473 * 359.97438 * 6 5 4 8 8 N 1.38614 * 124.94785 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99895 * 0.02803 * 8 7 6 10 10 H 1.09004 * 112.91032 * 23.74899 * 9 8 7 11 11 C 1.53784 * 113.61434 * 154.99890 * 9 8 7 12 12 C 1.53787 * 87.07923 * 89.11404 * 11 9 8 13 13 H 1.09000 * 113.61529 * 270.88430 * 12 11 9 14 14 C 1.50697 * 113.60917 * 140.06705 * 12 11 9 15 15 C 1.38332 * 120.00989 * 119.72786 * 14 12 11 16 16 Cl 1.73604 * 120.01006 * 359.97438 * 15 14 12 17 17 C 1.38367 * 119.97617 * 179.69546 * 15 14 12 18 18 C 1.38188 * 119.98826 * 0.59568 * 17 15 14 19 19 C 1.38264 * 120.01059 * 359.70397 * 18 17 15 20 20 C 1.38220 * 120.02798 * 359.97364 * 19 18 17 21 21 C 1.53779 * 113.61357 * 252.49491 * 9 8 7 22 22 S 1.70964 * 110.10189 * 0.24626 * 7 6 5 23 23 H 0.96709 * 113.99746 * 299.99821 * 1 2 3 24 24 H 1.09004 * 109.46725 * 240.00281 * 2 1 3 25 25 H 1.48497 * 109.99870 * 178.68250 * 3 2 1 26 26 H 1.48502 * 109.99922 * 300.00139 * 3 2 1 27 27 H 1.08003 * 122.70767 * 0.02704 * 5 4 2 28 28 H 0.97000 * 119.99831 * 180.02562 * 8 7 6 29 29 H 1.09004 * 113.61451 * 334.56890 * 11 9 8 30 30 H 1.08994 * 113.61477 * 203.66192 * 11 9 8 31 31 H 1.08004 * 120.00800 * 180.27572 * 17 15 14 32 32 H 1.08004 * 119.99802 * 179.72419 * 18 17 15 33 33 H 1.08001 * 119.98798 * 180.02562 * 19 18 17 34 34 H 1.08004 * 119.99486 * 180.02562 * 20 19 18 35 35 H 1.09006 * 113.61307 * 156.33848 * 21 9 8 36 36 H 1.08999 * 113.69146 * 25.44334 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.7622 -2.0026 1.5121 6 7 2.2974 -2.3903 2.6562 7 6 2.9109 -1.4847 3.3528 8 7 3.5298 -1.7058 4.5733 9 6 3.5208 -3.0450 5.1671 10 1 3.3869 -3.8357 4.4289 11 6 4.6889 -3.2975 6.1350 12 6 3.7847 -2.7402 7.2472 13 1 3.8635 -1.6604 7.3739 14 6 3.8955 -3.4918 8.5486 15 6 4.3109 -2.8357 9.6933 16 17 4.7054 -1.1462 9.6310 17 6 4.4064 -3.5250 10.8892 18 6 4.0986 -4.8714 10.9369 19 6 3.6894 -5.5282 9.7911 20 6 3.5874 -4.8385 8.5975 21 6 2.5885 -3.1733 6.3833 22 16 2.8388 0.0231 2.5502 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8901 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 1.2307 -2.6778 0.8579 28 1 3.9688 -0.9738 5.0341 29 1 5.5642 -2.6800 5.9335 30 1 4.9332 -4.3525 6.2587 31 1 4.7264 -3.0122 11.7843 32 1 4.1773 -5.4106 11.8693 33 1 3.4485 -6.5803 9.8288 34 1 3.2673 -5.3520 7.7029 35 1 2.2586 -4.1945 6.5748 36 1 1.7675 -2.4563 6.3834 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10565094_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:16:18 Heat of formation + Delta-G solvation = 74.993732 kcal Electronic energy + Delta-G solvation = -21470.312106 eV Core-core repulsion = 18074.839580 eV Total energy + Delta-G solvation = -3395.472526 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.049 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.46310 -40.58729 -39.27817 -37.81955 -37.41905 -35.29978 -32.06732 -31.66966 -31.00307 -26.94579 -26.69725 -26.13036 -24.57972 -23.68042 -22.75727 -21.26109 -20.11803 -19.48124 -18.35373 -18.00350 -17.06792 -16.86642 -16.51484 -16.33062 -16.13471 -15.79327 -15.54893 -15.09801 -14.97394 -14.79629 -14.76511 -14.45397 -14.06065 -13.61901 -13.40118 -13.01484 -12.83366 -12.68721 -12.50798 -12.45129 -12.16432 -12.01467 -11.92985 -11.51858 -11.27316 -11.06481 -10.81195 -10.27205 -10.18317 -9.84549 -9.58873 -8.75437 -5.12504 -0.07094 0.00659 0.17981 0.28683 0.65984 1.16400 1.26271 1.57386 1.88235 1.96184 2.13119 2.62899 3.39717 3.50835 3.57667 3.66657 3.69976 3.86231 3.93151 3.96188 4.10991 4.18627 4.39323 4.40551 4.48169 4.60804 4.70640 4.72307 4.75664 4.78366 4.91785 4.98514 5.00888 5.06140 5.24136 5.29891 5.47838 5.50648 5.86191 5.87842 6.12618 6.72295 6.99189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.012 4.012 3 Si 0.730 3.270 4 C -0.308 4.308 5 C 0.104 3.896 6 N -0.575 5.575 7 C 0.318 3.682 8 N -0.669 5.669 9 C 0.138 3.862 10 H 0.096 0.904 11 C -0.125 4.125 12 C -0.077 4.077 13 H 0.101 0.899 14 C -0.070 4.070 15 C -0.051 4.051 16 Cl -0.076 7.076 17 C -0.122 4.122 18 C -0.118 4.118 19 C -0.116 4.116 20 C -0.111 4.111 21 C -0.137 4.137 22 S 0.114 5.886 23 H 0.395 0.605 24 H 0.120 0.880 25 H -0.270 1.270 26 H -0.272 1.272 27 H 0.179 0.821 28 H 0.423 0.577 29 H 0.081 0.919 30 H 0.108 0.892 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.149 0.851 34 H 0.149 0.851 35 H 0.104 0.896 36 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.428 -0.516 3.615 3.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.126 4.126 3 Si 0.634 3.366 4 C -0.431 4.431 5 C -0.047 4.047 6 N -0.301 5.301 7 C -0.052 4.052 8 N -0.308 5.308 9 C 0.030 3.970 10 H 0.115 0.885 11 C -0.163 4.163 12 C -0.096 4.096 13 H 0.119 0.881 14 C -0.070 4.070 15 C -0.078 4.078 16 Cl -0.047 7.047 17 C -0.141 4.141 18 C -0.136 4.136 19 C -0.134 4.134 20 C -0.129 4.129 21 C -0.176 4.176 22 S 0.364 5.636 23 H 0.245 0.755 24 H 0.137 0.863 25 H -0.196 1.196 26 H -0.197 1.197 27 H 0.196 0.804 28 H 0.262 0.738 29 H 0.099 0.901 30 H 0.126 0.874 31 H 0.156 0.844 32 H 0.166 0.834 33 H 0.167 0.833 34 H 0.166 0.834 35 H 0.122 0.878 36 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 1.378 0.238 3.133 3.431 hybrid contribution -0.125 -0.677 -0.362 0.778 sum 1.253 -0.440 2.771 3.073 Atomic orbital electron populations 1.86482 1.16974 1.82104 1.50248 1.24211 0.84883 1.09216 0.94308 0.94120 0.79120 0.75947 0.87436 1.25697 1.14945 0.98200 1.04304 1.21455 0.97172 0.93792 0.92263 1.66466 1.19637 1.34648 1.09346 1.23903 0.95343 0.93682 0.92308 1.43767 1.58485 1.11930 1.16664 1.21831 0.96938 0.83991 0.94214 0.88546 1.23414 0.96686 1.03296 0.92935 1.21685 0.97982 0.99856 0.90035 0.88107 1.19714 0.98977 0.94541 0.93809 1.21050 1.05218 0.85557 0.95925 1.98361 1.92557 1.15240 1.98587 1.21295 1.00622 0.95341 0.96796 1.21444 0.98534 0.93556 1.00045 1.21603 0.97961 1.01463 0.92354 1.21261 0.99481 0.92717 0.99425 1.23573 0.96430 1.03085 0.94520 1.83804 1.55315 1.10077 1.14446 0.75543 0.86287 1.19638 1.19710 0.80446 0.73810 0.90080 0.87393 0.84399 0.83351 0.83335 0.83362 0.87790 0.91597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.27 12.88 -148.98 -1.92 -2.18 16 2 C -0.01 0.00 2.99 71.24 0.21 0.21 16 3 Si 0.73 -0.76 31.07 68.60 2.13 1.37 16 4 C -0.31 -0.53 5.73 24.57 0.14 -0.39 16 5 C 0.10 0.46 11.24 83.54 0.94 1.40 16 6 N -0.57 -3.60 9.83 -202.03 -1.99 -5.58 16 7 C 0.32 0.83 8.09 179.32 1.45 2.28 16 8 N -0.67 1.01 5.42 -327.90 -1.78 -0.77 16 9 C 0.14 -0.30 4.44 45.52 0.20 -0.10 16 10 H 0.10 0.08 7.67 -2.39 -0.02 0.06 16 11 C -0.13 0.55 7.29 31.12 0.23 0.78 16 12 C -0.08 0.22 3.63 -11.01 -0.04 0.18 16 13 H 0.10 -0.20 6.58 -2.39 -0.02 -0.22 16 14 C -0.07 0.03 5.29 -19.84 -0.11 -0.07 16 15 C -0.05 -0.09 6.31 22.32 0.14 0.05 16 16 Cl -0.08 -0.15 27.16 -2.72 -0.07 -0.23 16 17 C -0.12 -0.04 9.83 22.29 0.22 0.18 16 18 C -0.12 0.25 10.05 22.26 0.22 0.47 16 19 C -0.12 0.36 10.05 22.27 0.22 0.59 16 20 C -0.11 0.30 8.61 22.27 0.19 0.49 16 21 C -0.14 0.37 7.26 31.12 0.23 0.60 16 22 S 0.11 -0.02 20.59 -56.49 -1.16 -1.19 16 23 H 0.39 -2.74 8.70 -74.05 -0.64 -3.38 16 24 H 0.12 0.04 7.96 -2.38 -0.02 0.02 16 25 H -0.27 -1.00 7.11 99.48 0.71 -0.30 16 26 H -0.27 -1.31 7.11 99.48 0.71 -0.61 16 27 H 0.18 0.45 8.06 -2.91 -0.02 0.43 16 28 H 0.42 -2.21 8.83 -92.71 -0.82 -3.02 16 29 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 30 H 0.11 -0.61 7.72 -2.39 -0.02 -0.63 16 31 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 32 H 0.15 -0.92 8.06 -2.91 -0.02 -0.94 16 33 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 34 H 0.15 -0.96 6.67 -2.91 -0.02 -0.98 16 35 H 0.10 -0.45 6.32 -2.38 -0.02 -0.47 16 36 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 Total: 0.00 -12.92 330.92 -0.82 -13.75 By element: Atomic # 1 Polarization: -11.55 SS G_CDS: -0.29 Total: -11.84 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: 4.25 Total: 6.67 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: -3.76 Total: -6.35 kcal Atomic # 8 Polarization: -0.27 SS G_CDS: -1.92 Total: -2.18 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: 2.13 Total: 1.37 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -1.16 Total: -1.19 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -0.07 Total: -0.23 kcal Total: -12.92 -0.82 -13.75 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10565094_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.740 kcal (2) G-P(sol) polarization free energy of solvation -12.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.746 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds